mRNA_P-wetherbeei_contig14687.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14687.1.1
Unique NamemRNA_P-wetherbeei_contig14687.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: UPI001F361396 (glycosyltransferase family 2 protein n=1 Tax=Sideroxydans sp. MIZ01 TaxID=2764705 RepID=UPI001F361396)

HSP 1 Score: 122 bits (307), Expect = 4.180e-32
Identity = 63/116 (54.31%), Postives = 74/116 (63.79%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALGYRPHTPAPDGQPVYYPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLAS 348
            ED AR FPS   ++ K  G R    A   QP+ +PDWVAGMFML    V R VGGFDE YFLYYEDVDLCARL   G +V +C   SV+H A+R S +NLRY   H+ S  RF +S
Sbjct:  124 EDSARRFPSPLEIIRKIFGGRSAIQADIRQPISHPDWVAGMFMLFPQRVFRKVGGFDERYFLYYEDVDLCARLTLAGYRVILCFMASVVHDARRSSHKNLRYMRLHLASVLRFFSS 239          
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: A0A536XV99_9PROT (Glycosyltransferase family 2 protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XV99_9PROT)

HSP 1 Score: 122 bits (305), Expect = 1.050e-31
Identity = 59/117 (50.43%), Postives = 77/117 (65.81%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALGYRPHTPAPDGQPVYYPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLASR 351
            ED AR FP++ +L+AKALG  P      G+    PDWV GMFMLL      +VGGFD  Y+LYYEDVDLCARLR  G  + +    S +H A+R+SRR+++Y  WH+RS  R++ SR
Sbjct:  135 EDSARPFPTLSSLVAKALGAEPQRYYEIGEESISPDWVGGMFMLLRREAFAAVGGFDARYYLYYEDVDLCARLRLAGYDIRLVPRVSAVHLARRQSRRDIKYLVWHLRSMIRYILSR 251          
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: A0A2N2VH90_9PROT (Glycosyl transferase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A2N2VH90_9PROT)

HSP 1 Score: 119 bits (297), Expect = 1.370e-30
Identity = 61/117 (52.14%), Postives = 68/117 (58.12%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALGYRPHTPAPDGQPVYYPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLASR 351
            ED AR FPS  T+L K  G R  +  PD      PDWVAGMFML  S     VGGFDE YFLYYED D+CARL   G  V  C    V+H A+R+S R LRY  WH+ S  RF   R
Sbjct:  124 EDSARPFPSPITVLKKLFGNRAASLYPDDAVPGTPDWVAGMFMLFDSKAFAQVGGFDEGYFLYYEDADICARLSRAGWPVVYCKAAEVVHDARRDSHRKLRYLKWHLGSMLRFFIKR 240          
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: A0A537BHT8_9PROT (Glycosyltransferase family 2 protein n=2 Tax=Bacteria TaxID=2 RepID=A0A537BHT8_9PROT)

HSP 1 Score: 118 bits (296), Expect = 1.980e-30
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALGYRPHTPAPDGQPVYYPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLASR 351
            ED AR FP++ +L+ KALG  P      G+    PDWV GMFMLL      +VGGFD  Y LYYEDVDLCARLR  G  + +    S +H A+R+SRR++RY  WH+ S  R++ SR
Sbjct:  127 EDSARPFPTLSSLVGKALGAAPERYYEIGEESISPDWVGGMFMLLRRDAFAAVGGFDARYHLYYEDVDLCARLRLAGYDIRLVPSVSAVHLARRQSRRDIRYLVWHLHSMIRYILSR 243          
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: A0A1J5BQ56_9BURK (Glycosyl transferase n=2 Tax=unclassified Comamonadaceae TaxID=83494 RepID=A0A1J5BQ56_9BURK)

HSP 1 Score: 118 bits (295), Expect = 3.130e-30
Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALGYRPHTPAPDGQPVYYPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLAS 348
            ED AR FP+   +L+K  G         G+ +  PDWV GMFML +  V + + GFDE YFLYYEDVDLC RL+  G +VAVCTG  V+H AQR S R+L++  WH+ S  RF  S
Sbjct:  132 EDSARRFPTPSVILSKVFGQCKQVDYSFGEQLIEPDWVGGMFMLFACQVFQQLHGFDERYFLYYEDVDLCGRLQLTGYRVAVCTGIKVVHHAQRSSHRSLKFLRWHLASMLRFFFS 247          
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: A0A1G0BGT6_9PROT (Glycosyl transferase n=1 Tax=Gallionellales bacterium GWA2_55_18 TaxID=1798244 RepID=A0A1G0BGT6_9PROT)

HSP 1 Score: 117 bits (294), Expect = 4.630e-30
Identity = 62/117 (52.99%), Postives = 71/117 (60.68%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALG-YRPHTPAPDGQPVYYPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLAS 348
            ED AR FP+ F +  KA G  R    A    P++ PDWV GMFML    +   +GGFD+ YFLYYEDVDLCARLR  G + AVC    V H AQR S RN RY  WH+RS  RF  S
Sbjct:  132 EDSARRFPTPFRIFCKAFGGCRGSDYAVKDAPIH-PDWVGGMFMLFPRSIFERLGGFDQRYFLYYEDVDLCARLRLMGYEAAVCPQARVTHHAQRSSHRNFRYLRWHLRSMTRFFLS 247          
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: A0A1F9II13_9DELT (Glycosyl transferase n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8 TaxID=1797882 RepID=A0A1F9II13_9DELT)

HSP 1 Score: 117 bits (292), Expect = 8.400e-30
Identity = 63/121 (52.07%), Postives = 71/121 (58.68%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALGYRPHTPAPDGQPVY-----YPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLAS 348
            ED AR FP+ F +  KA G        DG  V      +PDWV GMFML    +   +GGFD  YFLYYEDVD+CARLR  G +VAV  G  VIH AQR S RN RY  WH+RS  RF  S
Sbjct:  132 EDSARRFPTPFRIFCKAFGG-----CKDGDYVVKNAPIHPDWVGGMFMLFPRGIFERLGGFDRRYFLYYEDVDICARLRLTGYKVAVSPGARVIHHAQRSSHRNFRYLRWHLRSMTRFFLS 247          
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: A0A536W2G6_9PROT (Glycosyltransferase family 2 protein n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536W2G6_9PROT)

HSP 1 Score: 116 bits (290), Expect = 1.460e-29
Identity = 57/116 (49.14%), Postives = 73/116 (62.93%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALGYRPHTPAPDGQPVYYPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLAS 348
            ED AR FP++ +L+ KALG  P      G     PDW+ GMFMLL      +VGGFD  Y LYYEDVDLCARLR  G  + +    SV+H A+R+SRR++RY  WH+ S  R++ S
Sbjct:  124 EDSARPFPTLSSLVCKALGAEPKRYYEIGDESISPDWIGGMFMLLRRDAFAAVGGFDARYHLYYEDVDLCARLRLAGYDIRLVPSASVVHLARRQSRRDIRYLLWHLCSMTRYILS 239          
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: A0A2X0QXS6_9PROT (Uncharacterized protein n=2 Tax=Candidatus Nitrotoga fabula TaxID=2182327 RepID=A0A2X0QXS6_9PROT)

HSP 1 Score: 116 bits (290), Expect = 1.870e-29
Identity = 58/116 (50.00%), Postives = 71/116 (61.21%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALGYRPHTPAPDGQPVYYPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLAS 348
            ED AR FP+   +L KA+G       P      +PDWV GMFML    + +  GGF+E YFLYYEDVDLCARL+ KG ++A+C    VIH A R SR N RY  WH+ S  RF +S
Sbjct:  132 EDSARRFPTPLKILCKAVGGCKGNDYPINIDQVFPDWVGGMFMLFPRSIYKLSGGFNEQYFLYYEDVDLCARLKLKGYKIALCPKARVIHFAHRSSRHNFRYLKWHLTSMMRFFSS 247          
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Match: A0A3E1DCP8_9PROT (Uncharacterized protein n=1 Tax=Candidatus Nitrotoga sp. SPKER TaxID=2184312 RepID=A0A3E1DCP8_9PROT)

HSP 1 Score: 116 bits (290), Expect = 2.180e-29
Identity = 59/117 (50.43%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    1 EDHARDFPSVFTLLAKALGY-RPHTPAPDGQPVYYPDWVAGMFMLLSSPVLRSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNLRYAAWHMRSAARFLAS 348
            ED AR FP+   +  KA G  +      +  P++ PDWV GMFML    V + +GGFD+ YFLYYEDVDLCARLR KG +VA+C    VIH A+R S +NL+Y  WH+ S  RF  S
Sbjct:  132 EDSARRFPTPLKIFCKAFGRCKGSDYLVEDNPIF-PDWVGGMFMLFPREVFKKLGGFDQRYFLYYEDVDLCARLRLKGYEVAICPDAKVIHLARRSSHQNLQYLKWHLISMMRFFCS 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14687.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F3613964.180e-3254.31glycosyltransferase family 2 protein n=1 Tax=Sider... [more]
A0A536XV99_9PROT1.050e-3150.43Glycosyltransferase family 2 protein n=1 Tax=Betap... [more]
A0A2N2VH90_9PROT1.370e-3052.14Glycosyl transferase n=2 Tax=unclassified Betaprot... [more]
A0A537BHT8_9PROT1.980e-3049.57Glycosyltransferase family 2 protein n=2 Tax=Bacte... [more]
A0A1J5BQ56_9BURK3.130e-3050.00Glycosyl transferase n=2 Tax=unclassified Comamona... [more]
A0A1G0BGT6_9PROT4.630e-3052.99Glycosyl transferase n=1 Tax=Gallionellales bacter... [more]
A0A1F9II13_9DELT8.400e-3052.07Glycosyl transferase n=1 Tax=Deltaproteobacteria b... [more]
A0A536W2G6_9PROT1.460e-2949.14Glycosyltransferase family 2 protein n=4 Tax=Betap... [more]
A0A2X0QXS6_9PROT1.870e-2950.00Uncharacterized protein n=2 Tax=Candidatus Nitroto... [more]
A0A3E1DCP8_9PROT2.180e-2950.43Uncharacterized protein n=1 Tax=Candidatus Nitroto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14687contigP-wetherbeei_contig14687:21..407 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1198232.CYCME_0459
Model size387
Max annot lvl72273|Thiotrichales
KEGG koko:K07011
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.88e-30
EggNOG OGsCOG1216@1|root,COG1216@2|Bacteria,1NG6M@1224|Proteobacteria,1S851@1236|Gammaproteobacteria,462EQ@72273|Thiotrichales
DescriptionGlycosyltransferase like family 2
Cds size387
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186030.1774435-CDS-P-wetherbeei_contig14687:20..4071683186030.1774435-CDS-P-wetherbeei_contig14687:20..407Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14687 21..407 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14687.1.1prot_P-wetherbeei_contig14687.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14687 21..407 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14687.1.1

>prot_P-wetherbeei_contig14687.1.1 ID=prot_P-wetherbeei_contig14687.1.1|Name=mRNA_P-wetherbeei_contig14687.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp
EDHARDFPSVFTLLAKALGYRPHTPAPDGQPVYYPDWVAGMFMLLSSPVL
RSVGGFDEHYFLYYEDVDLCARLRDKGLQVAVCTGTSVIHAAQRESRRNL
RYAAWHMRSAARFLASRPAIALGLRAKR*
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mRNA from alignment at P-wetherbeei_contig14687:21..407+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14687.1.1 ID=mRNA_P-wetherbeei_contig14687.1.1|Name=mRNA_P-wetherbeei_contig14687.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=387bp|location=Sequence derived from alignment at P-wetherbeei_contig14687:21..407+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGATCACGCCAGGGATTTCCCGAGTGTCTTCACCTTGCTGGCGAAGGC GCTCGGGTACAGGCCGCATACGCCCGCCCCCGATGGCCAGCCGGTGTACT ACCCCGACTGGGTGGCCGGCATGTTCATGCTCCTGAGTTCCCCGGTGCTG CGCTCGGTCGGCGGATTCGACGAGCACTACTTCCTGTACTACGAGGACGT CGACCTCTGCGCGAGGCTCCGCGACAAGGGACTTCAGGTCGCGGTGTGCA CGGGGACTTCGGTGATCCACGCAGCCCAGCGCGAAAGCCGCCGCAACCTG CGCTACGCCGCGTGGCACATGCGCAGCGCTGCACGTTTCCTCGCGTCCCG GCCAGCCATTGCGCTCGGCCTGCGGGCGAAGCGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14687:21..407+

>mRNA_P-wetherbeei_contig14687.1.1 ID=mRNA_P-wetherbeei_contig14687.1.1|Name=mRNA_P-wetherbeei_contig14687.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=387bp|location=Sequence derived from alignment at P-wetherbeei_contig14687:21..407+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGATCACGCCAGGGATTTCCCGAGTGTCTTCACCTTGCTGGCGAAGGC
GCTCGGGTACAGGCCGCATACGCCCGCCCCCGATGGCCAGCCGGTGTACT
ACCCCGACTGGGTGGCCGGCATGTTCATGCTCCTGAGTTCCCCGGTGCTG
CGCTCGGTCGGCGGATTCGACGAGCACTACTTCCTGTACTACGAGGACGT
CGACCTCTGCGCGAGGCTCCGCGACAAGGGACTTCAGGTCGCGGTGTGCA
CGGGGACTTCGGTGATCCACGCAGCCCAGCGCGAAAGCCGCCGCAACCTG
CGCTACGCCGCGTGGCACATGCGCAGCGCTGCACGTTTCCTCGCGTCCCG
GCCAGCCATTGCGCTCGGCCTGCGGGCGAAGCGCTGA
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