mRNA_P-wetherbeei_contig14651.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14651.1.1
Unique NamemRNA_P-wetherbeei_contig14651.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: UPI001BA704A9 (hypothetical protein n=1 Tax=Kutzneria sp. CA-103260 TaxID=2802641 RepID=UPI001BA704A9)

HSP 1 Score: 63.5 bits (153), Expect = 8.930e-10
Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 1
Query:   13 FTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVIVPPGSATELPHLVHPKPRVAFARALALFFPERAVRPGSHPTAEISP 321
            +TLAELAS +GAE        ++ P   +      L F  NA+ LR      VGA+I+PPG   + PHL    PR+AFAR L L+     +  G H TA I P
Sbjct:    3 WTLAELASVIGAEAVSSPGFVVTRPVPADSDDPAGLAFCANAKYLRQALAHGVGALILPPGLDADRPHLRCADPRLAFARFLELYRRPLPLAAGVHATAVIDP 105          
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: A0A3M1WJI7_9BACT (UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1WJI7_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 1.340e-9
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 1
Query:    7 STFTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVIVPPGSATELPHLVHPK-PRVAFARALALFFPERAVRPGSHPTAEISPE 324
            ST T+ ++A+A+G  + G A + I+G  ++   G   L F+E+ RQ+        G VIVP     E   L+  K P++AFA+A+ LF+P +    G HPTA I+P+
Sbjct:    6 STKTVQQIATAIGGRVIGDASVIIAGVASLHSAGPTDLTFIESERQMEEAQMSSAGCVIVPETVTWEARSLIQVKHPKLAFAKAITLFYPPKRPPQGVHPTAIIAPD 112          
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: A0A2N9NU03_9BACT (UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2N9NU03_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 1.140e-8
Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 1
Query:   10 TFTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVIVPPGSATELPHLVH-PKPRVAFARALALFFPERAVRPGSHPTA 309
            +FT AE+A+ +G E+ G   L I+G    +    G L F EN    +        A+I+    A+E   L+  P  RVAFA+AL LFFPE    PG HPTA
Sbjct:    2 SFTAAEIATLIGGEVLGDPSLVITGFAPADRARPGDLTFAENESYFKRAEQSAASAIIIDGPFASERKVLIRVPNARVAFAKALPLFFPETTFAPGIHPTA 102          
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: UPI001D06920A (UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase n=2 Tax=Marinobacter TaxID=2742 RepID=UPI001D06920A)

HSP 1 Score: 62.0 bits (149), Expect = 2.170e-8
Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 1
Query:   10 TFTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVIVPPG----SATELPHLVHPKPRVAFARALALFFPERAVRPGSHPTAEISP 321
            T+TL E+A+ALGAEL G  D+ + G   ++  G G L F+ N    R LA  +  AVIV P     SAT +  L+   P + +AR    F P     PG HP+A + P
Sbjct:    5 TYTLGEIAAALGAELQGDPDVRVEGLATLQAAGPGQLSFLANPAYARYLADTRASAVIVAPAMAEKSATNV--LLLDNPYLGYARLSHWFDPAPVAPPGVHPSAVVDP 110          
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: A0A7V5RZ07_9BACT (UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V5RZ07_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 5.520e-8
Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 1
Query:    4 MSTFTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVIVPPGSA----TELPHLVHPKPRVAFARALALFFPERAVRPGSHPTAEISPE 324
            M+T+ LA+LA  +     G A+L I+    +E+  +G L F E+AR+L+        A++  P       T    L+HP PR+A+A+ LAL+ P +   PG HPTA +  E
Sbjct:    1 MATYKLAQLAEQVQGVARGDAELVITAVGGVEDVPAGGLTFAEDARRLQEALASPAAAILTKPNLTIPPDTGKSFLLHPMPRLAWAKILALYSPFQTPEPGVHPTAIVGAE 111          
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: A0A3M2B7E5_9BACT (UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A3M2B7E5_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 7.720e-8
Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 1
Query:    4 MSTFTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVI------VPPGSATELPHLVHPKPRVAFARALALFFPERAVRPGSHPT 306
            M+T++LA+LA  +   + G  +L+I     IEE  +G L F E+AR+L+        A++      +PP S      L+HP PR+A+A+ LAL+ P +   PG HPT
Sbjct:   11 MATYSLAQLAEQVQGVVRGDPELSIGTVGGIEEVSAGGLTFAEDARRLQDALASPAAAILTKPNLPIPPDSGKSF--LLHPAPRLAWAKILALYSPFQTPEPGVHPT 115          
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: A0A2D5PAQ9_9GAMM (UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2D5PAQ9_9GAMM)

HSP 1 Score: 60.1 bits (144), Expect = 1.030e-7
Identity = 43/104 (41.35%), Postives = 56/104 (53.85%), Query Frame = 1
Query:   13 FTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVIVPPGSATELPH--LVHPKPRVAFARALALFFPERAVRPGSHPTAEIS 318
            FTLAELAS +GAEL G     ISG   +++ G   + F+ NA     LA  +  AVIV P +A ++    LV   P + FA+   LF     V PG HPTA I+
Sbjct:    5 FTLAELASHIGAELRGEGSTQISGVNTLKDAGRSEVSFLANASYRSQLAQTQAAAVIVNPDAAADVSGAALVLANPYLGFAQVTQLFDNRPPVSPGIHPTAVIA 108          
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: A0A0P7Z8Z5_9GAMM (UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Marinobacter excellens HL-55 TaxID=1305731 RepID=A0A0P7Z8Z5_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 1.400e-7
Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 1
Query:    4 MSTFTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVIVPPGSATELPH--LVHPKPRVAFARALALFFPERAVRPGSHPTAEISP 321
            M +++L ELA ALGAEL G  D  I G   ++  G G + F+ N    + L   K  AVIV P +A ++    L+   P + +AR    F P  AV  G HPTA I P
Sbjct:    3 MKSYSLQELAEALGAELKGDPDTRIHGLATLQAAGPGSISFLANPAYGKYLKETKASAVIVAPSAAGDVQTNVLLLANPYLGYARLSHWFDPAPAVMAGVHPTAVIDP 110          
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: UPI00140A4576 (UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase n=1 Tax=Marinobacter caseinilyticus TaxID=2692195 RepID=UPI00140A4576)

HSP 1 Score: 59.3 bits (142), Expect = 1.920e-7
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 1
Query:    7 STFTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVIVPPGSA--TELPHLVHPKPRVAFARALALFFPERAVRPGSHPTAEISP 321
            S++TL ++A ALGAEL G     ISG   ++  G G L F+ N   +R L+     AVI+ P  A  T+   L+   P + +AR    F P     PG HP+A I P
Sbjct:    4 SSYTLGDIAEALGAELKGDPGCVISGLATLQAAGPGQLSFLANPSYVRYLSNSHASAVILSPSMAEHTQTNVLLLDNPYLGYARLSHWFDPSPVAMPGIHPSAVIDP 110          
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Match: A0A7C5CL77_9GAMM (UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C5CL77_9GAMM)

HSP 1 Score: 58.9 bits (141), Expect = 2.650e-7
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 1
Query:   10 TFTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRGLAPEKVGAVIVPPGSATELP--HLVHPKPRVAFARALALFFPERAVRPGSHPTA 309
            T +L ELA  LG EL G  +L I G   +++ G G L F+ + +    L   + GAVI+ P      P   +V   P++A+ARALA+ +PE    PG  P+A
Sbjct:    6 TISLHELAERLGGELRGDGELLIGGVAELDQAGPGELAFLAHRKYRPKLRETRAGAVILSPAEVEHCPVAAVVVTNPQLAWARALAVLYPEHRPAPGVAPSA 107          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14651.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001BA704A98.930e-1039.81hypothetical protein n=1 Tax=Kutzneria sp. CA-1032... [more]
A0A3M1WJI7_9BACT1.340e-936.45UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=... [more]
A0A2N9NU03_9BACT1.140e-839.60UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=... [more]
UPI001D06920A2.170e-838.89UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltran... [more]
A0A7V5RZ07_9BACT5.520e-835.14UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=... [more]
A0A3M2B7E5_9BACT7.720e-836.45UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=... [more]
A0A2D5PAQ9_9GAMM1.030e-741.35UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=... [more]
A0A0P7Z8Z5_9GAMM1.400e-738.89UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=... [more]
UPI00140A45761.920e-737.38UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltran... [more]
A0A7C5CL77_9GAMM2.650e-737.25UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14651contigP-wetherbeei_contig14651:530..994 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1121861.KB899918_gene3308
Preferred namelpxD
PFAMsHexapep,LpxD
Model size465
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00039,RC00166
KEGG koko:K02536
KEGG ReactionR04550
KEGG Pathwayko00540,ko01100,map00540,map01100
KEGG ModuleM00060
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.68e-11
EggNOG OGsCOG1044@1|root,COG1044@2|Bacteria,1MUX6@1224|Proteobacteria,2TS8U@28211|Alphaproteobacteria,2JPQ0@204441|Rhodospirillales
EC2.3.1.191
DescriptionCatalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Cds size462
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01005
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186028.925387-CDS-P-wetherbeei_contig14651:529..9911683186028.925387-CDS-P-wetherbeei_contig14651:529..991Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14651 530..991 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186028.935227-UTR-P-wetherbeei_contig14651:991..9941683186028.935227-UTR-P-wetherbeei_contig14651:991..994Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14651 992..994 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14651.1.1prot_P-wetherbeei_contig14651.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14651 530..991 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14651.1.1

>prot_P-wetherbeei_contig14651.1.1 ID=prot_P-wetherbeei_contig14651.1.1|Name=mRNA_P-wetherbeei_contig14651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
MSTFTLAELASALGAELCGPADLAISGPCAIEEPGSGLLGFVENARQLRG
LAPEKVGAVIVPPGSATELPHLVHPKPRVAFARALALFFPERAVRPGSHP
TAEISPEAVVDPSAEIGPFCTVGAGAHIGAQTRLVARVSVGERAEIGSHC
ELFP
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mRNA from alignment at P-wetherbeei_contig14651:530..994-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14651.1.1 ID=mRNA_P-wetherbeei_contig14651.1.1|Name=mRNA_P-wetherbeei_contig14651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig14651:530..994- (Phaeothamnion wetherbeei SAG_119_79)
GCCATGTCCACTTTCACCCTCGCCGAACTGGCTTCAGCTCTAGGCGCCGA GCTCTGCGGCCCGGCCGATCTCGCGATCTCGGGCCCGTGCGCTATCGAGG AACCGGGCTCGGGCCTGTTGGGCTTCGTGGAGAATGCGCGCCAGCTCCGC GGCCTCGCCCCTGAGAAGGTGGGGGCCGTCATTGTCCCACCCGGCTCCGC GACGGAATTGCCCCATCTCGTGCACCCCAAGCCCCGCGTGGCGTTCGCGC GAGCGCTCGCGCTCTTCTTTCCCGAGCGAGCAGTCCGGCCCGGCTCCCAT CCGACGGCTGAGATTTCCCCTGAGGCCGTCGTCGATCCGAGTGCGGAAAT TGGGCCCTTTTGCACAGTAGGCGCGGGCGCACACATCGGTGCCCAAACAC GCCTGGTTGCTCGAGTGAGCGTGGGGGAACGGGCGGAAATCGGCTCGCAT TGTGAGCTGTTTCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14651:530..994-

>mRNA_P-wetherbeei_contig14651.1.1 ID=mRNA_P-wetherbeei_contig14651.1.1|Name=mRNA_P-wetherbeei_contig14651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig14651:530..994- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCACTTTCACCCTCGCCGAACTGGCTTCAGCTCTAGGCGCCGAGCT
CTGCGGCCCGGCCGATCTCGCGATCTCGGGCCCGTGCGCTATCGAGGAAC
CGGGCTCGGGCCTGTTGGGCTTCGTGGAGAATGCGCGCCAGCTCCGCGGC
CTCGCCCCTGAGAAGGTGGGGGCCGTCATTGTCCCACCCGGCTCCGCGAC
GGAATTGCCCCATCTCGTGCACCCCAAGCCCCGCGTGGCGTTCGCGCGAG
CGCTCGCGCTCTTCTTTCCCGAGCGAGCAGTCCGGCCCGGCTCCCATCCG
ACGGCTGAGATTTCCCCTGAGGCCGTCGTCGATCCGAGTGCGGAAATTGG
GCCCTTTTGCACAGTAGGCGCGGGCGCACACATCGGTGCCCAAACACGCC
TGGTTGCTCGAGTGAGCGTGGGGGAACGGGCGGAAATCGGCTCGCATTGT
GAGCTGTTTCCG
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