mRNA_P-wetherbeei_contig14358.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14358.2.1
Unique NamemRNA_P-wetherbeei_contig14358.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A6H5KCR2_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCR2_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.770e-34
Identity = 63/101 (62.38%), Postives = 83/101 (82.18%), Query Frame = 1
Query:    1 DLPKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKISEAEKAALAAKAXXXXXXXAQKGGGGLNPVAVFLMILAIALGGY 303
            D PKVYDV+SYL DHPGG+EVM+EVAG+DAT+MFEDIGHSS+ART MKKF IG+LK+++ E+A +A +A       A + GGGLNP+AV +++LAI++G Y
Sbjct:   35 DTPKVYDVSSYLNDHPGGAEVMMEVAGQDATNMFEDIGHSSDARTEMKKFQIGLLKLTDEERAKIAQEAAKKAER-ASRQGGGLNPLAVLVLLLAISIGYY 134          
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A7S2R750_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R750_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.630e-26
Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 1
Query:    7 PKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKISEAEKAALAAKAXXXXXXXAQKGGGGLNPVAVFLMILAIALGGY 303
            PKVYD+T YL+DHPGG+EV+L++AG+DA + FEDIGHSS+AR  +K++LIG LKI EAE A  AA A       A+   GG N V + + ILAIA G Y
Sbjct:   78 PKVYDITKYLDDHPGGAEVLLDLAGQDADEFFEDIGHSSDARDELKRYLIGALKIDEAELARRAAAAEAKAKKEAE---GGSNLVFILIAILAIAFGYY 173          
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A7S1UHH4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHH4_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.320e-23
Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 1
Query:    7 PKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKISEAEKAALAAKAXXXXXXXAQKGGGGLNPVAVFLMILAIALGGY 303
            PKVYDV+ YLE HPGGS+V+ +VAGEDA + FED+GHS EAR  M+K+L+G L ++E EKAA+ AK          K  GG+N + + + ++AIA+G Y
Sbjct:   35 PKVYDVSKYLESHPGGSDVIEDVAGEDADESFEDMGHSEEARNIMRKYLVGTLFLTEEEKAAMEAKKAKA------KSSGGMN-IMMLIALIAIAIGVY 126          
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A7S3V505_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V505_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 7.140e-23
Identity = 52/97 (53.61%), Postives = 71/97 (73.20%), Query Frame = 1
Query:    7 PKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKISEAE--KAALAAKAXXXXXXXAQKGGGGLNPVAVFLMILAIA 291
            PKVYDVT+YL+DHPGG+EV+L+V+G+D+ + FEDIGHS +AR  ++K L+GVLK+ EAE  + A AA+A       A K GGG   + +  +ILAIA
Sbjct:   35 PKVYDVTTYLDDHPGGAEVLLDVSGQDSDEFFEDIGHSKDAREELEKLLVGVLKLDEAEIQRRAEAAQAA------ADKAGGGSTFIVLIGIILAIA 125          
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A7S2U5A0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5A0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 7.500e-23
Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:    7 PKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKISEAEKAALAAKAXXXXXXXAQKGGGGLNPVAVFLM-ILAIALGGY 303
            PKVYD+TSYL+DHPGG+EVML+V+G+D  + FEDIGHS++AR  +KK+LIG LK+ EA  A     A        Q+G GG   + V L+ ILA+ +G Y
Sbjct:   25 PKVYDITSYLDDHPGGAEVMLDVSGQDGDEFFEDIGHSNDAREELKKYLIGTLKVDEATLARNLELAKRK-----QEGAGGSGQMMVLLIAILALIIGYY 119          
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A7S1E0H8_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E0H8_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.040e-22
Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 1
Query:    7 PKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKISEAEKAALAAKAXXXXXXXAQKGGGGLNPVAVFLMILAIALG 297
            PKVYDVT YL+DHPGG+EVML+VAG+DA + FEDIGHS++AR  +K+ LIG L + +A KA + A A        +K  G L+PV + +++  +A+G
Sbjct:   35 PKVYDVTKYLDDHPGGAEVMLDVAGQDADEFFEDIGHSADAREELKRHLIGDLLMDDATKAKMKADAEKAL----KKKEGSLSPVLMIVLVAILAIG 127          
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A7S3P723_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P723_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.470e-22
Identity = 53/95 (55.79%), Postives = 63/95 (66.32%), Query Frame = 1
Query:    7 PKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKISEAEKAALAAKAXXXXXXXAQKGGGGLNPVAVFLMILAIA 291
            P VYDVT YL+DHPGG+EVML+VAG+DA + FEDIGHS EAR  +KK+LIG LKI EA K     K        A   GGG   V +  +ILA+A
Sbjct:   36 PMVYDVTKYLDDHPGGAEVMLDVAGQDADEFFEDIGHSKEAREELKKYLIGSLKIDEATK----KKMEEEKARKAAAKGGGFPLVPLVGIILAVA 126          
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A1E7F1Z9_9STRA (Cytochrome b5 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F1Z9_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 6.980e-21
Identity = 47/95 (49.47%), Postives = 68/95 (71.58%), Query Frame = 1
Query:   10 KVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKISEAEKAALAAKAXXXXXXXAQKGGGGLNPVAVFLMILAIAL 294
            KVYDV+ YL+DHPGG+EVML+V+G++A + FEDIGHS +AR  +KK+LIG  K+SE E   L  +A       AQ+GGG  +P+ + +++  IA+
Sbjct:   39 KVYDVSKYLDDHPGGAEVMLDVSGQNADEFFEDIGHSGDARKELKKYLIGTYKLSEEEIEKLKIEAEKR----AQQGGG--SPMIIIILVALIAI 127          
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A482UPL1_9ARCH (Cytochrome b5 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPL1_9ARCH)

HSP 1 Score: 88.6 bits (218), Expect = 9.100e-21
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 1
Query:    7 PKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKIS 174
            PKVYD+T YL++HPGGS+VMLEVAG+DA DMFE  GHS EAR  MKK+LIG LK+S
Sbjct:    6 PKVYDITKYLDEHPGGSDVMLEVAGKDADDMFEATGHSQEAREIMKKYLIGTLKVS 61          
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Match: A0A4D9D6Z9_9STRA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6Z9_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 9.130e-21
Identity = 50/99 (50.51%), Postives = 67/99 (67.68%), Query Frame = 1
Query:    7 PKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKFLIGVLKISEAEKAALAAKAXXXXXXXAQKGGGGLNPVAVFLMILAIALGGY 303
            PKVYDVT YLE+HPGGSEV+L+ AG+ A +MFEDIGHS +A+  +K  ++G L   + EK  LA++          KGG  LNP AV ++++AI LG Y
Sbjct:   32 PKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGELTPEDVEK--LASEKVSRASELPSKGG--LNPFAVVVLLVAIVLGLY 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14358.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCR2_9PHAE1.770e-3462.38Cytochrome b5 heme-binding domain-containing prote... [more]
A0A7S2R750_9STRA2.630e-2656.57Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1UHH4_9STRA2.320e-2351.52Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3V505_9STRA7.140e-2353.61Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2U5A0_9STRA7.500e-2352.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1E0H8_9STRA1.040e-2250.52Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S3P723_9STRA3.470e-2255.79Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A1E7F1Z9_9STRA6.980e-2149.47Cytochrome b5 n=1 Tax=Fragilariopsis cylindrus CCM... [more]
A0A482UPL1_9ARCH9.100e-2173.21Cytochrome b5 domain-containing protein n=1 Tax=ar... [more]
A0A4D9D6Z9_9STRA9.130e-2150.51Cytochrome b5 heme-binding domain-containing prote... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14358contigP-wetherbeei_contig14358:1055..1613 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FNS4
PFAMsCyt-b5,FAD_binding_2
Model size303
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.44e-35
EggNOG OGsCOG5274@1|root,KOG0537@2759|Eukaryota
Ec32 ortholog descriptionCytochrome b5-like heme/steroid binding domain
Ec32 orthologEc-01_004430.1
Descriptionheme binding
Cds size303
COG categoryCI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186019.0501716-CDS-P-wetherbeei_contig14358:1054..11891683186019.0501716-CDS-P-wetherbeei_contig14358:1054..1189Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14358 1055..1189 -
1683186019.0679626-CDS-P-wetherbeei_contig14358:1445..16131683186019.0679626-CDS-P-wetherbeei_contig14358:1445..1613Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14358 1446..1613 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14358.2.1prot_P-wetherbeei_contig14358.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14358 1055..1613 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14358.2.1

>prot_P-wetherbeei_contig14358.2.1 ID=prot_P-wetherbeei_contig14358.2.1|Name=mRNA_P-wetherbeei_contig14358.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp
DLPKVYDVTSYLEDHPGGSEVMLEVAGEDATDMFEDIGHSSEARTTMKKF
LIGVLKISEAEKAALAAKAAAKKAAKAQKGGGGLNPVAVFLMILAIALGG
Y
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mRNA from alignment at P-wetherbeei_contig14358:1055..1613-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14358.2.1 ID=mRNA_P-wetherbeei_contig14358.2.1|Name=mRNA_P-wetherbeei_contig14358.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=559bp|location=Sequence derived from alignment at P-wetherbeei_contig14358:1055..1613- (Phaeothamnion wetherbeei SAG_119_79)
GACCTCCCAAAGGTCTATGACGTGACGAGCTATTTAGAAGACCATCCGGG CGGCTCGGAGGTTATGTTGGAAGTGGCGGGAGAGGATGCGACGGACATGT TCGAAGACATTGGCCACTCATCGGAGGCACGAACGACCATGAAGAAATTC TTGATCGGCGTGCTCAAGGTGCGCCCTCGGCGGCTGTTTTTCTGACGATG TTCTTCTGGACGAGTGCTGCCATTGTACGATTGAGCTGCTGTTAGTTCTA TCAAAGTGACATGCAGTTGCTGCAGACGGGGCCAGACTGGGCATTCGTTT CTTTGTCGACTTCGTTGCCCGGCCTGTTTCTTGTGGGAAACACAAAGCTG AAATATCTTTCCCTGCTTTCCACTTGTGCGATCGCTGCGATGGGCCTGGT TGTTTGCTGCGGGCGACAAAACAGATCTCGGAGGCAGAAAAAGCAGCATT GGCTGCAAAGGCGGCGGCGAAGAAGGCGGCGAAGGCGCAGAAGGGCGGCG GCGGCCTCAACCCCGTCGCCGTCTTCCTCATGATTTTGGCGATTGCACTC GGTGGGTAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14358:1055..1613-

>mRNA_P-wetherbeei_contig14358.2.1 ID=mRNA_P-wetherbeei_contig14358.2.1|Name=mRNA_P-wetherbeei_contig14358.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig14358:1055..1613- (Phaeothamnion wetherbeei SAG_119_79)
GACCTCCCAAAGGTCTATGACGTGACGAGCTATTTAGAAGACCATCCGGG
CGGCTCGGAGGTTATGTTGGAAGTGGCGGGAGAGGATGCGACGGACATGT
TCGAAGACATTGGCCACTCATCGGAGGCACGAACGACCATGAAGAAATTC
TTGATCGGCGTGCTCAAGATCTCGGAGGCAGAAAAAGCAGCATTGGCTGC
AAAGGCGGCGGCGAAGAAGGCGGCGAAGGCGCAGAAGGGCGGCGGCGGCC
TCAACCCCGTCGCCGTCTTCCTCATGATTTTGGCGATTGCACTCGGTGGG
TAT
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