mRNA_P-wetherbeei_contig14322.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14322.1.1
Unique NamemRNA_P-wetherbeei_contig14322.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: A0A0D2LMM1_9CHLO (6-phosphofructo-2-kinase (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LMM1_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 2.800e-14
Identity = 32/66 (48.48%), Postives = 49/66 (74.24%), Query Frame = 2 
Query:  272 ALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            ALD+ID G+  GLTYA+ A++F D +  R+ DKLR ++P GESY+D+ +RLEP++L++  E   +V
Sbjct:  127 ALDEIDAGVCDGLTYAQIAERFPDEFAARKADKLRYRYPRGESYLDMIQRLEPVMLEMEREAESLV 192
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BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: A0A7S4KH62_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KH62_9EUKA)

HSP 1 Score: 79.0 bits (193), Expect = 3.380e-14
Identity = 34/86 (39.53%), Postives = 56/86 (65.12%), Query Frame = 2 
Query:  212 RDLHRTSYCRAFSCQVLELAALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            R +  + Y R    Q ++   LD+ID G+  G+TYAE    +KD + ER+ DKLR ++P GESY DV +R+EP+++++   +RP++
Sbjct:  369 RTIETSLYIRDKCAQFVKWKVLDEIDVGICDGMTYAEIEHTYKDEFEERKKDKLRYRYPRGESYEDVVKRVEPVIMEIERSRRPLL 454
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BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: A0A2Z7BNU5_9LAMI (Fructose-2,6-bisphosphatase isoform 1 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BNU5_9LAMI)

HSP 1 Score: 74.3 bits (181), Expect = 1.080e-13
Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 2 
Query:  119 G*LVLSKATQNLESRLSCGERAAFAREMAFSRDLHRTSYCRAFSCQVLELAALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            G L   K    +E RL   ERAA        R +   S    F    ++  ALD+I+ G+  G+TY E  +   + Y  R+ DKLR ++P GESY+DV +RLEP++++L  ++ PVV
Sbjct:   25 GELYAKKLANFVEKRLK-NERAASIWTSTLQRTILTASPIVGFP--KIQWRALDEINAGVCDGMTYEEIKKNMPEEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVV 138
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BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: A0A2J6LSF4_LACSA (CBM20 domain-containing protein n=10 Tax=Asteraceae TaxID=4210 RepID=A0A2J6LSF4_LACSA)

HSP 1 Score: 77.0 bits (188), Expect = 1.720e-13
Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 2 
Query:  116 DG*LVLSKATQNLESRLSCGERAAFAREMAFSRDLHRTSYCRAFSCQVLELAALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            +G L   K T  +E RL   ERAA        R +   +    F    ++  ALD+I+ G+  G+TY E  +   + Y  R+ DKLR ++P GESY+DV +RLEP++++L  ++ PVV
Sbjct:  579 NGELYAKKLTNFVEKRLK-NERAASIWTSTLQRTILTANQIAGFP--KIQWRALDEINAGVCDGMTYEEIKKNMPEEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVV 693
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BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: A0A5A7PC46_STRAF (6-phosphofructo-2-kinase/fructose-2 6-bisphosphatase n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PC46_STRAF)

HSP 1 Score: 77.0 bits (188), Expect = 1.720e-13
Identity = 50/149 (33.56%), Postives = 73/149 (48.99%), Query Frame = 2 
Query:   23 RVNGFRFLNLQKNRPDCF*GSELRRVAGQRSDG*LVLSKATQNLESRLSCGERAAFAREMAFSRDLHRTSYCRAFSCQVLELAALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            R    RFL   K+  D      L  V      G L   K    +E RL   E+AA        R +   S    F    ++  ALD+I+ G+  G+TY E  +   + Y  R+ DKLR ++P GESY+DV +RLEP++++L  ++ PVV
Sbjct:  558 RHKNMRFLACSKSPFD------LTNVLVVSDSGELYAKKLANFVEKRLK-NEKAASIWTSTLQRTILTASPIVGFP--KIQWRALDEINAGVCDGMTYEEIKKNMPEEYESRKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVV 697
[Close]
BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: D8T623_SELML (6PF2K domain-containing protein n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T623_SELML)

HSP 1 Score: 76.6 bits (187), Expect = 2.140e-13
Identity = 31/66 (46.97%), Postives = 50/66 (75.76%), Query Frame = 2 
Query:  272 ALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            ALD+I+ G+  G+TY E  ++  D Y+ R++DKLR ++P GESY+DV +RLEP++++L  ++ PVV
Sbjct:  376 ALDEINAGICDGMTYEEIGKKMPDEYLARKLDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVV 441
[Close]
BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: UPI000D62AE50 (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like isoform X3 n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62AE50)

HSP 1 Score: 76.6 bits (187), Expect = 2.230e-13
Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = 2 
Query:   95 RVAGQRS---DG*LVLSKATQNLESRLSCGERAAFAREMAFSRDLHRTSYCRAFSCQVLELAALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            R+ G  +   +G L   K T  +E RL   ERAA        R +   +    F    ++  ALD+I+ G+  G+TY E  +   + Y  R+ DKLR ++P GESY+DV +RLEP++++L  ++ PVV
Sbjct:  383 RIGGDTALSGNGELYSKKLTNFVEKRLK-NERAASIWTSTLQRTILTANQIAGFP--KVQWRALDEINAGVCDGMTYEEIKKNMPEEYESRKKDKLRFRYPRGESYLDVIQRLEPVIIELERQRAPVV 507
[Close]
BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: D8SV87_SELML (6PF2K domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SV87_SELML)

HSP 1 Score: 75.9 bits (185), Expect = 3.620e-13
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 2 
Query:  272 ALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            ALD+ID G+  G+TY E  +   D Y  R++DKLR ++P GESY+DV +RLEP++++L  ++ PVV
Sbjct:  310 ALDEIDAGICDGMTYEEIKETMPDEYQSRKLDKLRYRYPRGESYLDVIQRLEPVIVELERQRSPVV 375
[Close]
BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: UPI001C4C1699 (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like isoform X7 n=3 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C1699)

HSP 1 Score: 75.9 bits (185), Expect = 4.310e-13
Identity = 51/145 (35.17%), Postives = 78/145 (53.79%), Query Frame = 2 
Query:   38 RFLNLQKNRPDCF*GSELRRVAGQRSD-G*LVLSKATQNLESRLSCGERAAFAREMAFSRDLHRTSYCRAFSCQVLELAALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            R L+L  +R D    S+L+      S+ G L   K  + +E RL   ER A        R +   S    F    ++  AL++I+ G+  G+TYAE  +   + Y  R+ DKLR ++P GESY+DV +RLEP+L++L  ++ PVV
Sbjct:  521 RILHLP-DRTDSALISQLQECFLALSEAGELYSKKLAEFIEKRLK-SERTASIWTSTLQRTILTASPIVGFP--KIQWRALEEINAGVCDGMTYAEIKKNMPEEYESRKKDKLRYRYPRGESYLDVIQRLEPVLIELERQRAPVV 661
[Close]
BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Match: UPI001C4AC5BD (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like isoform X1 n=9 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4AC5BD)

HSP 1 Score: 75.9 bits (185), Expect = 4.380e-13
Identity = 51/145 (35.17%), Postives = 78/145 (53.79%), Query Frame = 2 
Query:   38 RFLNLQKNRPDCF*GSELRRVAGQRSD-G*LVLSKATQNLESRLSCGERAAFAREMAFSRDLHRTSYCRAFSCQVLELAALDDIDTGLATGLTYAEYAQQFKDSYIERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV 469
            R L+L  +R D    S+L+      S+ G L   K  + +E RL   ER A        R +   S    F    ++  AL++I+ G+  G+TYAE  +   + Y  R+ DKLR ++P GESY+DV +RLEP+L++L  ++ PVV
Sbjct:  605 RILHLP-DRTDSALISQLQECFLALSEAGELYSKKLAEFIEKRLK-SERTASIWTSTLQRTILTASPIVGFP--KIQWRALEEINAGVCDGMTYAEIKKNMPEEYESRKKDKLRYRYPRGESYLDVIQRLEPVLIELERQRAPVV 745
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14322.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2LMM1_9CHLO2.800e-1448.486-phosphofructo-2-kinase (Fragment) n=1 Tax=Monora... [more]
A0A7S4KH62_9EUKA3.380e-1439.53Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A2Z7BNU5_9LAMI1.080e-1336.75Fructose-2,6-bisphosphatase isoform 1 n=1 Tax=Dorc... [more]
A0A2J6LSF4_LACSA1.720e-1336.44CBM20 domain-containing protein n=10 Tax=Asteracea... [more]
A0A5A7PC46_STRAF1.720e-1333.566-phosphofructo-2-kinase/fructose-2 6-bisphosphata... [more]
D8T623_SELML2.140e-1346.976PF2K domain-containing protein n=5 Tax=Selaginell... [more]
UPI000D62AE502.230e-1335.166-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]
D8SV87_SELML3.620e-1348.486PF2K domain-containing protein n=4 Tax=Selaginell... [more]
UPI001C4C16994.310e-1335.176-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]
UPI001C4AC5BD4.380e-1335.176-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14322contigP-wetherbeei_contig14322:756..1473 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog88036.EFJ07288
PFAMs6PF2K,CBM_20,His_Phos_1
Model size470
Max annot lvl35493|Streptophyta
KEGG rclassRC00152
KEGG koko:K01103
KEGG ReactionR02731
KEGG Pathwayko00051,ko04066,ko04152,map00051,map04066,map04152
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006000,GO:0006002,GO:0006003,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0019318,GO:0019637,GO:0043609,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0065007,GO:0071704,GO:0071944,GO:1901135
Exons2
Evalue3.64e-15
EggNOG OGsCOG0406@1|root,KOG0234@2759|Eukaryota,37ME5@33090|Viridiplantae,3GGS5@35493|Streptophyta
EC2.7.1.105,3.1.3.46
Description6-phosphofructo-2-kinase fructose-2
Cds size270
COG categoryG
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186017.8413355-CDS-P-wetherbeei_contig14322:755..8421683186017.8413355-CDS-P-wetherbeei_contig14322:755..842Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14322 756..842 -
1683186017.8548555-CDS-P-wetherbeei_contig14322:1091..12741683186017.8548555-CDS-P-wetherbeei_contig14322:1091..1274Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14322 1092..1274 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186017.8658898-UTR-P-wetherbeei_contig14322:1274..14731683186017.8658898-UTR-P-wetherbeei_contig14322:1274..1473Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14322 1275..1473 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14322.1.1prot_P-wetherbeei_contig14322.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14322 756..1274 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14322.1.1

>prot_P-wetherbeei_contig14322.1.1 ID=prot_P-wetherbeei_contig14322.1.1|Name=mRNA_P-wetherbeei_contig14322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp
MAFSRDLHRTSYCRAFSCQVLELAALDDIDTGLATGLTYAEYAQQFKDSY
IERRVDKLRSKFPNGESYMDVFRRLEPLLLDLLAEQRPVV
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mRNA from alignment at P-wetherbeei_contig14322:756..1473-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14322.1.1 ID=mRNA_P-wetherbeei_contig14322.1.1|Name=mRNA_P-wetherbeei_contig14322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=718bp|location=Sequence derived from alignment at P-wetherbeei_contig14322:756..1473- (Phaeothamnion wetherbeei SAG_119_79)
CCGGTAAGTCAGCAAAGGGGAAAGGGTCAATGGATTTCGATTTCTTAATC
TACAAAAAAATAGACCTGACTGCTTTTGAGGCAGCGAGCTCCGGCGGGTG
GCCGGTCAGAGGAGCGATGGTTGATTGGTCTTATCAAAGGCAACACAAAA
TTTGGAGTCCAGGTTGAGCTGTGGTGAGCGAGCTGCATTTGCCCGTGAAA
TGGCTTTTTCTCGCGACTTGCACCGAACATCATACTGTCGAGCTTTCTCT
TGTCAGGTGCTGGAGCTGGCGGCGCTGGACGACATCGACACGGGGCTGGC
GACGGGGCTGACGTACGCCGAGTACGCCCAACAGTTCAAGGACTCTTACA
TAGAACGCCGCGTCGACAAGCTGCGGAGCAAAGTGAGGGCTGCTTTGTCC
TGCTGGGTGATTTTTTCGGTGTCTGTGTGCGTTTGGGCTGTTCCGGGAAT
GCAGGCTTTTGCGTTTGGGCTTTTGCTTCTGTTGTTCGGTTTCCTGCGTC
TCCTCATTCTGCGCTGGTGGTTTGTAAACTCTTACGCTCTCTCTTTTGCC
TGTATGACCAATATTCGTTGACCTCACGCTTTTCCATCCTCCTTTCTCTC
CCTTCGGCTGCGCGTACACGGGATACCGCAGTTCCCGAACGGTGAGAGCT
ACATGGACGTGTTCCGCCGCCTCGAGCCGCTGCTGCTTGACCTGCTGGCT
GAGCAGCGCCCCGTCGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14322:756..1473-

>mRNA_P-wetherbeei_contig14322.1.1 ID=mRNA_P-wetherbeei_contig14322.1.1|Name=mRNA_P-wetherbeei_contig14322.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig14322:756..1473- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTTTTTCTCGCGACTTGCACCGAACATCATACTGTCGAGCTTTCTC
TTGTCAGGTGCTGGAGCTGGCGGCGCTGGACGACATCGACACGGGGCTGG
CGACGGGGCTGACGTACGCCGAGTACGCCCAACAGTTCAAGGACTCTTAC
ATAGAACGCCGCGTCGACAAGCTGCGGAGCAAATTCCCGAACGGTGAGAG
CTACATGGACGTGTTCCGCCGCCTCGAGCCGCTGCTGCTTGACCTGCTGG
CTGAGCAGCGCCCCGTCGTC
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