mRNA_P-wetherbeei_contig141.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig141.1.1
Unique NamemRNA_P-wetherbeei_contig141.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.310e-36
Identity = 136/423 (32.15%), Postives = 194/423 (45.86%), Query Frame = 2
Query:  383 AAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRLRALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSL---AHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVV 1642
            A+     K+++  ++G+  A R +LD  A + LSRLIF+I QP LL VNVA+ L+ PGQ  S L ++P+FA  +I  GSLV ++   + R+             PR     S P R           L   CA                   +  + PL +          A S                A R+DPT+   AVA ISFYLLGWSPMFWT G+ +L+    PL   +S ++  ++ ++    A         L   P  +RI+SPPVLGC+ G V+G     R+L +        V ++L  LG+AY+   IL LAG+L       S VAA          ++  K E+    +  +     A+MV+     P+ A  +L      G    D +LRFVLLM+ CMPSAQNS V+
Sbjct:   87 ASASAVSKLIAVVSLGFWAADRKVLDANACSVLSRLIFFIFQPALLCVNVATTLSTPGQSLSTLGIIPLFALSQIAVGSLVGSLLLAVLRV-------------PR----ESIPGR----------ELRMSCA-------------------FGNSGPLPLL--------FADSLF--------------AGRADPTMASRAVAFISFYLLGWSPMFWTYGRNILS----PLEKSSSVEVGRDMSIKDKFWA---------LLNDPNSQRILSPPVLGCVLGAVIGSSPQLRSLFIGTAPALKPVTDALRTLGSAYVPAVILTLAGTLHQSVRSPSAVAA----------ASNDKEEK----TVSLGSRVAALMVARFLITPVTAYGMLRVCSHAGLIPADPLLRFVLLMQACMPSAQNSVVI 414          
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.110e-27
Identity = 132/487 (27.10%), Postives = 192/487 (39.43%), Query Frame = 2
Query:  383 AAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRLRALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLA----------GTPPPL----------PALASGD------------------------------LWAEIGLRQLT----------------LAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAA-TYDRMLRFVLLMEGCMPSAQNSAVV 1642
            AA      +V+ C +G   +R  +LD+ AL++LSRL++ + QP LLF NV   LA P Q    +F+LP+ A  +I+  + ++ V                                           LL+      ++ A R    V   +++  A PL +  +             L K              DPTL   AVA ISFYLL WSP+FW  G G+L           G P             P L SG                                W     +Q +                L ++A+  A+++  S   K++++PP LGC  G +VG+C+P R LL    A FS VF +L  +G+AY+   +LIL+GSLA           G  G   + F +                 +M      MP VA A + TG R G   T D +L FV+L++GCMPSAQNS ++
Sbjct:   25 AASGAVLNLVACCCLGVTASRYRVLDQQALSALSRLVYNVFQPSLLFTNVLQILATPSQARGTIFLLPLAAAVQIVTAAGISRV-------------------------------------------LLRLVGLNPFSEAGR---EVRICSTFANAGPLPLLFVD-----------ALFKN-----------HPDPTLRTRAVAFISFYLLAWSPLFWNYGYGILVDKTEDTGGKKGQPMEYSSLGTQSVGGPRLGSGTGGAGMMVNGNGSAAAMVLEEGVDGKETHATNWTSPHQQQYSRQQVPCSEGRSYPSHALVRSALEKARRVAHSRAMKKLLNPPTLGCTLGALVGVCSPLRGLLFGDTAPFSCVFSALRTMGSAYVPCVLLILSGSLAQ----------GLEGFDSNVFRRAML--------------VMFQRFCIMPAVAFACVETGKRTGLLPTQDPLLLFVILLQGCMPSAQNSVLI 419          
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A7S1TU85_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU85_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.220e-25
Identity = 84/227 (37.00%), Postives = 119/227 (52.42%), Query Frame = 2
Query:  965 DPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAAT-YDRMLRFVLLMEGCMPSAQNSAVV 1642
            DPTLLP AV  +SFYLLGWSP FWT    + A   P   A       AE G ++  L      A      SP  KR++SPP++GC++G  +        L + P A FS + +++  +G+ YL   +L+LAGS A+  S    G  G V     A  KV    +  A   +A  +I+ +    MP VA  ++    ++G  +  + +LRF+LLMEGCMPSAQNS V+
Sbjct:  154 DPTLLPAAVGYVSFYLLGWSPAFWTFASAIAATPEPKSAAKPQAVAEAEAGEKKSPLK-----AFTDWYASPWGKRMLSPPIIGCMSGLTIASVPLLSTLFLGPTAPFSPLTDAIRTIGSGYLPCVVLVLAGSFAN--SAARGGAAGEVASSWEA--KVAG--MQRARQTKALLSILCARFLIMPAVALGMMTGLTQLGLVSPTNHLLRFILLMEGCMPSAQNSVVI 369          
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A836CLT3_9STRA (Auxin efflux carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT3_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.800e-25
Identity = 80/232 (34.48%), Postives = 118/232 (50.86%), Query Frame = 2
Query:  965 DPTLLPTAVACISFYLLGWSPMFWTVG-KGMLAGTPPPL---PALASGDLWAEIGLRQLTLAQT--AVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVV 1642
            DPT+LP A+A ISF+L+GWSP FWTVG + +  G  P     PALA+G      G +         A+  AQ    SP  KRI+SPP++ C+ G  VG+ +P R LL +  A  + ++ S++ L AAY  + IL+LAGSLA+   +                       + +    +   AI ++    +P+   A+LL  ++      D  L FVL+ME  MP AQNS ++
Sbjct:  137 DPTVLPRAIAYISFFLMGWSPAFWTVGYRTLTTGIEPENEEEPALAAGSTATAAGSQXXXXXXXXQALSKAQTALASPALKRILSPPIVACLVGLTVGISSPLRWLLTDSNAPLAFLWNSIKVLAAAYTPSGILVLAGSLANAKPQN----------------------IWTKATAKKIAAISMARWLLLPIATGALLLGCVKARIVPRDPALLFVLMMEAAMPPAQNSVII 346          
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 9.090e-23
Identity = 113/444 (25.45%), Postives = 183/444 (41.22%), Query Frame = 2
Query:  368 PAVMLAAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRLRALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAG------------TPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRT---SPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVVSRQA 1654
            P V+ A+ +   +++  C +G   A++GIL    + +LS++++ I  P LL VNVA       Q  + L  +P FA  ++  G  ++ V      +R L +  D            +   R A +      M  Q+                         P + + A+ R S                           P LL   VA  SFYL+GWSP FWT+G  +L G                          A +   +L+L++       K+++   SPT +R++SPP++ C+ G V+G+  P R LL+   A    ++ +   L AAY  + +L+LAGSLA+        PPG                  S    +   A+ ++    +PL  + +L  G++ G    D ML FVLL+E CMPSAQN+ ++ + A
Sbjct:  137 PVVVKASTRAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCV--SQSVASLLPIPAFAGIQVALGLAISEVA-----MRLLRINPD------------TEAGREAKVC-----MAFQNSG---------------------ILPLIFLNAMFRGS---------------------------PELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQDGXXXXXXXXXXXXXXXXXXXVAAVPKAKLSLSKRVANLPSKVKSIAESPTVRRVLSPPIVACMMGLVIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANC-------PPGK---------------WFSRDTQKTILAVGMARWFLLPLATSGLLFGGVKYGLVPPDPMLLFVLLIESCMPSAQNTVIMLQVA 486          
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: W7TA92_9STRA (Auxin efflux carrier-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA92_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.630e-22
Identity = 112/430 (26.05%), Postives = 183/430 (42.56%), Query Frame = 2
Query:  368 PAVMLAAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRLRALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLR-----TSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVV 1642
            P V+ A+     +++ +C +G  F RRGIL R A+ +LS ++++I+ P LL VNVA  +     +   L  LP+F   +I+  S +  V  F       L+ +D + +  R                                     + RVL+        P+               A  L++              DP++LP A++ ISFYLLGW+P+FWT G  +L   P   P   S           +   ++ V  A +++        T KRI+SPP++G + G  VG+ +P   L + PRA    +  +++ +G+AY    +L+LAGSLA P    +     S     S  P ++   +C                   P +  +I+L  +  G    DR++ FVL ++ CMPSAQNS ++
Sbjct:  109 PVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPLR--TLLPLPLFGTMQILLCSCIAWVVTF-------LMGADVNSAKGR-------------------------------------QLRVLQTFGNGGVAPILF-------------ATVLLRN-----------HPDPSVLPLAISYISFYLLGWTPIFWTYGYSLLV--PAEAPTAQS-----------IAEKESVVTLADRIKYFIRHPPATIKRILSPPIVGSLGGLCVGV-SPLAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGAESKSIHPYLQIASVCLV------------RFCLCPALCLSIILRAMSTGWVKLDRLMVFVLFLQSCMPSAQNSVLM 442          
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA)

HSP 1 Score: 108 bits (269), Expect = 6.250e-21
Identity = 76/228 (33.33%), Postives = 109/228 (47.81%), Query Frame = 2
Query:  962 SDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAA-TYDRMLRFVLLMEGCMPSAQNSAVV 1642
            +DPTL P AVA ISFYL+ WSP+FWT+G  +L G+    PA A                  +     +L   P  ++ +SPP LGC+ G +VG     RA+   P A  +++F++L  +G+AYL T +L+LAGSLA     +    P  +                       T AI  +    MP  A  +L  G       + D +L FVLL++ CMP AQN+ V+
Sbjct:  245 TDPTLYPRAVAYISFYLVAWSPLFWTLGSTIL-GSSTSQPAYAKSP----------PSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALL---------------------SRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVI 440          
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A6H5JBW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW8_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 4.800e-20
Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 2
Query:  404 KVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLV 625
            K+V+SC +GY F+++GILD++A+TSLS+LIF++ QPCLLFVNVAS L  PGQK SKL VLPVFA  +I+ GS V
Sbjct:    2 KLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQILFGSAV 75          
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A7S2URC9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URC9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.050e-19
Identity = 85/233 (36.48%), Postives = 113/233 (48.50%), Query Frame = 2
Query:  968 PTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAI-----LLTGIRVGAATYDR---MLRFVLLMEGCMPSAQNSAVV 1642
            P LL    ACISFYLL WSP+FW+  + +L GT P                +  T+ +T     QK +    FK   SPPV G   G  VG+C P R     P  + S VF +L  LG+AYL  A+L+LAGSLA    K A  P G      ++  K+          P +  AIM+S     P+++  I     LL  +   A T  R   ++ FVLLMEGCMP AQN+ ++
Sbjct:  241 PALLGDVTACISFYLLAWSPLFWSFARIVL-GTIP----------------KDNTVNKTL---GQKCKGY--FKTFFSPPVAGSALGVFVGLCPPLRHAFCSPNGLLSPVFGALSTLGSAYLPAAVLVLAGSLA---GKKAPTPDGEATTTTTSNNKIS---------PASVAAIMMSRFCLAPILSFGIVKLLDLLKLLPSAAGTGARARAVVMFVLLMEGCMPPAQNTVII 439          
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A7S1ER62_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER62_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 1.300e-17
Identity = 113/436 (25.92%), Postives = 179/436 (41.06%), Query Frame = 2
Query:  356 RSERPAVMLAAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRL-------RALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVV 1642
            RS+  A+ L A     +++ +  +G    RRG+LD   L+SLS+ ++ I  P +LFVNV + L    Q    +  LP+ A  +I+ G+L+  V   + R+       R L +   F  S        + P  FA                                                                  NN+      +DPT L   +A ISF+L+GWSP+FW++G  +L+     +      +   + G R+   A         L  SP + RI +PP++G +AG V G     R L+    A   +V ++L+ LG+AY   A+L+LAGSLA P    ++    +V     ++ ++ +              I +    FMP+ A   L T   +G    D M +F +LME  MPSAQNS ++
Sbjct:  141 RSDVVAISLLA---TLRLMMTIGIGALAQRRGVLDSTVLSSLSKAVYNIFLPSILFVNVGTTLC--TQSLLSVAPLPLLALAQILFGALLGKVLCRVLRVEESSSDGRILNVSCMFGNSA-------ALPLLFA------------------------------------------------------------------NNLF----AADPTRLAPLIAGISFFLIGWSPLFWSLGYYILSAPRVTV------EKKTKQGKRERMRA---------LMKSPIWARIFAPPIIGALAGLVFGSVPFLRNLVFAKDAPLGAVVDALKTLGSAYTPCAVLVLAGSLATPQKSASSSSSAAV-----SWSRIMQ-----------IAGICIVRFIFMPIFALGTLRTTALLGILL-DPMQKFTILMESIMPSAQNSVLI 462          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2SS74_9STRA1.310e-3632.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D5S5_9STRA3.110e-2727.10Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1TU85_9STRA2.220e-2537.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A836CLT3_9STRA2.800e-2534.48Auxin efflux carrier n=1 Tax=Tribonema minus TaxID... [more]
A0A6H5KMD6_9PHAE9.090e-2325.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TA92_9STRA2.630e-2226.05Auxin efflux carrier-like protein n=2 Tax=Nannochl... [more]
W7U1P2_9STRA6.250e-2133.33Membrane transporter n=3 Tax=Monodopsidaceae TaxID... [more]
A0A6H5JBW8_9PHAE4.800e-2064.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2URC9_9STRA2.050e-1936.48Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1ER62_9RHOD1.300e-1725.92Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig141contigP-wetherbeei_contig141:652..4075 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8U0
PFAMsMem_trans
Model size2753
Max annot lvl2759|Eukaryota
KEGG koko:K07088
Hectar predicted targeting categorysignal anchor
Exons4
Evalue1.41e-17
EggNOG OGsCOG0679@1|root,KOG2722@2759|Eukaryota
Descriptionauxin efflux carrier
Cds size690
COG categoryB
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig141.1.1prot_P-wetherbeei_contig141.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig141 1955..3315 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186008.7777786-UTR-P-wetherbeei_contig141:651..19541683186008.7777786-UTR-P-wetherbeei_contig141:651..1954Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig141 652..1954 -
1683186008.8246162-UTR-P-wetherbeei_contig141:3315..40751683186008.8246162-UTR-P-wetherbeei_contig141:3315..4075Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig141 3316..4075 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186008.7860668-CDS-P-wetherbeei_contig141:1954..21891683186008.7860668-CDS-P-wetherbeei_contig141:1954..2189Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig141 1955..2189 -
1683186008.796795-CDS-P-wetherbeei_contig141:2436..25071683186008.796795-CDS-P-wetherbeei_contig141:2436..2507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig141 2437..2507 -
1683186008.8061588-CDS-P-wetherbeei_contig141:2789..29931683186008.8061588-CDS-P-wetherbeei_contig141:2789..2993Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig141 2790..2993 -
1683186008.8165722-CDS-P-wetherbeei_contig141:3135..33151683186008.8165722-CDS-P-wetherbeei_contig141:3135..3315Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig141 3136..3315 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig141.1.1

>prot_P-wetherbeei_contig141.1.1 ID=prot_P-wetherbeei_contig141.1.1|Name=mRNA_P-wetherbeei_contig141.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp
MLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAV
TLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLA
GTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPV
LGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAG
SLAHPDSKVAAGPPGSVGGGGSAFPKVER*
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mRNA from alignment at P-wetherbeei_contig141:652..4075-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig141.1.1 ID=mRNA_P-wetherbeei_contig141.1.1|Name=mRNA_P-wetherbeei_contig141.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3424bp|location=Sequence derived from alignment at P-wetherbeei_contig141:652..4075- (Phaeothamnion wetherbeei SAG_119_79)
TCCAATATGCCACCTCTGGCCGTGCGGCGCTGTTGCCGTGGCCTCGTGCC ACCGCTCGTCTTGCTTATTGCTGCGGTTGCAGTCGCGGCAACGCATGCCT TCCTGCCGAAAACCGGAGAAATTGGAGTACGGCGCAGCATTGCGGCGAGT CCGCGGCACACGGTCCCGGCCGCCGCAAACTTCGTTCCTACGGCGAAGAG ACTTCTGTTGATGTTGCGGGTCTTCGCCGCACCGCGGCCGCGCGTGCCCC GTATGATGGTTGCGGGCAAGGCCGCCGTCACTTCGCCGGGCTTCAAGGCG GCCGTGGTGACCGCCGGCGCCGCGGCCTTATCCGTGCAGCCTGCGGTCAT GCTGGCGGTCGGAAAGGCCTGCGGTGATGCTCGCGGCCGGAAAGACCGCC TTCAAGGTGGTTTCTTCGTGCGCCATGGGCTACAACTTTGCGAGACGCGG CATCCTTGACCGAGCTGCCCTGACGTCGCTCTCGCGCCTCATCTTCTACA TCGTTCAGCCGTGCCTCCTCTTCGTCAACGTCGCGTCGGCGCTCGCCATG CCAGGTCAAAAGTATTCGAAGCTGTTCGTGCTGCCCGTCTTTGCATGTCA GCGGATCATCGCCGGCAGCCTCGTCACAAACGTGTGCTGGTTTATTCAAA GGCTTCGGGCCTTATTGCTTCGAAGCGATTTCTCATTCTCCATGCCTCGC TGGCATTGATGGCCTTCATTTCCTTCCCGTTTCGCTCTGATTGTCGTGAT ATAGACATGGATGTTGTTGCAACACTGTGCCCGCAGGGTCTGGGCAAGGG CCTGGCGATTGAGGCAAAGAGTCCTGAGAGCCGCGAGCTACGAATATGCT CCTCCTTTGCAAATTCGGGCCCTCTCCCGCTCCTCTTCGCCGACAGCCTC TTCAGCAGTCACGCTGGTAAAGAAAGACAGAAATAACAATGTGAGGAACA AAGGGGAAGACTATTCTTTGTTTACTTCTCGTCTCTTTTCCTTGTGATTC TGAAACTTGTATTTGTGGAGAGCTGGAGTTTAAAGCGTCCGATTTCCGGC TCCAATTCTTTTCGACCAGTTGATTATTGCAGGTTGTGCCCTGCGCCACC CGGTCAGACCCGACGCTGCTGCCAACGGCGGTGGCATGCATTTCTTTCTA CCTGCTGGGATGGTCCCCGATGTTCTGGACCGTCGGTAAGGGGATGCTCG CCGGAACGCCACCTCCGCTGCCAGCGTTGGCAAGCGGCGATTTGTGGGCA GAAATTGGACTTCGGCAGCTGACCCTGGCGCAAACGGTGAGAAAAAGCTC GAAGTCGAATTAGATTATCGAGTCTCGATGCGGTTCCAGAAGGTATCTTT TCGCGGTGGCTTTGTACAGGGTGGATCCTTTCGAGACTCAAATCAGGTGG CGGTAGACGTGTCGGCCGACATTTGTTCTGTGCCTCTTCTCCTCTCCGTT CGCACTGGCTCTGACTCTCAAACCGAAAACGCGCCAACTGGCTGGTTATG TGTCCGGGCTGGGCATACCCTGTCCTACGGGGCGGCCATATTGGTGTGAC GATTCACGCCCGCACAAGGCGGTGGTGGCGGCGCAAAAGCTCCGCACGAG CCCGACCTTCAAGCGAATCATCAGCCCGCCTGTGCTCGGGTAAGCATCAG AGATCGAAGCGGTCCCGATAATGGCTGTGCTTTTACAGCACCTCAGTGCA TTTTAATTGCGTTGCTCTGCGATCGGCGCCCTTCCTTCGCTCTCGGCCTT TTGCTCAGCGAATGTTTTATCCGTTCCTGCACAGTATACTACAAATAAGC GACAAGATTCCTTGAAACTGCGGTCGTCTTACCCCAAAACGATAAATCCT CTCGTTCCGGGCCATGAATGATCGATAACATGACAGCTGCATCGCGGGGA CGGTGGTCGGCATGTGCGCGCCGGCGCGCGCTCTCCTCGTCGAGCCGCGC GCCATCTTCTCCTCTGTCTTCGAGTCTCTTGAAGCCCTTGGCGCCGCCTA CCTCCTGACCGCCATCCTCATTCTGGCGGGATCTCTGGCGCACCCGGACT CCAAAGTCGCCGCCGGTCCTCCGGGGAGCGTCGGCGGCGGTGGCAGCGCT TTTCCGAAGGTGGAACGCTAACCCCTTTGCTCAGCTTTCGTTCCCGAAGC GACTCGGGCGATAATGGTGTCACATATCGCGTTCATGCCACTGGTGGCGG CGGCCATACTGCTGACGGGCATCCGCGTCGGGGCGGCGACGTACGACCGT ATGCTGAGGTTCGTGTTGCTCATGGAAGGCTGCATGCCCAGTGCACAGAA CAGTGCCGTGGTGAGTAGGCAGGCATTGACATGTGTCATTTGCTGAGGTC TTCGTGGCTGCTATCTTTCTTTTCTTTTCCTTCTCTTGTGTTCTCGGTTT TATTGGGTTCCACAGTGCTGTTGTTGGCAGCAATCGCTCCAGCCTCCCGC TGACACTATTCCCGTCTGCGTTCTTCGCCTACGCCGTGACCAAGGCTCCC GTGGCTACTGCGTTTGCCACTGCCACAGATCCTTCAAATGGAGGAGAATT TCGACTTGGCGTCTTCCATGGCCCGCACCCTCATGGCGGGCGACCTCCTC TCGGCGGTGCCAATCACCACGCTACTCTCCGGGATATTACAGGCCGTGCA GCTCTGAAAACGGCTGTTAGCTGCTGTATCGCGGCGGAGAGGCTGACGGT GCTGGCGGTGGCGGCGGTGCTGATGGCATCAGAGGACAAGGAAGGCCGCG ATGCAGCGTTGGGGCACGCAAGGCGCCTTTTCGCAGCGCCCGCGGTGTAA CGGCTATCGCGGCACGGTCAACCGATGCCGCCATCCTTTATAGAGGGTTT TCCTCCCTGTATGGGCAAGGGTACGTGTGGGAGATGGCATTCCTTCCTGC TCTTGCATGCCGGTGTGGGAGGGAAGGTTGACCCACCCCCGTGGCCAGTG GGCGGAGGCAAATGGACTGGGAGCTGCTTTGCTGCAGAATCCGGGCCGCT CGCTGTCGGGGGCAACGCCAACGCGATCCGGCACGCCGGGTCGCAGCATT CAGCATGAATCGCTGCTGGCAGTAACCATGCAGTGTTCGGCAGCTTCCTC GCCGTCTGCCGCACTACAAGGCAATTCGAGAGGAGTCGCTCGCCTCCCGG ACGGGTTCGGTGCCCATCGGTCCTTAGCCGCAACAATGGAGAGGAGGGGT TGGCTGCACGGGACGTTCCTTTGTGAGGCCAAAACCGCTGGGGCGGCGAA AGTGGGGTAAAAAGGTTGGGCCTCAACGGCGAGAGCGTGCAGGATAGACG GGAACTGTCATCACATATGCCGCGTAGGAGATGGGGAAAGATAGGAATAA TTCGCGGGGGACGGTCACAGCGGCGGTGGCGATGGCGGCGGCGGTACACT TTAAAGCTGTCTTTGGTTGTTCTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig141:652..4075-

>mRNA_P-wetherbeei_contig141.1.1 ID=mRNA_P-wetherbeei_contig141.1.1|Name=mRNA_P-wetherbeei_contig141.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig141:652..4075- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTGTTGCAACACTGTGCCCGCAGGGTCTGGGCAAGGGCCTGGCGATT
GAGGCAAAGAGTCCTGAGAGCCGCGAGCTACGAATATGCTCCTCCTTTGC
AAATTCGGGCCCTCTCCCGCTCCTCTTCGCCGACAGCCTCTTCAGCAGTC
ACGCTGGTAAAGAAAGACAGAAATAACAATGTTGTGCCCTGCGCCACCCG
GTCAGACCCGACGCTGCTGCCAACGGCGGTGGCATGCATTTCTTTCTACC
TGCTGGGATGGTCCCCGATGTTCTGGACCGTCGGTAAGGGGATGCTCGCC
GGAACGCCACCTCCGCTGCCAGCGTTGGCAAGCGGCGATTTGTGGGCAGA
AATTGGACTTCGGCAGCTGACCCTGGCGCAAACGGCGGTGGTGGCGGCGC
AAAAGCTCCGCACGAGCCCGACCTTCAAGCGAATCATCAGCCCGCCTGTG
CTCGGCTGCATCGCGGGGACGGTGGTCGGCATGTGCGCGCCGGCGCGCGC
TCTCCTCGTCGAGCCGCGCGCCATCTTCTCCTCTGTCTTCGAGTCTCTTG
AAGCCCTTGGCGCCGCCTACCTCCTGACCGCCATCCTCATTCTGGCGGGA
TCTCTGGCGCACCCGGACTCCAAAGTCGCCGCCGGTCCTCCGGGGAGCGT
CGGCGGCGGTGGCAGCGCTTTTCCGAAGGTGGAACGCTAA
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