mRNA_P-wetherbeei_contig141.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.310e-36 Identity = 136/423 (32.15%), Postives = 194/423 (45.86%), Query Frame = 2
Query: 383 AAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRLRALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSL---AHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVV 1642
A+ K+++ ++G+ A R +LD A + LSRLIF+I QP LL VNVA+ L+ PGQ S L ++P+FA +I GSLV ++ + R+ PR S P R L CA + + PL + A S A R+DPT+ AVA ISFYLLGWSPMFWT G+ +L+ PL +S ++ ++ ++ A L P +RI+SPPVLGC+ G V+G R+L + V ++L LG+AY+ IL LAG+L S VAA ++ K E+ + + A+MV+ P+ A +L G D +LRFVLLM+ CMPSAQNS V+
Sbjct: 87 ASASAVSKLIAVVSLGFWAADRKVLDANACSVLSRLIFFIFQPALLCVNVATTLSTPGQSLSTLGIIPLFALSQIAVGSLVGSLLLAVLRV-------------PR----ESIPGR----------ELRMSCA-------------------FGNSGPLPLL--------FADSLF--------------AGRADPTMASRAVAFISFYLLGWSPMFWTYGRNILS----PLEKSSSVEVGRDMSIKDKFWA---------LLNDPNSQRILSPPVLGCVLGAVIGSSPQLRSLFIGTAPALKPVTDALRTLGSAYVPAVILTLAGTLHQSVRSPSAVAA----------ASNDKEEK----TVSLGSRVAALMVARFLITPVTAYGMLRVCSHAGLIPADPLLRFVLLMQACMPSAQNSVVI 414
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.110e-27 Identity = 132/487 (27.10%), Postives = 192/487 (39.43%), Query Frame = 2
Query: 383 AAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRLRALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLA----------GTPPPL----------PALASGD------------------------------LWAEIGLRQLT----------------LAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAA-TYDRMLRFVLLMEGCMPSAQNSAVV 1642
AA +V+ C +G +R +LD+ AL++LSRL++ + QP LLF NV LA P Q +F+LP+ A +I+ + ++ V LL+ ++ A R V +++ A PL + + L K DPTL AVA ISFYLL WSP+FW G G+L G P P L SG W +Q + L ++A+ A+++ S K++++PP LGC G +VG+C+P R LL A FS VF +L +G+AY+ +LIL+GSLA G G + F + +M MP VA A + TG R G T D +L FV+L++GCMPSAQNS ++
Sbjct: 25 AASGAVLNLVACCCLGVTASRYRVLDQQALSALSRLVYNVFQPSLLFTNVLQILATPSQARGTIFLLPLAAAVQIVTAAGISRV-------------------------------------------LLRLVGLNPFSEAGR---EVRICSTFANAGPLPLLFVD-----------ALFKN-----------HPDPTLRTRAVAFISFYLLAWSPLFWNYGYGILVDKTEDTGGKKGQPMEYSSLGTQSVGGPRLGSGTGGAGMMVNGNGSAAAMVLEEGVDGKETHATNWTSPHQQQYSRQQVPCSEGRSYPSHALVRSALEKARRVAHSRAMKKLLNPPTLGCTLGALVGVCSPLRGLLFGDTAPFSCVFSALRTMGSAYVPCVLLILSGSLAQ----------GLEGFDSNVFRRAML--------------VMFQRFCIMPAVAFACVETGKRTGLLPTQDPLLLFVILLQGCMPSAQNSVLI 419
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A7S1TU85_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU85_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.220e-25 Identity = 84/227 (37.00%), Postives = 119/227 (52.42%), Query Frame = 2
Query: 965 DPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAAT-YDRMLRFVLLMEGCMPSAQNSAVV 1642
DPTLLP AV +SFYLLGWSP FWT + A P A AE G ++ L A SP KR++SPP++GC++G + L + P A FS + +++ +G+ YL +L+LAGS A+ S G G V A KV + A +A +I+ + MP VA ++ ++G + + +LRF+LLMEGCMPSAQNS V+
Sbjct: 154 DPTLLPAAVGYVSFYLLGWSPAFWTFASAIAATPEPKSAAKPQAVAEAEAGEKKSPLK-----AFTDWYASPWGKRMLSPPIIGCMSGLTIASVPLLSTLFLGPTAPFSPLTDAIRTIGSGYLPCVVLVLAGSFAN--SAARGGAAGEVASSWEA--KVAG--MQRARQTKALLSILCARFLIMPAVALGMMTGLTQLGLVSPTNHLLRFILLMEGCMPSAQNSVVI 369
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A836CLT3_9STRA (Auxin efflux carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT3_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.800e-25 Identity = 80/232 (34.48%), Postives = 118/232 (50.86%), Query Frame = 2
Query: 965 DPTLLPTAVACISFYLLGWSPMFWTVG-KGMLAGTPPPL---PALASGDLWAEIGLRQLTLAQT--AVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVV 1642
DPT+LP A+A ISF+L+GWSP FWTVG + + G P PALA+G G + A+ AQ SP KRI+SPP++ C+ G VG+ +P R LL + A + ++ S++ L AAY + IL+LAGSLA+ + + + + AI ++ +P+ A+LL ++ D L FVL+ME MP AQNS ++
Sbjct: 137 DPTVLPRAIAYISFFLMGWSPAFWTVGYRTLTTGIEPENEEEPALAAGSTATAAGSQXXXXXXXXQALSKAQTALASPALKRILSPPIVACLVGLTVGISSPLRWLLTDSNAPLAFLWNSIKVLAAAYTPSGILVLAGSLANAKPQN----------------------IWTKATAKKIAAISMARWLLLPIATGALLLGCVKARIVPRDPALLFVLMMEAAMPPAQNSVII 346
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE) HSP 1 Score: 114 bits (285), Expect = 9.090e-23 Identity = 113/444 (25.45%), Postives = 183/444 (41.22%), Query Frame = 2
Query: 368 PAVMLAAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRLRALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAG------------TPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRT---SPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVVSRQA 1654
P V+ A+ + +++ C +G A++GIL + +LS++++ I P LL VNVA Q + L +P FA ++ G ++ V +R L + D + R A + M Q+ P + + A+ R S P LL VA SFYL+GWSP FWT+G +L G A + +L+L++ K+++ SPT +R++SPP++ C+ G V+G+ P R LL+ A ++ + L AAY + +L+LAGSLA+ PPG S + A+ ++ +PL + +L G++ G D ML FVLL+E CMPSAQN+ ++ + A
Sbjct: 137 PVVVKASTRAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCV--SQSVASLLPIPAFAGIQVALGLAISEVA-----MRLLRINPD------------TEAGREAKVC-----MAFQNSG---------------------ILPLIFLNAMFRGS---------------------------PELLSRGVAYASFYLMGWSPTFWTIGNNILTGHLHQDGXXXXXXXXXXXXXXXXXXXVAAVPKAKLSLSKRVANLPSKVKSIAESPTVRRVLSPPIVACMMGLVIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANC-------PPGK---------------WFSRDTQKTILAVGMARWFLLPLATSGLLFGGVKYGLVPPDPMLLFVLLIESCMPSAQNTVIMLQVA 486
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: W7TA92_9STRA (Auxin efflux carrier-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA92_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.630e-22 Identity = 112/430 (26.05%), Postives = 183/430 (42.56%), Query Frame = 2
Query: 368 PAVMLAAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRLRALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLR-----TSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVV 1642
P V+ A+ +++ +C +G F RRGIL R A+ +LS ++++I+ P LL VNVA + + L LP+F +I+ S + V F L+ +D + + R + RVL+ P+ A L++ DP++LP A++ ISFYLLGW+P+FWT G +L P P S + ++ V A +++ T KRI+SPP++G + G VG+ +P L + PRA + +++ +G+AY +L+LAGSLA P + S S P ++ +C P + +I+L + G DR++ FVL ++ CMPSAQNS ++
Sbjct: 109 PVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPLR--TLLPLPLFGTMQILLCSCIAWVVTF-------LMGADVNSAKGR-------------------------------------QLRVLQTFGNGGVAPILF-------------ATVLLRN-----------HPDPSVLPLAISYISFYLLGWTPIFWTYGYSLLV--PAEAPTAQS-----------IAEKESVVTLADRIKYFIRHPPATIKRILSPPIVGSLGGLCVGV-SPLAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGAESKSIHPYLQIASVCLV------------RFCLCPALCLSIILRAMSTGWVKLDRLMVFVLFLQSCMPSAQNSVLM 442
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.250e-21 Identity = 76/228 (33.33%), Postives = 109/228 (47.81%), Query Frame = 2
Query: 962 SDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAA-TYDRMLRFVLLMEGCMPSAQNSAVV 1642
+DPTL P AVA ISFYL+ WSP+FWT+G +L G+ PA A + +L P ++ +SPP LGC+ G +VG RA+ P A +++F++L +G+AYL T +L+LAGSLA + P + T AI + MP A +L G + D +L FVLL++ CMP AQN+ V+
Sbjct: 245 TDPTLYPRAVAYISFYLVAWSPLFWTLGSTIL-GSSTSQPAYAKSP----------PSPSPSPTLPSRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALL---------------------SRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVI 440
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A6H5JBW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW8_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 4.800e-20 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 2
Query: 404 KVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLV 625
K+V+SC +GY F+++GILD++A+TSLS+LIF++ QPCLLFVNVAS L PGQK SKL VLPVFA +I+ GS V
Sbjct: 2 KLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQILFGSAV 75
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A7S2URC9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URC9_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.050e-19 Identity = 85/233 (36.48%), Postives = 113/233 (48.50%), Query Frame = 2
Query: 968 PTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAI-----LLTGIRVGAATYDR---MLRFVLLMEGCMPSAQNSAVV 1642
P LL ACISFYLL WSP+FW+ + +L GT P + T+ +T QK + FK SPPV G G VG+C P R P + S VF +L LG+AYL A+L+LAGSLA K A P G ++ K+ P + AIM+S P+++ I LL + A T R ++ FVLLMEGCMP AQN+ ++
Sbjct: 241 PALLGDVTACISFYLLAWSPLFWSFARIVL-GTIP----------------KDNTVNKTL---GQKCKGY--FKTFFSPPVAGSALGVFVGLCPPLRHAFCSPNGLLSPVFGALSTLGSAYLPAAVLVLAGSLA---GKKAPTPDGEATTTTTSNNKIS---------PASVAAIMMSRFCLAPILSFGIVKLLDLLKLLPSAAGTGARARAVVMFVLLMEGCMPPAQNTVII 439
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Match: A0A7S1ER62_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER62_9RHOD) HSP 1 Score: 98.2 bits (243), Expect = 1.300e-17 Identity = 113/436 (25.92%), Postives = 179/436 (41.06%), Query Frame = 2
Query: 356 RSERPAVMLAAGKTAFKVVSSCAMGYNFARRGILDRAALTSLSRLIFYIVQPCLLFVNVASALAMPGQKYSKLFVLPVFACQRIIAGSLVTNVCWFIQRL-------RALLLRSDFSFSMPRWH*WPSFPSRFALIVVI*TWMLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVTLVKKDRNNNVVPCATRSDPTLLPTAVACISFYLLGWSPMFWTVGKGMLAGTPPPLPALASGDLWAEIGLRQLTLAQTAVVAAQKLRTSPTFKRIISPPVLGCIAGTVVGMCAPARALLVEPRAIFSSVFESLEALGAAYLLTAILILAGSLAHPDSKVAAGPPGSVGGGGSAFPKVER*PLCSAFVPEATRAIMVSHIAFMPLVAAAILLTGIRVGAATYDRMLRFVLLMEGCMPSAQNSAVV 1642
RS+ A+ L A +++ + +G RRG+LD L+SLS+ ++ I P +LFVNV + L Q + LP+ A +I+ G+L+ V + R+ R L + F S + P FA NN+ +DPT L +A ISF+L+GWSP+FW++G +L+ + + + G R+ A L SP + RI +PP++G +AG V G R L+ A +V ++L+ LG+AY A+L+LAGSLA P ++ +V ++ ++ + I + FMP+ A L T +G D M +F +LME MPSAQNS ++
Sbjct: 141 RSDVVAISLLA---TLRLMMTIGIGALAQRRGVLDSTVLSSLSKAVYNIFLPSILFVNVGTTLC--TQSLLSVAPLPLLALAQILFGALLGKVLCRVLRVEESSSDGRILNVSCMFGNSA-------ALPLLFA------------------------------------------------------------------NNLF----AADPTRLAPLIAGISFFLIGWSPLFWSLGYYILSAPRVTV------EKKTKQGKRERMRA---------LMKSPIWARIFAPPIIGALAGLVFGSVPFLRNLVFAKDAPLGAVVDALKTLGSAYTPCAVLVLAGSLATPQKSASSSSSAAV-----SWSRIMQ-----------IAGICIVRFIFMPIFALGTLRTTALLGILL-DPMQKFTILMESIMPSAQNSVLI 462 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig141.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig141.1.1 >prot_P-wetherbeei_contig141.1.1 ID=prot_P-wetherbeei_contig141.1.1|Name=mRNA_P-wetherbeei_contig141.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp MLLQHCARRVWARAWRLRQRVLRAASYEYAPPLQIRALSRSSSPTASSAVback to top mRNA from alignment at P-wetherbeei_contig141:652..4075- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig141.1.1 ID=mRNA_P-wetherbeei_contig141.1.1|Name=mRNA_P-wetherbeei_contig141.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3424bp|location=Sequence derived from alignment at P-wetherbeei_contig141:652..4075- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig141:652..4075- >mRNA_P-wetherbeei_contig141.1.1 ID=mRNA_P-wetherbeei_contig141.1.1|Name=mRNA_P-wetherbeei_contig141.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig141:652..4075- (Phaeothamnion wetherbeei SAG_119_79)back to top |