mRNA_P-wetherbeei_contig14094.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14094.2.1
Unique NamemRNA_P-wetherbeei_contig14094.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: A0A521M8E1_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M8E1_9HYPH)

HSP 1 Score: 311 bits (797), Expect = 6.500e-101
Identity = 162/193 (83.94%), Postives = 175/193 (90.67%), Query Frame = 1
Query:    1 MRAKLDGLIAVGSFGVACAVGLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILAKRARQETRMAPELAGLAVLMLTGSFVHFYLMYECLAIL 579
            MR  +D LIAVG FG+ACAVGLVGAFVGLKVSSFWIDELFTAWIVE+GIGFDEF+ARIVTDVHPPVYY+LAF HAQLFGDDEVGLRSLSA  AVAA+LLFIVA K+YFSLAARLFG AMATGSFFWFYQAQNARGYSL+F+IGVAML +SLSILAKR+R +  M  EL GLA LML GSFVHFYLMYECLA+L
Sbjct:    1 MRDSVDRLIAVGCFGIACAVGLVGAFVGLKVSSFWIDELFTAWIVEIGIGFDEFVARIVTDVHPPVYYMLAFLHAQLFGDDEVGLRSLSASCAVAAVLLFIVATKSYFSLAARLFGGAMATGSFFWFYQAQNARGYSLSFLIGVAMLTVSLSILAKRSRHDVGMVRELTGLAALMLIGSFVHFYLMYECLAVL 193          
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: A0A1F3A3A7_9PROT (PMT_2 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3A3A7_9PROT)

HSP 1 Score: 281 bits (718), Expect = 4.550e-89
Identity = 149/193 (77.20%), Postives = 161/193 (83.42%), Query Frame = 1
Query:    1 MRAKLDGLIAVGSFGVACAVGLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILAKRARQETRMAPELAGLAVLMLTGSFVHFYLMYECLAIL 579
            MR  LD LIAVG FGVACA+G  GAFVGL+VSSFW+DELFTAWIVEVGI FDEFIAR+VTDVHPPVYY LAF HA LFGD EVGLRSLSA+  VAAILLF+VA K+YFSLAARLFG AMATGSFFWFY AQNARGYSLAF+IGV +LAISLSIL+KR+R              LML GSFVHFYLMYECLA+L
Sbjct:    1 MRPSLDSLIAVGCFGVACAIGSAGAFVGLRVSSFWLDELFTAWIVEVGIDFDEFIARVVTDVHPPVYYGLAFLHAHLFGDGEVGLRSLSAVCGVAAILLFVVATKSYFSLAARLFGGAMATGSFFWFYHAQNARGYSLAFLIGVGILAISLSILSKRSRXXXXXXXXXXXXXALMLIGSFVHFYLMYECLAVL 193          
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: A0A522ZB25_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A522ZB25_9HYPH)

HSP 1 Score: 145 bits (365), Expect = 2.120e-37
Identity = 88/195 (45.13%), Postives = 118/195 (60.51%), Query Frame = 1
Query:    1 MRAKLDGLIAVGSFGVACAVGLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILA--KRARQETRMAPELAGLAVLMLTGSFVHFYLMYECLAIL 579
            M   +D   A+  F VAC VGL+GAFVGL   S WIDEL TA IVE G       +RI +D++ P+Y +    ++++ G  +  LRS SA+ A AAILLF    +  FSL ARLFGAAMATGSF+W  Q+QNAR Y+LA +IG  +L +SL++LA  K    +   +  +  L  L +   F HFYL+   L+ L
Sbjct:   14 MARTIDSRFAIAGFSVACVVGLIGAFVGLDYKSMWIDELLTAGIVEPGGRPGTLFSRIASDLNSPLYSVTLALYSKVVGTSDSALRSFSALAACAAILLFAFGTRRSFSLPARLFGAAMATGSFYWVVQSQNARNYALALLIGSGILVVSLALLAGDKDGDDDRLQSRRVFVLLTLCVVACFTHFYLVIAALSAL 208          
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: UPI001F5D9504 (glycosyltransferase family 39 protein n=1 Tax=Phenylobacterium aquaticum TaxID=1763816 RepID=UPI001F5D9504)

HSP 1 Score: 127 bits (318), Expect = 7.790e-31
Identity = 73/170 (42.94%), Postives = 102/170 (60.00%), Query Frame = 1
Query:   55 AVGLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILAKRARQETRMAPELAGLAVLMLTGSFVHFYLMYE 564
            AV L  AF GL  SS+WIDELFT ++V+   G+ E +AR +TD HPP YYL   +   LFG  EV +R  SA+ AVAA+++F+   +  +SL ARLFGA +A  S +WF Q+QNAR Y+   +    +   + +I  + A      A  +AGLA   L GS  HFY++ +
Sbjct:   17 AVHLAWAFHGLATSSYWIDELFTLFVVDHPGGWGEVLARALTDTHPPAYYLALNSWIGLFGSSEVAVRGFSALCAVAAVVVFVGGTRGVYSLRARLFGALVAASSLWWFTQSQNARNYAFCMLASAVLAVAACAIRRREADAGPFPARAVAGLACAGLIGSMGHFYMLLQ 186          
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: UPI001F5C8C6E (hypothetical protein n=1 Tax=Phenylobacterium aquaticum TaxID=1763816 RepID=UPI001F5C8C6E)

HSP 1 Score: 119 bits (299), Expect = 3.930e-28
Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 1
Query:   55 AVGLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILAKRARQETRMAPELAGLAVLMLTGSFVHFYLMYE 564
            AV L  AF GL  SS+WIDELFT ++V+   G+ E +AR +TD HPP YYL   +   LFG  EV +RSLSAI A  A+ +F+   +  +SL ARLF   +A G+ +WF Q+QN R Y+   +    + A +++I  ++A+     A   A L    L GS  HFY++ +
Sbjct:   17 AVFLGWAFHGLSTSSYWIDELFTLFVVDHHGGWSEVMARALTDTHPPAYYLALNSWIGLFGSSEVAVRSLSAICATGAVAVFMAGTRGVYSLRARLFAGLVAVGTAWWFNQSQNGRNYAFCMLASAVLAAAAVAIRRRQAQGGPFPARAYATLVAAGLIGSMGHFYMLLQ 186          
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: UPI001BA9EDD1 (glycosyltransferase family 39 protein n=1 Tax=Caulobacter sp. S6 TaxID=2823693 RepID=UPI001BA9EDD1)

HSP 1 Score: 119 bits (298), Expect = 6.510e-28
Identity = 73/166 (43.98%), Postives = 106/166 (63.86%), Query Frame = 1
Query:   61 GLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILAKRARQETRMA-PELAGLAVLMLTGSFVHFYL 555
            GLV AFVGL  SS+++DELFT ++++   G +E + R +TD  PP YYLL +  ++L G  E  +R  SA+ AVAAIL+F + L+  FS  ARLF A +A    FWF Q+Q+ARGY+L  +I   +L +++ +  +R  Q+ +   P  AGL +L + G  VHFYL
Sbjct:   36 GLVFAFVGLAASSYFVDELFTLYLIDHHGGPEEVVRRALTDTGPPGYYLLLYGWSKLAGLSEAAMRLPSAVCAVAAILVFGLGLEGAFSTRARLFAATVAVIERFWFVQSQSARGYALGLLISAGLLVLAVRL--RRGVQDGKPVWPYWAGLTMLGVAGCMVHFYL 199          
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: UPI001AFD18E3 (DUF2723 domain-containing protein n=1 Tax=Dokdonella sp. TaxID=2291710 RepID=UPI001AFD18E3)

HSP 1 Score: 113 bits (282), Expect = 1.140e-25
Identity = 72/175 (41.14%), Postives = 100/175 (57.14%), Query Frame = 1
Query:   40 FGVACAVGLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILAKRARQETRMAPELAGLA--VLMLTGSFVHFYLM 558
            +G     GL+ AFVGL  SS+W+DELFT ++V+  +   E + RI+ DVHPP+YYL+    + +FG  E   RSLSAI  V A+L+F    +      A  F  A+AT S FWF QAQNAR Y+   ++   +LA +L +  +R  +E+   P  A L   VL L  S  H YL+
Sbjct:   21 YGSIALAGLLLAFVGLSASSYWVDELFTLYVVDPQVDVAEMMQRILRDVHPPLYYLVLDGWSAVFGQSEAATRSLSAICGVLAVLVFAWGARHVARPLAIAFACAVATTSVFWFEQAQNARSYAFLMLLTAGLLAAALHL--RRRTRESSAFPFAAWLTLTVLGLAASQTHSYLL 193          
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: UPI001B146B43 (Uncharacterized protein n=1 Tax=Dokdonella sp. TaxID=2291710 RepID=UPI001B146B43)

HSP 1 Score: 112 bits (279), Expect = 2.710e-25
Identity = 68/166 (40.96%), Postives = 96/166 (57.83%), Query Frame = 1
Query:   61 GLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILAKRARQETRMAPELAGLAVLMLTGSFVHFYLM 558
            G + AFVGL  SS+WIDELFT ++V+      + + RI+ DVHPP+YY+L      +FG  E  +RS SAI AVAA+L+F   ++   S  A  F  A+AT S FWF QAQNAR Y    ++G ++LA +L +     R+        + L++L L     H YL+
Sbjct:    6 GAILAFVGLSASSYWIDELFTLYVVDPHASRAQMMWRILRDVHPPLYYILLNGWGAVFGQSEAAIRSFSAICAVAALLVFAWGVRRIVSPVAIAFACAVATTSTFWFEQAQNARSYGWVMLLGASVLAAALHLRRSVRREAGFPLGAWSILSLLGLAAGLTHSYLL 171          
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: UPI0019576853 (glycosyltransferase family 39 protein n=1 Tax=Dyella mobilis TaxID=1849582 RepID=UPI0019576853)

HSP 1 Score: 110 bits (274), Expect = 1.420e-24
Identity = 72/167 (43.11%), Postives = 99/167 (59.28%), Query Frame = 1
Query:   61 GLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILAKRARQETRMA-PELAGLAVLMLTGSFVHFYLM 558
            G V AF+GL  +SFW DELFT  +++   G      R+++DVHPP+Y  L +   QL G  EV +R  SA+LAVAAI LF+   +   + AA  F  A AT S +WF QAQNAR Y+L  V+ VA+LA ++  L +R+R          AGL +L + GS  H Y++
Sbjct:   30 GCVFAFIGLSNNSFWADELFTLQLIDHHDGLAGVFRRMLSDVHPPLYDFLLYGWVQLAGTGEVAVRLPSALLAVAAIGLFVACTRRRLTPAAIAFACAAATTSMYWFVQAQNARDYALCEVLSVALLATAIG-LRRRSRSSAGFPWGYWAGLTLLGVAGSQTHAYML 195          
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Match: A0A4Q8LX09_9GAMM (Uncharacterized protein n=11 Tax=Pseudoxanthomonas TaxID=83618 RepID=A0A4Q8LX09_9GAMM)

HSP 1 Score: 105 bits (262), Expect = 6.230e-23
Identity = 71/171 (41.52%), Postives = 95/171 (55.56%), Query Frame = 1
Query:   46 VACAVGLVGAFVGLKVSSFWIDELFTAWIVEVGIGFDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLFIVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAISLSILAKRARQETRMAPELAGLAVLMLTGSFVHFYLM 558
            VACA     AFVGL  S++W DELFT +++  G G      R +TDVHPP+YY+L +  ++L G  EV LR  SA+ AV A+ L    L   FS AA  F  A+   S FWF Q+QNAR Y  A +I  A++ ++L +  +            A L  L L GS +HFYL+
Sbjct:   34 VACAF----AFVGLARSNYWADELFTVYVIGGGDGLAGVWRRALTDVHPPLYYVLLYGWSRLGGLSEVWLRLSSALCAVLALALTARVLWRRFSPAALGFALALVAVSTFWFEQSQNARSYGAAILIAAALMGLTLRLRERTPATGAFPWGAFAALFALGLAGSLMHFYLL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14094.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521M8E1_9HYPH6.500e-10183.94Uncharacterized protein n=1 Tax=Reyranella sp. Tax... [more]
A0A1F3A3A7_9PROT4.550e-8977.20PMT_2 domain-containing protein n=1 Tax=Alphaprote... [more]
A0A522ZB25_9HYPH2.120e-3745.13Uncharacterized protein n=1 Tax=Reyranella sp. Tax... [more]
UPI001F5D95047.790e-3142.94glycosyltransferase family 39 protein n=1 Tax=Phen... [more]
UPI001F5C8C6E3.930e-2841.18hypothetical protein n=1 Tax=Phenylobacterium aqua... [more]
UPI001BA9EDD16.510e-2843.98glycosyltransferase family 39 protein n=1 Tax=Caul... [more]
UPI001AFD18E31.140e-2541.14DUF2723 domain-containing protein n=1 Tax=Dokdonel... [more]
UPI001B146B432.710e-2540.96Uncharacterized protein n=1 Tax=Dokdonella sp. Tax... [more]
UPI00195768531.420e-2443.11glycosyltransferase family 39 protein n=1 Tax=Dyel... [more]
A0A4Q8LX09_9GAMM6.230e-2341.52Uncharacterized protein n=11 Tax=Pseudoxanthomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14094contigP-wetherbeei_contig14094:1161..1739 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1123237.Salmuc_00403
PFAMsPMT_2
Model size579
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue9.93e-12
EggNOG OGsCOG5305@1|root,COG5305@2|Bacteria,1P6C0@1224|Proteobacteria
DescriptionDolichyl-phosphate-mannose-protein mannosyltransferase
Cds size579
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186008.6010547-CDS-P-wetherbeei_contig14094:1160..17391683186008.6010547-CDS-P-wetherbeei_contig14094:1160..1739Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14094 1161..1739 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14094.2.1prot_P-wetherbeei_contig14094.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14094 1161..1739 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14094.2.1

>prot_P-wetherbeei_contig14094.2.1 ID=prot_P-wetherbeei_contig14094.2.1|Name=mRNA_P-wetherbeei_contig14094.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp
MRAKLDGLIAVGSFGVACAVGLVGAFVGLKVSSFWIDELFTAWIVEVGIG
FDEFIARIVTDVHPPVYYLLAFAHAQLFGDDEVGLRSLSAILAVAAILLF
IVALKAYFSLAARLFGAAMATGSFFWFYQAQNARGYSLAFVIGVAMLAIS
LSILAKRARQETRMAPELAGLAVLMLTGSFVHFYLMYECLAIL
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mRNA from alignment at P-wetherbeei_contig14094:1161..1739+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14094.2.1 ID=mRNA_P-wetherbeei_contig14094.2.1|Name=mRNA_P-wetherbeei_contig14094.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig14094:1161..1739+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGGCCAAACTCGATGGTTTGATTGCCGTAGGCAGCTTCGGCGTCGC CTGCGCTGTCGGGTTGGTCGGCGCGTTCGTCGGCCTCAAGGTCAGCAGCT TCTGGATAGATGAGCTTTTCACCGCGTGGATCGTCGAAGTCGGCATCGGC TTCGACGAATTCATCGCTCGCATCGTGACCGACGTTCACCCGCCGGTTTA CTACCTGCTGGCATTCGCCCATGCCCAGCTGTTTGGGGACGATGAAGTCG GCCTGCGCAGTCTCAGCGCCATATTGGCCGTCGCCGCCATTCTGTTGTTC ATTGTCGCCCTCAAGGCCTACTTCAGCCTGGCGGCCCGGCTGTTCGGTGC CGCGATGGCGACGGGCTCGTTCTTTTGGTTCTATCAGGCGCAGAACGCGC GCGGCTATTCTCTGGCGTTCGTCATCGGCGTTGCGATGCTTGCCATCAGC CTGTCCATCCTGGCCAAGCGGGCGCGGCAGGAGACGCGGATGGCGCCGGA GCTGGCCGGGCTCGCCGTGCTGATGCTGACCGGGTCGTTTGTCCATTTCT ATCTCATGTACGAATGCCTCGCGATCCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14094:1161..1739+

>mRNA_P-wetherbeei_contig14094.2.1 ID=mRNA_P-wetherbeei_contig14094.2.1|Name=mRNA_P-wetherbeei_contig14094.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig14094:1161..1739+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGGCCAAACTCGATGGTTTGATTGCCGTAGGCAGCTTCGGCGTCGC
CTGCGCTGTCGGGTTGGTCGGCGCGTTCGTCGGCCTCAAGGTCAGCAGCT
TCTGGATAGATGAGCTTTTCACCGCGTGGATCGTCGAAGTCGGCATCGGC
TTCGACGAATTCATCGCTCGCATCGTGACCGACGTTCACCCGCCGGTTTA
CTACCTGCTGGCATTCGCCCATGCCCAGCTGTTTGGGGACGATGAAGTCG
GCCTGCGCAGTCTCAGCGCCATATTGGCCGTCGCCGCCATTCTGTTGTTC
ATTGTCGCCCTCAAGGCCTACTTCAGCCTGGCGGCCCGGCTGTTCGGTGC
CGCGATGGCGACGGGCTCGTTCTTTTGGTTCTATCAGGCGCAGAACGCGC
GCGGCTATTCTCTGGCGTTCGTCATCGGCGTTGCGATGCTTGCCATCAGC
CTGTCCATCCTGGCCAAGCGGGCGCGGCAGGAGACGCGGATGGCGCCGGA
GCTGGCCGGGCTCGCCGTGCTGATGCTGACCGGGTCGTTTGTCCATTTCT
ATCTCATGTACGAATGCCTCGCGATCCTG
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