mRNA_P-wetherbeei_contig14094.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: A0A521M8E2_9HYPH (Protein TonB n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M8E2_9HYPH) HSP 1 Score: 192 bits (489), Expect = 4.040e-58 Identity = 141/227 (62.11%), Postives = 158/227 (69.60%), Query Frame = 1
Query: 52 VSLGLHGLAVVAALMAFGPMQLATDDAAAITIYVEPDAAPVATPXXXXXXXXXTVAMPDYAPS---PPEELPLPDFSVPLPPPKQAQSA-----PPRPVXXXXXXXXXXXXXXXXXXXERASPAPAASXXXXXXXXXXXXGWNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQGSTLPAPGIEATRTVRIRFRLGD 708
+S LHG+AV AALMAFG +LA DD+AAIT+Y+EP AAPVAT XX A + PP+E LPDF+ P PP+P XXXXXXXXXXXXXXXXX S ++ GWNALLAAWLAANRRYP++ARRRSEEGEV+VRFTV DGRV+EAAVV GSGFAALDAAALRLLQG+TLPAPGIEATRTVRIRFRLGD
Sbjct: 1 MSFSLHGVAVAAALMAFGSQRLALDDSAAITVYIEPHAAPVATASESRPAVXXXXXXXXXATAALDPPKEPALPDFAPPXXXXXXXXXXXXXXXPPKPAQXXXXXXXXXXXXXXXXXTVLQSAPAQSAPVSANAPATVVPGWNALLAAWLAANRRYPDEARRRSEEGEVSVRFTVTSDGRVSEAAVVKGSGFAALDAAALRLLQGATLPAPGIEATRTVRIRFRLGD 227
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: A0A1F3A3B0_9PROT (TonB_C domain-containing protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3A3B0_9PROT) HSP 1 Score: 194 bits (493), Expect = 4.420e-58 Identity = 162/278 (58.27%), Postives = 175/278 (62.95%), Query Frame = 1
Query: 1 LQYNITDGQSDRPIAIAV------------SLGLHGLAVVAALMAFGPMQLATDDAAAITIYVEPDAAPVAT---------PXXXXXXXXXTVAMPDYAPSPPEELPLPDFSVP------------LPPPKQAQSAPP---------RPVXXXXXXXXXXXXXXXXXXXERASPAPAASXXXXXXXXXXXXGWNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQGSTLPAPGIEATRTVRIRFRLGD 708
L+YNITD Q RPI IA+ SLGLH + V AALMAFG +L DDA AIT++VEPD APVAT PXXXXXXXXX A PP+E LPDF+ P PK A A R X XXXXXXXXXXXXXX + APAA GWNALLAAWLAANRRYP++ARRRSEEGEVTVRFTVAHDGRVA+ AVV GSGF ALD AALRLLQG+TLPAPGIEATRTVRIRFRL D
Sbjct: 2 LRYNITDNQLGRPIGIALASGWSLGAAITASLGLHAIVVAAALMAFGSQRLGIDDAVAITVFVEPDRAPVATASEIPPPAAPXXXXXXXXXXXPPAVVALEPPKEPALPDFTPPPXXXXXXXXXXXXXXPKPALXAXXXXXXXXXXKRAAXTVXXXXXXXXXXXXXXELASQARAPAA---VATVPATVAPGWNALLAAWLAANRRYPDEARRRSEEGEVTVRFTVAHDGRVAQVAVVKGSGFTALDDAALRLLQGATLPAPGIEATRTVRIRFRLRD 276
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: A0A1Q3V7H4_9PROT (TonB_C domain-containing protein n=1 Tax=Rhodospirillales bacterium 69-11 TaxID=1895825 RepID=A0A1Q3V7H4_9PROT) HSP 1 Score: 80.1 bits (196), Expect = 6.710e-14 Identity = 46/90 (51.11%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 448 GWNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQGSTLPA-----PGIEATRTVRIRFRL 702
GW LAAWLAA+R YPEDARR E+G VRFT+ HDGRV A+V SG LD AA +L+G ++P P T TV IR+ L
Sbjct: 266 GWRGELAAWLAAHRIYPEDARRAGEQGRAVVRFTIDHDGRVLAVALVGSSGADRLDDAAQAMLRGKSVPPLPAAMPQDRLTVTVTIRYAL 355
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: A0A1M3PJG0_9PROT (TonB_C domain-containing protein n=1 Tax=Rhodospirillales bacterium 70-18 TaxID=1895826 RepID=A0A1M3PJG0_9PROT) HSP 1 Score: 73.2 bits (178), Expect = 4.950e-12 Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 451 WNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQGSTLPAPGI-----EATRTVRIRFRL 702
W LAAW A++ YPE ARR +G T+RF + GRVAE +++GSG LDAAAL LL+G+TLP P E TV +R+RL
Sbjct: 135 WRQQLAAWFDAHQTYPEAARRHGVQGVATLRFLLTPRGRVAEVTLLSGSGSDMLDAAALGLLRGATLPPPPAGTPEGERRITVPLRYRL 223
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: A0A440ICH2_9HYPH (Protein TonB (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A440ICH2_9HYPH) HSP 1 Score: 62.8 bits (151), Expect = 9.550e-9 Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 451 WNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQGSTLPAPGIE 669
W + L WL + RYP AR R +G V FTVA G+V + SG A LD AAL+ LQG+T+PAP +E
Sbjct: 84 WKSRLYTWLGRHTRYPSAARLRRAKGTANVVFTVAASGQVTSVRLARSSGDADLDRAALKTLQGATVPAPPVE 156
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: A0A530BE78_9HYPH (Energy transducer TonB (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A530BE78_9HYPH) HSP 1 Score: 62.0 bits (149), Expect = 1.240e-8 Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 1
Query: 451 WNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQGSTLPAPGIEATRT 681
W + L WL + RYP AR R +G V FTVA G+V + SG A LD AAL+ LQG+T+PAP E T
Sbjct: 50 WKSRLYTWLGRHTRYPSAARLRRAKGTANVVFTVAASGQVTSVRLARSSGDADLDRAALKTLQGATVPAPPAEKAGT 126
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: A0A439LNE2_9HYPH (TonB family protein n=5 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A439LNE2_9HYPH) HSP 1 Score: 62.0 bits (149), Expect = 1.130e-7 Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 1
Query: 451 WNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQGSTLPAPGIEATRT 681
W + L WL + RYP AR R +G V FTVA G+V + SG A LD AAL+ LQG+T+PAP E T
Sbjct: 232 WKSRLYTWLGRHTRYPSAARLRRAKGTANVVFTVAASGQVTSVRLARSSGDADLDRAALKTLQGATVPAPPAEKAGT 308
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: UPI0014214022 (energy transducer TonB n=1 Tax=Parvibaculum indicum TaxID=562969 RepID=UPI0014214022) HSP 1 Score: 60.5 bits (145), Expect = 2.870e-7 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 451 WNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQ-GSTLPAP--GIEATRTVRIRFRL 702
W A L A LA +RYP DAR E G V +R + DG V+ A+V SG+AALD AA+ L++ S +P P G+E V +R+ L
Sbjct: 181 WQARLGAHLARYKRYPSDARANDETGIVYMRMFIERDGAVSAASVYRSSGYAALDRAAMVLVEEASPVPPPPEGMEGDIVVPLRYNL 267
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: UPI0018DF7BC9 (energy transducer TonB n=1 Tax=Sphingomonas sp. MA1305 TaxID=2479204 RepID=UPI0018DF7BC9) HSP 1 Score: 60.1 bits (144), Expect = 3.020e-7 Identity = 41/90 (45.56%), Postives = 50/90 (55.56%), Query Frame = 1
Query: 451 WNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQGSTLPAPGIEATR------TVRIRFRL 702
W A + A L RRYPE ARR ++GEV +RF + DG V AA+V GSG AALD AA L + P P I R TV I+F +
Sbjct: 149 WEAQIMARLQRVRRYPEAARRAGQQGEVVLRFRLTRDGHVHAAAIVRGSGCAALDRAAEETLARAD-PLPPIPPDRPDAITLTVAIQFAV 237
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Match: A0A514WPX6_9SPHN (TonB_C domain-containing protein n=4 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A514WPX6_9SPHN) HSP 1 Score: 58.5 bits (140), Expect = 9.400e-7 Identity = 65/218 (29.82%), Postives = 89/218 (40.83%), Query Frame = 1
Query: 19 DGQSDRPIAIAVSLGLHGLAVVAALMAFGPMQLATDDAAAITIYVEPDAAPVATPXXXXXXXXXTVAMPDYAPSPPEELPLPDFSVPLPPPKQAQSAPPRPVXXXXXXXXXXXXXXXXXXXERASPAPAASXXXXXXXXXXXXGWNALLAAWLAANRRYPEDARRRSEEGEVTVRFTVAHDGRVAEAAVVTGSGFAALDAAALRLLQGSTLPAPGIEA 672
+G S R +A+AV+ G+H AV A +AFG +Q D A V D V P A P P P ++PLP A PP PAPAA+ + L A L RRYP A R+ +G ++ F + +GR+ AA+V+G+G AALD AAL ++ + P P I A
Sbjct: 19 NGASVRAMALAVTAGVHVAAVAVAALAFGWLQAGGADHPAPPTLVTFD---VHAPDPARRQPRVPAARPRQVPGTPPAA----MALPLPAHTAAPIRPPA----------------------GEQPAPAANGGMADGLPDLALSYRRALMARLEGQRRYPAAALRQQAQGTGSLLFRIDREGRLLGAAIVSGTGHAALDQAALDIVSRAA-PFPPIPA 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14094.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14094.1.1 >prot_P-wetherbeei_contig14094.1.1 ID=prot_P-wetherbeei_contig14094.1.1|Name=mRNA_P-wetherbeei_contig14094.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp LQYNITDGQSDRPIAIAVSLGLHGLAVVAALMAFGPMQLATDDAAAITIYback to top mRNA from alignment at P-wetherbeei_contig14094:315..1025+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14094.1.1 ID=mRNA_P-wetherbeei_contig14094.1.1|Name=mRNA_P-wetherbeei_contig14094.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig14094:315..1025+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14094:315..1025+ >mRNA_P-wetherbeei_contig14094.1.1 ID=mRNA_P-wetherbeei_contig14094.1.1|Name=mRNA_P-wetherbeei_contig14094.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig14094:315..1025+ (Phaeothamnion wetherbeei SAG_119_79)back to top |