mRNA_P-wetherbeei_contig1409.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: A0A6H5L6M0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M0_9PHAE) HSP 1 Score: 321 bits (823), Expect = 5.770e-104 Identity = 186/255 (72.94%), Postives = 215/255 (84.31%), Query Frame = 2
Query: 317 AVAAVAG-VALHLLPHPLVASAATELPVTLPGALADASLADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQLPDDSS-GIDNEKEEAEEEVKKVGTEKKASAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
A+ A+AG V+ LLPH VA ATE V + A D +L +RLT SGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRL++FAG+VGALAVMTVLAVL+G+AFH+VP+ TS +P DD +A AAFL+FG+NTLKDAY LPDDS+ GI+ E+ EAEE VK++ E K + WALILQTFSLVFAAEFGDRSFLTTIALGAAQNP V GA+ AHASATGIAV GGALLSQYISEKV+GYIGG+LF+VFA+TTA+GIF
Sbjct: 94 ALLALAGAVSCQLLPHAAVA--ATETAVPIASAAVDGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPLDDIIAAAAFLYFGINTLKDAYALPDDSNQGIEEERAEAEESVKEL--EGKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGALFVVFAVTTAIGIF 344
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: A0A836CPU7_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPU7_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.040e-84 Identity = 174/284 (61.27%), Postives = 204/284 (71.83%), Query Frame = 2
Query: 257 GAGRVPARLPRAIVSICKWGAVAAVAGVALHLLPHPLVASAATELPVTLPGALADASLADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQLPDDSSGIDNEKEEAEEEVKKVGTEKKA-----------SAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
G+ R A L R + + + V VA VAL P A+AA L GA+AD +L + T +GF QAFSLVFVSEIGDKTFFIA LLAAKTSRL++FAG++ AL+VMTVL+ LIGVAFH+VP+ LT+ IPFDDY+AVAAFL+FGL TL+DA Q+PDD DN EAE S ALI QTF LVFAAEFGDRSFLTTIAL AAQNP+SV GA+AAHASATGIAV GGALLSQYISEK+VGYIGG+LFI+FA+TTA+G+F
Sbjct: 79 GSARSAAALSRRVGA--QLSGVFLVAAVALLSHALPAAAAAAVTAGAPLTGAIADGTLTEA-TSNGFVQAFSLVFVSEIGDKTFFIAGLLAAKTSRLISFAGSIAALSVMTVLSCLIGVAFHSVPSTLTNGIPFDDYIAVAAFLYFGLVTLRDASQIPDD----DNSGMEAEAAXXXXXXXXXXXXXXXXXXGAPSTLALIAQTFGLVFAAEFGDRSFLTTIALSAAQNPISVAGGAIAAHASATGIAVMGGALLSQYISEKLVGYIGGTLFIIFAITTALGLF 355
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: W7TMF8_9STRA (GDT1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF8_9STRA) HSP 1 Score: 262 bits (669), Expect = 2.460e-80 Identity = 152/256 (59.38%), Postives = 194/256 (75.78%), Query Frame = 2
Query: 314 GAVAAVAGVALHL-LPHPLVASAATELPVTLPGALADASLADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQLPD-DSSGIDNEKEEAEEEVKKVGTEKKASAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
G A+ G+ L +P A++A+ +T +L+ ++ +L SGF QAFSLVFVSEIGDKTFFIA LLA KTSRL++F G++ AL+VMT+++VLIG AFHA+P L FD +VAVAAF +FGL TLKD+Y + D DSSG+D E+ EAE+ V++ ++ + W ILQ FSLVFAAEFGDRSFL+TIALGAAQNP SV GA+ AHA+ATGIAVA GA LS+Y SEK++GYIGG+LFI+FALTTA+GIF
Sbjct: 125 GLAVALTGIVLIAGMPIGAHAASASLADLTAGASLSYNNVVAKLAASGFLQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFTGSMAALSVMTIISVLIGQAFHAIPQGLGGGFKFDQWVAVAAFSYFGLKTLKDSYDMADGDSSGVDEERAEAEKAVQESSAPERRTPWGTILQIFSLVFAAEFGDRSFLSTIALGAAQNPFSVATGAIGAHATATGIAVASGAFLSKYFSEKLIGYIGGTLFIIFALTTALGIF 380
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: A0A7S2K988_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K988_9STRA) HSP 1 Score: 261 bits (666), Expect = 1.360e-79 Identity = 151/223 (67.71%), Postives = 180/223 (80.72%), Query Frame = 2
Query: 413 LADAS-LADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQL-PDDSSGIDNEKEEAEEEVKKVGTEKKASAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
+ADAS + R + SGF+QAFSLVF+SEIGDKTFFIA LLA KTSRLV+F G++GALA MTVL+VLIG FHAVPA + IP DD AV AF FFGL TLK+A + P+ S +D E EEA+E V+ T K+ +AW I+ TF+LVFAAEFGDRSFL+TIAL AAQNP SVGFGA+AAH ATGIAVAGG+ +++YISEKV+GYIGGSLF+VFALTTA+GIF
Sbjct: 181 VADASAMVGRFSESGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRLVSFIGSMGALAAMTVLSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFTFFGLKTLKEASDMDPEAGSVMDEEFEEAQEAVEGSQTIKEITAWGQIVSTFALVFAAEFGDRSFLSTIALSAAQNPFSVGFGAVAAHGIATGIAVAGGSYVAKYISEKVIGYIGGSLFLVFALTTALGIF 403
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: A0A7S1CXU9_CYCTE (GDT1 family protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXU9_CYCTE) HSP 1 Score: 256 bits (655), Expect = 6.910e-79 Identity = 144/218 (66.06%), Postives = 175/218 (80.28%), Query Frame = 2
Query: 422 ASLADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQLPDDSSGIDNEKEEAEEEVKKVGTEKKASAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
ASL D LT +GF+QAFSLVF+SEIGDKTFFIA LLA KTSR+V++ G++GALAVMT+L+VLIG FHAVPA + IP DD AV AF FFGL TLK+A ++ D S +D E EAEE V+ T K+++AWA I+ TF LVFAAEFGDRSFL+TIAL AAQNPLSV GA+AAH ATGIAV+GG+ +++Y+SEKV+G IGG+LF+VFA TTA GIF
Sbjct: 114 ASLFDSLTETGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRVVSYLGSMGALAVMTILSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFAFFGLKTLKEAIEMDSDGSTMDEEFAEAEETVEGSNTVKQSTAWAQIVSTFVLVFAAEFGDRSFLSTIALSAAQNPLSVAGGAVAAHGLATGIAVSGGSYVAKYVSEKVIGLIGGTLFLVFAATTAFGIF 331
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: A0A7S2U7L4_9STRA (GDT1 family protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7L4_9STRA) HSP 1 Score: 256 bits (655), Expect = 2.330e-78 Identity = 152/253 (60.08%), Postives = 192/253 (75.89%), Query Frame = 2
Query: 323 AAVAGVALHLLPHPLVASAATELPVTLPGALADA-SLADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQLPDDS-SGIDNEKEEAEEEVKKVGTEKKASAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
A VA A L+ P V++A L + G A A + D L+++GF+QAFSLVFVSEIGDKTFFIA LLA KTSRL++F G++GALAVMT+++VLIG FHAVP+ L+ +P DD AVAAF FFG+ TLK+A ++ ++ S +D E +AEE V+ + K+ +AW I F LVFAAEFGDRSFL TIALGAAQNP+SV GA+AAHA ATGIAVAGGA L++Y+SEKV+GYIGG+LF+VFA TTA+GIF
Sbjct: 119 ATVATGAAMLVLSPAVSNAVAGLGEIVGGTSASAVTWLDSLSQTGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFIGSIGALAVMTIISVLIGQIFHAVPSGLSQGLPLDDIAAVAAFAFFGIKTLKEAIEMDEEGVSAMDEEFADAEEAVEGSDSIKQITAWGKIASIFGLVFAAEFGDRSFLATIALGAAQNPVSVAGGAIAAHAMATGIAVAGGAYLAKYVSEKVIGYIGGTLFLVFAFTTALGIF 371
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: A0A7S2HML6_9STRA (GDT1 family protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HML6_9STRA) HSP 1 Score: 246 bits (629), Expect = 1.210e-74 Identity = 136/217 (62.67%), Postives = 171/217 (78.80%), Query Frame = 2
Query: 425 SLADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQLPDDSSGIDNEKEEAEEEVKKVGTEKKASAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
S +++ +GF+QAFSLVFVSEIGDKTFFIA LLA KTSR V+ G+VGALAVMT+++VLIG FHAVP+ + IP DD AV AF FFG TLK+++ + + S +D E EAEE V++ T ++ +AWA I TF LVFAAEFGDRSFL+TIAL AAQNP+SV GA+AAHA AT IAV+GG+ +++YISEKV+G IGGSLF+VFA+TTA+GIF
Sbjct: 142 SFMEKVAETGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRFVSLVGSVGALAVMTIISVLIGQIFHAVPSGIAQGIPLDDVAAVLAFAFFGFKTLKESFDMEEGESVMDEELAEAEETVEESDTIRQRTAWAQIASTFGLVFAAEFGDRSFLSTIALSAAQNPVSVAGGAIAAHAIATAIAVSGGSYIAKYISEKVIGIIGGSLFLVFAVTTALGIF 358
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: A0A7S1FYG6_9STRA (GDT1 family protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYG6_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.070e-73 Identity = 138/226 (61.06%), Postives = 172/226 (76.11%), Query Frame = 2
Query: 398 TLPGALADASLADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQLPDDSSGIDNEKEEAEEEVKKVGTEKKASAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
T+ GA A AS + +GF+QAFSLVF+SEIGDKTFFIA LLA KTS+ V+F G++GALAVMTV++ ++G FHAVP+ +T +P DD AV AF FFG TLKD+Y L D S +D E +AE+ V+ T K+ + W I+ TF LVFAAEFGDRSFL+TIAL AAQNP SV GA+A HA AT IAV+GG+ +++YISEKV+GYIGG+LF+VFALTTA GIF
Sbjct: 138 TIAGAPA-ASFIESFASTGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSKFVSFVGSLGALAVMTVISCILGQIFHAVPSGITQGLPLDDVAAVVAFAFFGFKTLKDSYDLEDGESVMDEELADAEDAVEGSETIKQVTPWGQIISTFGLVFAAEFGDRSFLSTIALSAAQNPFSVCGGAIAGHALATAIAVSGGSYIAKYISEKVIGYIGGALFLVFALTTAYGIF 362
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: A0A7S0DTL7_9EUKA (GDT1 family protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DTL7_9EUKA) HSP 1 Score: 243 bits (619), Expect = 5.840e-73 Identity = 158/297 (53.20%), Postives = 206/297 (69.36%), Query Frame = 2
Query: 197 ALPQLA---ATRREAEGDAPSL-DGAGRVPARLPRAIVSICKWGAVAAVAGVALHLLPHPLVASAATELPVTLPGALADASLADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQLPDDSSGIDNEKEEAEEEVKKVGTEKKASAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
A P LA +R A A SL DG ++ +R +A ++ A AVAG+ + + P L+++ A V A + A + L GF QA SLVF SEIGDKTFFIAALLA + SRL+AF G++ ALA MT+++VLIG FH VP +LT +P DDY A+A +FG+ ++ DAY LPD+S+G+D E EEAE+E+ GT K + W L+L+ F+LVFAAE GDRSFL TIAL AAQNP+ VG GA+ AH+ ATGIAVA G++L++YISEKVVGY+GG LFIVFA+TTAVG+F
Sbjct: 89 AAPSLALQETSRSVANTKALSLRDGNQKIRSRARQAFAAV----ATLAVAGL-MAIAPGSLISAHAAGDVV----ASSAAGMGGPLVSGGFVQALSLVFASEIGDKTFFIAALLAMRASRLLAFGGSMLALASMTIISVLIGQIFHNVPTSLTGGLPLDDYAAIAFLGYFGVKSILDAYNLPDNSAGVDEELEEAEKEIS--GT-KADTQWQLLLEAFTLVFAAELGDRSFLATIALSAAQNPVMVGLGAILAHSLATGIAVASGSILAKYISEKVVGYVGGVLFIVFAITTAVGVF 373
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Match: A0A7S2X853_9EUKA (GDT1 family protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X853_9EUKA) HSP 1 Score: 241 bits (614), Expect = 1.560e-72 Identity = 156/291 (53.61%), Postives = 198/291 (68.04%), Query Frame = 2
Query: 203 PQLAATRREAEGDAPSLDGAGRVPARLPRAIVSICKWGAVAAVAGVALHLLPHPLVASAATELPVTLPGALADASLADRLTRSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLVAFAGAVGALAVMTVLAVLIGVAFHAVPAALTSTIPFDDYVAVAAFLFFGLNTLKDAYQLPDDSSGIDNEKEEAEEEVKKVGTEKKASAWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPLSVGFGALAAHASATGIAVAGGALLSQYISEKVVGYIGGSLFIVFALTTAVGIF 1075
P+ +A +R E +L LPR++ A+AAV G++L L ASA LP P AL + GFFQA SLVF SEIGDKTFFIAALLA ++SRL+AF+G++ ALA MTV++VLIG FH VPA++T +P DDY A+A +FG+ ++ DAY LPD+SSG+D+E EEAE+EV K + LI++ F+LVF AE GDRSFL TIAL AAQNP+ VG GA+ AH+ ATGIAVA GALL++YISEKVVGYIGG LF+ FA+TTA G+F
Sbjct: 81 PRSSAAQRTKENQGATL---------LPRSLPKKTLAAALAAV-GLSLAAPGAMLAASAFPALPAA-PAALMN---------GGFFQALSLVFASEIGDKTFFIAALLAMRSSRLLAFSGSMLALATMTVISVLIGQVFHNVPASITGGLPLDDYAAIAFLGYFGVKSILDAYNLPDESSGVDDELEEAEKEVSGA---KGDTQLQLIIEAFTLVFTAELGDRSFLATIALSAAQNPVMVGAGAILAHSLATGIAVASGALLAKYISEKVVGYIGGVLFLAFAVTTAAGVF 348 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1409.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1409.4.1 >prot_P-wetherbeei_contig1409.4.1 ID=prot_P-wetherbeei_contig1409.4.1|Name=mRNA_P-wetherbeei_contig1409.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=330bp MSSRVHVGALAAIPSRSHQIATFRKPCMPPSCIRCMALPQLAATRREAEGback to top mRNA from alignment at P-wetherbeei_contig1409:3888..6242- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1409.4.1 ID=mRNA_P-wetherbeei_contig1409.4.1|Name=mRNA_P-wetherbeei_contig1409.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2355bp|location=Sequence derived from alignment at P-wetherbeei_contig1409:3888..6242- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1409:3888..6242- >mRNA_P-wetherbeei_contig1409.4.1 ID=mRNA_P-wetherbeei_contig1409.4.1|Name=mRNA_P-wetherbeei_contig1409.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=990bp|location=Sequence derived from alignment at P-wetherbeei_contig1409:3888..6242- (Phaeothamnion wetherbeei SAG_119_79)back to top |