mRNA_P-wetherbeei_contig1407.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: A0A150GX05_GONPE (Pre-mRNA-processing factor 19 n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GX05_GONPE) HSP 1 Score: 258 bits (660), Expect = 2.750e-75 Identity = 190/554 (34.30%), Postives = 273/554 (49.28%), Query Frame = 2
Query: 17 VVSAKSGHVFEKRLILKALEQEEKVN*GKWHCDQIAWCNHVLCHLPPIARHKPVLYFFWR*SRRSASLLAVSVQCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEARADLLEHRVGISEAIEAAVLPDEEPTAAPPTG-----LGFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQLLHRTYVAGITCLTVHPERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKK---KYEMVTKYKNHGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECFKVQTNA---AGGPLSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAATALAFNENGYLLATGGADGIVNMWDLRTQKNLDFMNVGSH--LNALAFDQSGTYLAALGKSDARVFRAKERTL----VGEYPRAAKAMTGIAWGPDARWLVVSSMDRSVRVF 1627
VVS KSGH+FEK LI K + + K CPVTG PL+ DL+P+ K PR + ++PG+++ EW+ + E + R L + RQ+L+ AL+Q AA R+IARL ERDEARA L + + + + AA AP G G D +A M E LS R+KR P L TAD++ +S + LH+T GI + V+P+++ + +T G+D +FD G L +GH+KR V++ S L VS S DRT R W K E + ++ + K+H +EVV V VHP +F +AS D +WA YD + C + Q A G P +CL FHPDG ++GTG + +W++K + PVA H GA LAF+ENGY +A+ +D V +WDLR N + S ++AFD SG YLA G + +V+ K++ + E P+ A A+ WGPDAR L+V + D ++RVF
Sbjct: 14 VVSVKSGHLFEKSLIDKYVRETGK--------------------------------------------------CPVTGEPLSTEDLLPLKVNKTVKPRTAPATSIPGLLSLFHDEWDANMLELYNTRTQLHQTRQELSHALYQHDAATRVIARLMKERDEARAALADLKQQYAADLAAAQSARAAADVAPAEGGRRAKAGIPDDVIADMAEVNATLSKGRKKRPLPDSLATADDLASL--SLSGSHPLHKTTAGGIAAMDVNPQQQGVVVTAGVDGSLQLFDYLQGRVLHSLEGHSKRCTGVAYIASD---LIVSTSADRTARAWRSKAEGGEGEVSWQCASVLKDHTAEVVGVTVHPSRRYFVTASSDASWAFYDTASLTCLR-QVGADEGPGEPYTCLQFHPDGLILGTGTEGKA-IRIWEVKSQK-PVAACEGHAGAIRFLAFSENGYHMASA-SDDCVKLWDLRKLSNFKTLEPFSDGTCASVAFDHSGQYLAVGGPA-VKVYGQKQQWAELRSLAEVPKRAAALR---WGPDARSLLVGAADHNLRVF 504
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: A0A061S8V8_9CHLO (Pre-mRNA-processing factor 19 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8V8_9CHLO) HSP 1 Score: 253 bits (646), Expect = 1.390e-73 Identity = 185/550 (33.64%), Postives = 267/550 (48.55%), Query Frame = 2
Query: 8 DELVVSAKSGHVFEKRLILKALEQEEKVN*GKWHCDQIAWCNHVLCHLPPIARHKPVLYFFWR*SRRSASLLAVSVQCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEARADLLEHRVGISEAIEAAVLPDEEPTAAPPTGL---GFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQLLHRTYVAGITCLTVHP--ERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKKKYEMVTKYKNHGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECF-KVQTNAAGGPLSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAATALAFNENGYLLATGGADGIVNMWDLRTQKNLDFMNV--GSHLNALAFDQSGTYLAALGKSDARVFRAKER-TLVGEYPRA-AKAMTGIAWGPDARWLVVSSMDRSVRVF 1627
+E VVS SGH+FEKRLILK LE + + CPVTG L+ DL+ + K PR ++++PG++ Q EW+ L+ E+H L+++L + RQ+L+ AL+Q A+ R+IARL ERDEAR+ L + +E P E AA G T A M ET KLS R+KR P D+I ++ + LH+T GI + + P + T G D VFD G +G GH+KRV +V++ L+ S D T R+W K + +E V K H +V + +HP G FF SAS D WA YD++ +C KV + P +C +FHPDG ++GTG +N V +W+++ VA H G T+L+F+ENGY LAT DG V +WDLR KN + + AFD SG +LA +G DARV+ K+ +V P +K + +AWG A+ + V + D S+R++
Sbjct: 11 EEPVVSRSSGHLFEKRLILKHLETDPR--------------------------------------------------CPVTGEELSKDDLLDLQTNKAVKPRTAPASSIPGLLGLFQNEWDALMLESHNLKQNLHKLRQELSHALYQHDASCRVIARLIKERDEARSALAQATRAAPADMENGKRPAESEDAAQEAKRAKSGITSEAEALMTETSAKLSKSRKKRTIPEGTAGQDDIEAL--ALASSHPLHKTTKGGINHIAICPFVAGSKLLATAGNDGTVQVFDGDKGQVVGELAGHSKRVNNVAFVGGPDALITASA--DSTVRMW---KGGDESFECVHVCKEHSQDVQGLTLHPTGKFFISASADATWAFYDVDTADCMLKVSDSNVTAPYTCASFHPDGLILGTGGTDNA-VRIWEVRS-SKNVATFDTHTGPITSLSFSENGYYLATSATDG-VKLWDLRKLKNFKTLTPYDSDTTSCCAFDSSGYWLA-VGGGDARVYGVKQDWKVVKTLPDVPSKGVLSLAWGELAKTIAVGAADHSLRIY 499
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: A0A835YI40_9STRA (Pre-mRNA-processing factor 19 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI40_9STRA) HSP 1 Score: 252 bits (644), Expect = 2.950e-73 Identity = 174/548 (31.75%), Postives = 265/548 (48.36%), Query Frame = 2
Query: 17 VVSAKSGHVFEKRLILKALEQEEKVN*GKWHCDQIAWCNHVLCHLPPIARHKPVLYFFWR*SRRSASLLAVSVQCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEARADLLEHRVGISEAIEAAVLP------DEEPTAAPPTGLGFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQLLHRTYVAGITCLTVHPERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKKKYEMVTKYKNHGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECFK-VQTNAAGGPLSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAAT-ALAFNENGYLLATGGADGIVNMWDLRTQKNLDFMNVGSHLNA---LAFDQSGTYLAALGKSDARVFRAKERTLVGEYPRAAKAMTGIAWGPDARWLVVSSMDRSVRVF 1627
VVS K+GH+FE+RLI K ++ E K CP+TG PL DL+ V + KV PR + ++PG++A MQ EW+ L+ E + L++ LD RQ+L+QAL+QQ A+ R+IARL ERDEAR L R +++A + EP D ++ + T+ L+ R+KR P DL +AD++ + + S Q LH+T AGITCL + P+ ++ LTGG+DK ++F+ +G L GH+K+V V++ LL S D T + W + ++ ++ H EV + HP G + A+A D AW +++E+ C + V+ C +HPDG ++GTG + V +WD+K + VA H G ++AF+ENGY +A R KN + +GS + FD SGTYLA + +V KE L + K +TG+A+ P A+ L +SMDR++R F
Sbjct: 14 VVSRKTGHLFERRLIEKYIDAEGK--------------------------------------------------CPITGEPLGVDDLMDVKSNKVVRPRPATATSIPGLLALMQNEWDDLMVETYTLKQHLDTTRQELSQALYQQDASARVIARLMRERDEARQQLQAQRAALAQAXXXXXXXXXXXXMEVEPAVVEDIPAKIADTVMSELTNTWKALTKSRKKRVIPVDLVSADDMANWVEASS--QTLHKTTPAGITCLALSPQDASLTLTGGVDKTAILFNRESGVQSALLSGHSKKVLDVAFGKGGEVLLTASA--DGTAKSWDLEGM------LLHTFQGHKGEVTAICGHPTGRYAATAGRDKAWGFHELESGSCLRLVKEEGFEAGYECARWHPDGLILGTGT-GDAQVRIWDMKTQN-NVASFKGHEGGVVGSIAFSENGYYMAXXXXXXXXXXXXXRKLKNFHTLTLGSAAGTPVVVTFDHSGTYLAVSANTTIQVHVVKEWALATTLGQFKKPITGVAFAPSAKSLAATSMDRTLRFF 499
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: C1MLI6_MICPC (Pre-mRNA-processing factor 19 n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MLI6_MICPC) HSP 1 Score: 251 bits (642), Expect = 5.640e-73 Identity = 187/555 (33.69%), Postives = 272/555 (49.01%), Query Frame = 2
Query: 2 MADEL-VVSAKSGHVFEKRLILKALEQEEKVN*GKWHCDQIAWCNHVLCHLPPIARHKPVLYFFWR*SRRSASLLAVSVQCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEARADLLEHRVGISEAI----EAAVLPDEEPTAAPPTGL------GFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQLLHRTYVAGITCLTVHPERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKKKYEMVTKYKN-HGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECFKVQTNAAGGPLSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAATALAFNENGYLLATGGADGIVNMWDLRTQKNLDFMNVGSHLNALAFDQSGTYLAALGKSDARVFRAKERTLVGEYPRAAKA-MTGIAWGPDARWLVVSSMDRSVRVF 1627
+A EL VVS KSGH+FEK LI KA+++ K CP+T L D++P+ R +A++PG++AT EW+ L+ E HQL++DL RQ+L+ +L+Q AA R+IARL ERDEARA L+ + A + D++ P +G G + +Q +LS MR+KR T P L + + I Y + + H+T GI L ++P I T G D +FD++ G L GH KR+ SV+W A L VSGS D+ +VW ++E Y+ + K+ H ++VV V+ HP + S DG WALYDI A EC + + C FHPDG + TG ++ V LWD+K + VA L H GA A +F+ENGY +AT ADG V +WDLR KN +N S+ ++ FD SG YLA +G +A V+ K+ V + K +T +++ PDA L + + D ++RV+
Sbjct: 8 VAPELPVVSVKSGHLFEKSLIAKAIQETGK--------------------------------------------------CPITKIALTLDDIIPITGNPAVNSRVFANASIPGMLATFHNEWDALMLETHQLKKDLHSVRQELSVSLYQHDAACRVIARLVKERDEARAALVNVQASGRSASTMGKRTSTAADDDVAFDPVSGSTKRSKSGIPTDVIDVLQSKSAELSKMRKKRETAPSLSSPEAIKLY--DLKLASPCHKTSTHGIYSLALNPGTPAIVATAGADGTLALFDASVGKRSTLLTGHGKRINSVAW---AGSNLLVSGSNDKLVKVW--RQESSGTYKCTSTIKDVHNNDVVAVSTHPTNTYACSVGADGLWALYDIVAAECLSSVKDDSDSRYLCGGFHPDGLIFATG-GDDSFVKLWDMKTQK-SVARLTGHTGAVAAHSFSENGYYVATAAADG-VKLWDLRKLKNFMSINAVSNATSVVFDSSGRYLA-VGGIEATVYDVKKDWEVVKVWEVKKGPVTALSFAPDATALYLGAGDHNLRVY 501
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: UPI001FB0837B (pre-mRNA-processing factor 19 homolog 1-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0837B) HSP 1 Score: 249 bits (637), Expect = 5.390e-72 Identity = 174/503 (34.59%), Postives = 265/503 (52.68%), Query Frame = 2
Query: 236 QCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEARADLLE--HRVGISEAIEAAV----------LPDEEPTAAPPTG----LGFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQL----LHRTYVAGITCLTVHPERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKKKYEMVTKYKNHGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECFKVQTNAAGGPLSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAATALAFNENGYLLATGGADGIVNMWDLRTQKNLDFMNV---GSHLNALAFDQSGTYLAALGKSDARVFRA----KERTLVGEYPRAAKA--MTGIAWGPDARWLVVSSMDRSVRVFGEHPTGQ*PS 1657
+CP+TG PL+ D+VP+ K+ PR +A++PG++ Q EW+ L+ L + L RQ+L+ AL+Q AA R+IARL ERDEAR L++ + + + EA V P +E P G G + + + + + LS R+KR+ P L TAD I Y TQL LH+T GI L + + +I T G+D V+FD +G L GH+K+V SV + A L V+GS D+T RVW K+ ++ Y+ K+H +EV V VH +F +AS D W YD+ + C + G + +FHPDG ++GTG ++ +V +WD+K + + A H GA TA++F+ENGY LAT DG V +WDLR +N ++ + ++ FD SG+YLA G +D RV++ E + +P + T + +G D +++ V SMDR++R+FG G+ PS
Sbjct: 37 KCPITGEPLSMDDIVPLKTGKIVKPRPMQAASIPGMLGMFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEAREFLVQADRTMPMPASAEATVNAPGLTNGKRAPGDEDLG--PAGKKIRAGISTSIIGELTDCNSALSQQRKKRQISPTLATADSIERY------TQLNSHPLHKTSKPGILALDILSSK-DIIATAGIDANAVIFDRPSGTVLSTLSGHSKKVTSVKFVSRAD--LVVTGSADKTVRVW--KESEQGNYDCRHVLKDHTAEVQAVTVHATNSYFVTASLDNTWCFYDLSSGLCLTQVESPGSGGYTAASFHPDGLILGTGT-SDASVKIWDVKSQTV-AATFDGHVGAVTAISFSENGYFLATAAHDG-VKLWDLRKLRNFRTFSLYDENTPTQSVDFDHSGSYLAIAG-ADTRVYQVANVKSEWNCIKTFPDLSGTGKATCVKFGDDGKYIAVGSMDRNLRIFGLPEGGEAPS 522
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: UPI001CFAD0C5 (pre-mRNA-processing factor 19 homolog 1-like n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CFAD0C5) HSP 1 Score: 249 bits (637), Expect = 5.950e-72 Identity = 176/494 (35.63%), Postives = 269/494 (54.45%), Query Frame = 2
Query: 236 QCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEARADLLE-------HRVGISEAIEAAVLPDE----EPTAAPPTGL----GFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQLLHRTYVAGITCLTVHPERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKKKYEMVTKYKNHGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECF-KVQTNAA--GGP--LSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAATALAFNENGYLLATGGADGIVNMWDLRTQKNL---DFMNVGSHLNALAFDQSGTYLAALGKSDARVFRAK----ERTLVGEYPRAAKA--MTGIAWGPDARWLVVSSMDRSVRVFG 1630
+CP+TG P A D+VP+ K+ PR +A++PG++ Q EW+ L+ L + L RQ+L+ AL+Q AA R+IARL ERDEARA L E S A+VL + E + P G G + + + ++ + LS R+KR+ PP L AD + Y Q+S + LH+T GI + +H + ++ TGG+D ++FD ++G L GH+K+V S+ + +LL S D+T R+W +E Y+ ++H +EV V VH D+F +AS DG W YDI + C +V N+ G P + AFHPDG ++GTG + V +WD+K + VA+ H GA TA++F+ENGY LAT DG V +WDLR KN +F + + N++ FD SG+YLA G +D R+++ E + +P + T + +GPD++++ V SMDR++R+FG
Sbjct: 37 KCPITGEPHAMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAEVDRQVMPMAASASLTSNASVLTNGKRALESEDSGPDGKKLRPGISSSIITKLTDCNASLSQQRKKRQIPPSLSPADALERY-TQLS-SHPLHKTNKPGIVSIDIHYPK-DVIATGGVDSNAILFDRSSGQILTTLSGHSKKVTSLKFVAEGDQLLTCSA--DKTVRLWQGSEEGN--YDCRHILRDHIAEVQAVTVHATNDYFVTASLDGTWCFYDISSGLCLTQVADNSGPEGRPEGYTSAAFHPDGLILGTGT-SEALVKIWDVKSQA-NVAKFDGHVGAVTAISFSENGYYLATAAYDG-VKLWDLRKLKNFRSFEFNDSDTPTNSVDFDHSGSYLAIAG-ADIRIYQVASVKAEWNCIKTFPDLSGTGKATCVKFGPDSKYIAVGSMDRNLRIFG 519
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: A0A4Y7L8Z3_PAPSO (Pre-mRNA-processing factor 19 n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L8Z3_PAPSO) HSP 1 Score: 249 bits (635), Expect = 9.330e-72 Identity = 190/566 (33.57%), Postives = 276/566 (48.76%), Query Frame = 2
Query: 8 DELVVSAKSGHVFEKRLILKALEQEEKVN*GKWHCDQIAWCNHVLCHLPPIARHKPVLYFFWR*SRRSASLLAVSVQCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEARA--DLLEHRVGISEAIEAA-------------VLPDEEPTAAPPTGLGFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQLLHRTYVAGITCLTVHPERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKKKYEMVTKYKNHGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECF-KVQTNAAGGPLSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAATALAFNENGYLLATGGADGIVNMWDLRTQKNLDFM---NVGSHLNALAFDQSGTYLAALGKSDARVFRA----KERTLVGEYPRAAKA--MTGIAWGPDARWLVVSSMDRSVRVFG 1630
+E VVS K+GH+FEKRL+ + +E K CPVTG PL DL+PV K PR +A++PG++ Q EW+ L+ L + L RQ+L+ AL+Q AA R+IARL ERDEAR L E V + + A V D + + P G + +A + + LS R+KR+ P L D + Y Q+S + LH+T GI + +HP + +I TGG+D +VFD +G L GH+K+V SV + P V+ S D+T RVW ++ Y K+H +EV V VH ++F SAS D W YD+ + C +V + G + AFHPDG ++GTG + NV +WD+K + VA+ H G +A++F+ENGY LAT DG V +WDLR +N + + N++ FD SG+YLA G SD RV++ E V +P + T + +GP+A++L V SMDR++R+FG
Sbjct: 11 EEPVVSKKTGHLFEKRLVERHVEDFGK--------------------------------------------------CPVTGEPLTMDDLMPVKTNKAVKPRPLQAASIPGLLGMFQIEWDQLMLSHFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARTLLTLAERHVPLPASTTANDSTFNNGKRAAEDVNMDHDGKRSLP---GISADIIADLTDCNTLLSQQRKKRQIPSTLAPVDALERY-TQLS-SHPLHKTNRPGILSVDIHPSK-DIIATGGVDTNAIVFDRTSGQILSTLSGHSKKVTSVKFVPKDD--FFVTASADKTVRVWQGSEDGN--YNCRHVLKDHIAEVQAVTVHATNNYFVSASLDSTWCFYDLTSGSCLTQVGDTSDGDGYTSAAFHPDGLILGTGT-SQANVRIWDVKSQS-NVAKFEGHSGPVSAISFSENGYFLATAADDG-VKLWDLRKLRNFRTFAPYDSNTSTNSVDFDHSGSYLAIAG-SDIRVYQVANVKSEWNCVKTFPDLSGTGKATSVKFGPNAQYLTVGSMDRNLRIFG 512
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: A0A8J4CXV3_9CHLO (Pre-mRNA-processing factor 19 n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4CXV3_9CHLO) HSP 1 Score: 248 bits (633), Expect = 1.350e-71 Identity = 180/557 (32.32%), Postives = 267/557 (47.94%), Query Frame = 2
Query: 8 DELVVSAKSGHVFEKRLILKALEQEEKVN*GKWHCDQIAWCNHVLCHLPPIARHKPVLYFFWR*SRRSASLLAVSVQCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEAR---ADLLEHRVGISEAIEAAVLPDEEPTAAPPTGL-----GFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQLLHRTYVAGITCLTVHPERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKKKYEMVTKYKNHGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECFKV--QTNAAGGPLSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAATALAFNENGYLLATGGADGIVNMWDLRTQKNLDFMNV--GSHLNALAFDQSGTYLAALGKSDARVFRAKER-TLVGEYPRAAKAMTGIAWGPDARWLVVSSMDRSVRVFGEHP 1639
++ VVSAKSGH+FEK LI K + + K CPVTG L+P DL+PV K PR + ++PG+++ EW+ + E H R L + RQ+L+ AL+Q AA R+IARL ERDEAR AD+ + A +AA G G + +A M E LS R+KR P L T +++ + +S + LH+T GI L V+P+++ + +T G+D +FD +G +GHTKR V++ S L VS S D+T RVW D ++ + ++H +EVV V HP +F + S D +WA YD+E C + G P + + FHPDG ++GTG + +W+++Q+ VA H G LAF+ENGY LA+ +D V +WDLR N + ++AFD SG YLA +G ++F K++ + + +K + WGPDAR L+V + D ++RVFG P
Sbjct: 11 EQAVVSAKSGHLFEKSLIEKYVRETGK--------------------------------------------------CPVTGEALSPEDLLPVKVNKTVKPRTAPATSIPGLLSLFHDEWDATMLELHNTRTQLHQTRQELSHALYQHDAATRVIARLLKERDEARTALADMKQQYAADLAAAQAAXXXXXXEAKPEVEGGRKAKGGIPEDIIADMVEVNTTLSKGRKKRPLPDTLATPEDLASF--TLSGSNPLHKTTAGGIAALDVNPQQQGMVVTAGLDATLQLFDYLQARLMGSLEGHTKRCTGVAFMNSE---LIVSSSADKTARVWRSG-GDAMAWQCASVLRDHTAEVVGVTAHPSKRYFVTGSTDASWAFYDVETTTCLRQIGADEGPGEPYTYVQFHPDGLILGTGTEAKA-IRIWEVRQQKA-VAACEGHAGPIRCLAFSENGYHLASA-SDDCVKLWDLRKLANFKTIEPFPDGPCASVAFDHSGQYLA-VGGPVVKIFGQKQQWSELKTLTEISKRAAALRWGPDARTLLVGAADHNLRVFGVPP 507
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: A0A7S2DSX7_9STRA (Pre-mRNA-processing factor 19 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DSX7_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.650e-71 Identity = 165/540 (30.56%), Postives = 265/540 (49.07%), Query Frame = 2
Query: 17 VVSAKSGHVFEKRLILKALEQEEKVN*GKWHCDQIAWCNHVLCHLPPIARHKPVLYFFWR*SRRSASLLAVSVQCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEARADLLEHRVGISEAIEAAVLPDEEPTAAPPTGLGFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQLLHRTYVAGITCLTVHPERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKKKYEMVTKYKNHGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECFK-VQTNAAGGPLSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAATALAFNENGYLLATGGADGIVNMWDLRTQKNLDFMNVGSHLNALAFDQSGTYLAALGKSDARVFRAKERTLVGEYPRAAKAMTGIAWGPDARWLVVSSMDRSVRVFGE 1633
VVS K+GH+FEKRL+ + L E+K CPVTG PL DL+PV A + PR + ++PG+++ Q EW+ ++ E + L++ LD R++L+Q L+Q AA R+IARL E +EAR+ L + + ++E A V + TD L +M +LS R++R P+L +A +++ + T H + GITC+ +HP + L+GGMDK ++FD A L GHTK++ + +HP A+K + ++ S D+ ++W+ + Y +H +EV ++VHP G++ A+ D AW + I+ K V LSC+ FHPDG ++GTG ++ V +WD+K + L V H+ A L+F+ENGY +A+ KN+ + + S A++FD SGTYLAA + ++ KE T V K +T ++ DA + +SMDRS++ +G+
Sbjct: 29 VVSRKTGHLFEKRLVEQFLSSEDK--------------------------------------------------CPVTGEPLTVDDLLPVQATQTTKPRPITATSIPGLLSHFQNEWDTVMLETYTLKQHLDNTRKELSQVLYQHDAACRVIARLTRELNEARSMLSQRQGQMAEEAAAVVAGESMEVEQSAVLAEITDDDLNKMITKGAQLSQGRKRRPIAPNLASAQDLS--ESVVLATATPHSSVKQGITCIDMHPGSVDTTLSGGMDKNAIIFDHANNKVLATLTGHTKKLTACKFHPDASKAVVITASADKLTKIWSAD-ASRSVYSEAFTLDSHQAEVTDMSVHPTGEYLATVGRDNAWCFHSIDRGLTLKRVVCQGDNAGLSCVQFHPDGLILGTGTEDS-MVRIWDMKSQKL-VHSFEGHKDAVHDLSFSENGYYMASVAXXXXXXXXXXXKLKNVKTLQLSSPGLAVSFDHSGTYLAAATGNSVKINLVKEWTEVTTLQGHTKDVTSLSISKDASRIYTASMDRSIKSWGK 513
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Match: A8I9S6_CHLRE (Pre-mRNA-processing factor 19 n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8I9S6_CHLRE) HSP 1 Score: 248 bits (632), Expect = 1.670e-71 Identity = 178/554 (32.13%), Postives = 266/554 (48.01%), Query Frame = 2
Query: 17 VVSAKSGHVFEKRLILKALEQEEKVN*GKWHCDQIAWCNHVLCHLPPIARHKPVLYFFWR*SRRSASLLAVSVQCPVTGNPLAPADLVPVHAAKVPCPRAPGSATVPGIIATMQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEARADLLEHRVGISEAIEAAVLPDEE--------PTAAPPTGLGFTDARLARMQETYDKLSAMRRKRRTPPDLKTADEINGYRDQISVTQLLHRTYVAGITCLTVHPERRNIFLTGGMDKMCVVFDSATGNNLGLCQGHTKRVKSVSWHPSATKLLAVSGSMDRTCRVWTPKKEDKKKYEMVTKYKNHGSEVVTVAVHPCGDFFASASYDGAWALYDIEAEECFKVQTNA---AGGPLSCLAFHPDGFVMGTGMRNNGNVHLWDLKQRGLPVAELPCHRGAATALAFNENGYLLATGGADGIVNMWDLRTQKNLDFMN--VGSHLNALAFDQSGTYLAALGKSDARVFRAKER----TLVGEYPRAAKAMTGIAWGPDARWLVVSSMDRSVRVF 1627
VVS KSGH+FEK LI K + + K CPVTG PL+ DL+P+ K PR + ++PG+++ EW+ + E H R L + RQ+L+ AL+Q AA R+IARL ERDEARA L + + + + A E P A G + +A M E LS R+KR P L +AD+I ++ + LH+T GI + V+P+++ + +T G+D +FD L +GHTKR VSW + + VS S D+T RVW E ++ + ++H +EVV V HP +F + S D +WA YD+ + C + Q A G P +CL FHPDG ++GTG + +W++K + VA H GA +LAF+ENGY +A+ +D + +WDLR N + +AFD SG YL +G +++ K++ + E P+ A A+ WGPDAR ++V + D ++RVF
Sbjct: 14 VVSTKSGHLFEKSLIEKYVRETGK--------------------------------------------------CPVTGEPLSTEDLLPLKVNKTVKPRTAPATSIPGLLSLFHDEWDANMLELHNTRTQLHQTRQELSHALYQHDAATRVIARLLKERDEARAALADMKQQYAADVAAXXXXXXEGGGEGGRRPKA------GIPEDVIADMTEVNATLSKGRKKRPLPDSLASADDIAAM--TLAGSHPLHKTTAGGIAAIDVNPQQQGVVVTAGVDTTLQLFDYLQTRVLASLEGHTKRCTGVSWVAAD---VIVSSSADKTARVWRAGGEGGSEWSCASVLRDHTAEVVGVTTHPSRRYFVTGSTDASWAFYDVASLTCLR-QVGADEGPGEPYTCLQFHPDGLILGTGTEGKA-IRIWEVKAQKA-VAACEGHAGAIRSLAFSENGYHMASA-SDDCIKLWDLRKLANFKTIEPYTDGPCTTVAFDHSGQYLV-VGGPVVKIYGQKQQWAELKTLSEVPKRASALR---WGPDARSVLVGAADHNLRVF 498 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1407.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1407.1.4 >prot_P-wetherbeei_contig1407.1.4 ID=prot_P-wetherbeei_contig1407.1.4|Name=mRNA_P-wetherbeei_contig1407.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=433bp MQAEWEVLLEEAHQLRRDLDEQRQQLNQALFQQAAAQRLIARLADERDEAback to top mRNA from alignment at P-wetherbeei_contig1407:1531..5679- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1407.1.4 ID=mRNA_P-wetherbeei_contig1407.1.4|Name=mRNA_P-wetherbeei_contig1407.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4149bp|location=Sequence derived from alignment at P-wetherbeei_contig1407:1531..5679- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1407:1531..5679- >mRNA_P-wetherbeei_contig1407.1.4 ID=mRNA_P-wetherbeei_contig1407.1.4|Name=mRNA_P-wetherbeei_contig1407.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1299bp|location=Sequence derived from alignment at P-wetherbeei_contig1407:1531..5679- (Phaeothamnion wetherbeei SAG_119_79)back to top |