mRNA_P-wetherbeei_contig14043.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: A0A2E9KZM3_9DELT (Phytanoyl-CoA dioxygenase n=3 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A2E9KZM3_9DELT) HSP 1 Score: 255 bits (652), Expect = 2.430e-82 Identity = 122/227 (53.74%), Postives = 150/227 (66.08%), Query Frame = 1
Query: 1 RLLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSHRLGEFSHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGH 681
R+L P +RP+ + H+ GV F + DP ++D +EQ+IGPDI+LW +FCKP T G+EVP HQDG YWPIRP AT TVW+ALD V +NGCMRV+PGSHR +H+ REDLVLN +ND RI E ++EL GQ S+HDV LVHGS N SG+RRAG AIRYMPSTSL++R L G V F QRP+WL+RGE+R G N VGH
Sbjct: 41 RVLVNNPEVRPEKLVSVHISGLNQEGVHGDEAFMELAKDPMIVDCVEQLIGPDIILWGCQLFCKPGTDGMEVPMHQDGAYWPIRPLATCTVWVALDRVTAENGCMRVVPGSHRHQSLTHQKESREDLVLNQSVNDGRIDPENTVSLELAPGQFSMHDVHLVHGSHPNRSGKRRAGLAIRYMPSTSLFNRDLIDTGTGSGYLVNFAQRPLWLIRGENRAGSN-LKVGH 266
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: Q129L5_POLSJ (Phytanoyl-CoA dioxygenase n=4 Tax=Polaromonas TaxID=52972 RepID=Q129L5_POLSJ) HSP 1 Score: 251 bits (642), Expect = 8.240e-81 Identity = 116/229 (50.66%), Postives = 152/229 (66.38%), Query Frame = 1
Query: 4 LLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSHR---LGEFSHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGH 681
L+ P +RP+ + H+ GV R+FFD +P ++D++ Q+IGPD++LW VFCKPA+ G E PWHQDG YWPIRP A TVW+AL+ +NGC+RVIPGSH L HE +R DL LN + + + A ++ELE GQ+SLHD+ ++HG+QANTSG RR G A+RYMP TSL+DRSL PV F RP+WL+RGEDR G+NDF+VGH
Sbjct: 39 LIRNNPGVRPEKLVSAHIEGHNDEGVRGNRDFFDLAMNPDIVDLVTQVIGPDVILWGCHVFCKPASEGFETPWHQDGHYWPIRPLANCTVWVALEPSTRENGCLRVIPGSHAAKVLHPHLHE--DRTDLTLNQRMAEGSFDVNDAVDLELEPGQMSLHDIYMIHGAQANTSGIRRTGVALRYMPGTSLFDRSLRPSDGETGVPVSFATRPLWLLRGEDRTGRNDFSVGH 265
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: A0A349SGE5_9GAMM (Phytanoyl-CoA dioxygenase n=5 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349SGE5_9GAMM) HSP 1 Score: 249 bits (636), Expect = 6.270e-80 Identity = 116/229 (50.66%), Postives = 154/229 (67.25%), Query Frame = 1
Query: 1 RLLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSHRLGE-FSHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGHE 684
RL+ P +RP+ + H+ GV FF SDP ++D + Q++GPD+VLW VFCKPA+ G+EVP HQDG YWPI P + T W+A+DD ++NGC+R++PGSH+ F H +SERE LVLN ++D + L A ++EL AGQ SLHD+ ++HGS AN SG+RRAG AIRYMP TSL DR + G+S V +K RP+WL+RGE+R G ND VGHE
Sbjct: 39 RLIANNPDVRPERLVSVHIDRMNDEGVRGDAAFFKLASDPLIVDAVSQVMGPDVVLWGCQVFCKPASDGMEVPMHQDGHYWPIDPLESCTAWVAIDDSTIENGCLRLVPGSHKARRSFQHGLSEREGLVLNQYVDDPEVDLSVAEDVELRAGQFSLHDIHMIHGSNANRSGKRRAGVAIRYMPGTSLMDRESSRTGSSSGYMVNWKTRPLWLLRGENRAG-NDLEVGHE 266
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: A0A349K1U5_9BACT (Phytanoyl-CoA dioxygenase n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A349K1U5_9BACT) HSP 1 Score: 248 bits (633), Expect = 2.540e-79 Identity = 120/228 (52.63%), Postives = 153/228 (67.11%), Query Frame = 1
Query: 4 LLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSHRLGEF-SHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGHE 684
++ A P RP+ + H +G GV F + D +LD+IEQ+IGPDIV+W FCKPA G+EVPWHQDG YWPI P ATVT WIA+DD V+NGC+RVIP SH + +H V +R+D+VLN + ++ A +IELEAGQ+SLHDV L+HGS N S RRAG AIRYMP+TSL+DR AS V+F RPIW+VRG+DR G+NDF +GH+
Sbjct: 39 VIAANPETRPEQLISVHTREKGVEGVVGDEMFLELARDRQILDLIEQLIGPDIVMWGCQAFCKPAGDGMEVPWHQDGHYWPINPLATVTAWIAIDDSIVENGCLRVIPDSHLDQQLHTHLVEDRKDVVLNQRVKNSHFDENSAVDIELEAGQLSLHDVYLIHGSNPNRSPHRRAGLAIRYMPATSLFDRESGGADASAGYMVDFSTRPIWIVRGQDRTGRNDFLIGHQ 266
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: A0A2E0V5L9_9BACT (Phytanoyl-CoA dioxygenase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A2E0V5L9_9BACT) HSP 1 Score: 245 bits (625), Expect = 3.110e-78 Identity = 120/227 (52.86%), Postives = 150/227 (66.08%), Query Frame = 1
Query: 4 LLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSHRLGEF-SHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGH 681
++ A P RP+ + H G GV F D + +LD++ Q+ GPD++LW FCKPA G+EVPWHQDG YWPIRP AT TVW+A+DD ++NGC+RVIPGSHR SH V +R D+VLN + + A ++ELEAGQ+SLHDV L+HGS N S RRRAG AIRYMP+TSL+DR + AS V+F RPIWLVRGEDR G+NDF GH
Sbjct: 39 VIAANPDTRPEQLVSIHTESRGAEGVRGNELFLDLARNGEILDLVAQLAGPDLILWGCQAFCKPAGDGMEVPWHQDGHYWPIRPLATCTVWVAIDDSVIENGCLRVIPGSHREQILHSHLVEDRTDVVLNQRVEEGFFDESTAVDVELEAGQMSLHDVYLIHGSNPNRSPRRRAGLAIRYMPATSLFDRDRS-ADASAGYMVDFSARPIWLVRGEDRTGENDFIAGH 264
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: A0A7W5D8E4_9BURK (Ectoine hydroxylase-related dioxygenase (Phytanoyl-CoA dioxygenase family) n=1 Tax=Variovorax sp. Sphag1AA TaxID=2587027 RepID=A0A7W5D8E4_9BURK) HSP 1 Score: 244 bits (624), Expect = 4.270e-78 Identity = 115/230 (50.00%), Postives = 151/230 (65.65%), Query Frame = 1
Query: 4 LLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSH---RLGEFSHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGHE 684
L+ P +RP+ + H+ + GV + F + DP L++++ +IG D++LW VFCKPA G E PWHQDG YWPIRP AT TVW+AL+D NGC+RVIPGSH RL + HE +R DL L L + A ++EL AG++SLHDV ++HG++ NTS RRR G A+RYMPSTSL+DRSL PV+F +RP+WLVRG DRCG NDF+VGH+
Sbjct: 39 LIRNNPGVRPEKLVSAHIEGDNGEGVRGSAAFLELARDPELVELVSSVIGDDVILWGCHVFCKPAGNGYETPWHQDGHYWPIRPLATCTVWVALEDSDTGNGCLRVIPGSHKEKRLHDHLHE--DRTDLTLAQRLAPGTFDEDTAVDVELAAGEMSLHDVHMIHGARPNTSNRRRTGVALRYMPSTSLFDRSLRPVDGKSGVPVDFARRPLWLVRGVDRCGGNDFSVGHK 266
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: A0A1E4ZYK2_9GAMM (Phytanoyl-CoA dioxygenase n=1 Tax=Chromatiales bacterium (ex Bugula neritina AB1) TaxID=1868282 RepID=A0A1E4ZYK2_9GAMM) HSP 1 Score: 244 bits (623), Expect = 5.670e-78 Identity = 114/227 (50.22%), Postives = 150/227 (66.08%), Query Frame = 1
Query: 4 LLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSHRLGEF-SHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGH 681
L+EA P +RP+ + H+ GV A E + +P +LD++E +IG DI+LW +FCKPA G+EVPWHQDGQYWPIRP AT TVWIA+DD V NGC+RV+PGSH + SH +RE L L + + E ++EL AGQ+SLHDV LVHGS NTS RRAG AIRYMP++S ++R L V+F +RP+WL+RG+D G+NDF++GH
Sbjct: 38 LIEANPGVRPEQLVNAHLASPSAEGVRGAAELLELAKEPEILDLVEDVIGQDIILWGCQLFCKPAGDGMEVPWHQDGQYWPIRPLATCTVWIAIDDSLVSNGCLRVVPGSHSDQQLHSHYTDDRERLTLTQAIEPQHLDEEAFADVELRAGQMSLHDVYLVHGSNVNTSVNRRAGLAIRYMPASSEFNRDLIEPSDKSGYKVDFSRRPLWLLRGQDSSGKNDFSIGH 264
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: A0A2D4RVH4_9DELT (Phytanoyl-CoA dioxygenase n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A2D4RVH4_9DELT) HSP 1 Score: 245 bits (625), Expect = 5.870e-78 Identity = 118/227 (51.98%), Postives = 150/227 (66.08%), Query Frame = 1
Query: 1 RLLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSHRLGEFSHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGH 681
R+L A P +RP+ + H+ GV F + DP ++D +EQ+IG +I+LW +FCKP + G+EVP HQDG YWPIRP AT TVW+ALD V +NGCMRV+P SHR SH+ REDLVLN +ND RI E ++EL GQ S+HDV LVHGS N SG+RRAG AIRYMPSTSL++R L G V F +RP+WL+RGE++ G +D VGH
Sbjct: 62 RVLVANPEVRPEKLVSVHISGLNQEGVRGDDAFMELAKDPLIVDCVEQLIGQNIILWGCQLFCKPGSDGMEVPMHQDGAYWPIRPLATCTVWVALDHVTEENGCMRVVPXSHRHQSLSHQKESREDLVLNQRVNDGRIDPENTVSLELAPGQFSMHDVHLVHGSHPNRSGKRRAGLAIRYMPSTSLFNRDLIDTGTGSGYLVNFAKRPLWLIRGENKAG-SDLKVGH 287
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: A0A4Q5PBM4_9BURK (Phytanoyl-CoA dioxygenase family protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5PBM4_9BURK) HSP 1 Score: 243 bits (621), Expect = 1.210e-77 Identity = 111/229 (48.47%), Postives = 150/229 (65.50%), Query Frame = 1
Query: 4 LLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSH---RLGEFSHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGH 681
L+ P +RP+ + H+ + GV ++FFD + ++D++ Q+IGPD++LW VFCKPA+ G E PWHQDG YWPIRP A TVW+AL+ NGC+RVIPGSH +L E HE +R DL LN + D QA ++EL+ GQ+S+HD+ ++HG++ANTSG RR G A+RYMP TSL+DR+L V F RP+WL+RGED+ G NDF VGH
Sbjct: 39 LIANNPGVRPEKLVSAHIEGQNDEGVKGVKDFFDLAMNDDIIDLVSQVIGPDVILWGCHVFCKPASEGYETPWHQDGHYWPIRPLANCTVWVALEPSTTANGCLRVIPGSHAGKQLHEHLHE--DRPDLTLNQRMADGTFDEAQAVDLELQPGQMSMHDIYMIHGAEANTSGIRRTGVALRYMPGTSLFDRNLKPSDGKTGVSVAFATRPLWLLRGEDKTGMNDFKVGH 265
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Match: A0A2M6VJY7_9BURK (Phytanoyl-CoA dioxygenase n=3 Tax=unclassified Limnohabitans TaxID=2626134 RepID=A0A2M6VJY7_9BURK) HSP 1 Score: 243 bits (621), Expect = 1.300e-77 Identity = 113/229 (49.34%), Postives = 153/229 (66.81%), Query Frame = 1
Query: 4 LLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIGPDIVLWASAVFCKPATTGLEVPWHQDGQYWPIRPRATVTVWIALDDVCVDNGCMRVIPGSHR---LGEFSHEVSEREDLVLNNVLNDARICLEQARNIELEAGQVSLHDVELVHGSQANTSGRRRAGYAIRYMPSTSLYDRSLAMGGASQSAPVEFKQRPIWLVRGEDRCGQNDFTVGH 681
L+ P +RP+ + H+ GV ++ F + ++D++EQ+IGPDI+LW VFCKPA+ G E PWHQDG YWPIRP AT TVW+AL+ +NGC+RV+PGSHR L E HE +R+DLVLN + + QA ++EL+ GQ+S+HDV ++HG++ANTS +RR G A+R+MP TSL+DR L PV F RP+WL+RGEDR G+NDF VGH
Sbjct: 40 LIANNPGVRPEKLVSAHIEGRNDEGVHGSQRFLELAMHKPIVDLVEQLIGPDIILWGCHVFCKPASEGFETPWHQDGHYWPIRPLATCTVWVALEPSTRENGCLRVVPGSHRDHVLHEHLHE--DRQDLVLNQRMAEGTFDEAQAVDLELQPGQMSMHDVYMIHGAKANTSTQRRTGVALRFMPGTSLFDRDLRPMDGKTGVPVSFGTRPLWLLRGEDRTGRNDFQVGH 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14043.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14043.2.1 >prot_P-wetherbeei_contig14043.2.1 ID=prot_P-wetherbeei_contig14043.2.1|Name=mRNA_P-wetherbeei_contig14043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=231bp RLLEARPALRPDFIALPHVPWEGPGGVDIAREFFDYVSDPGLLDVIEQIIback to top mRNA from alignment at P-wetherbeei_contig14043:1066..1758- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14043.2.1 ID=mRNA_P-wetherbeei_contig14043.2.1|Name=mRNA_P-wetherbeei_contig14043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig14043:1066..1758- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14043:1066..1758- >mRNA_P-wetherbeei_contig14043.2.1 ID=mRNA_P-wetherbeei_contig14043.2.1|Name=mRNA_P-wetherbeei_contig14043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig14043:1066..1758- (Phaeothamnion wetherbeei SAG_119_79)back to top |