mRNA_P-wetherbeei_contig14015.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: A0A835YU16_9STRA (DEAD box RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU16_9STRA) HSP 1 Score: 326 bits (836), Expect = 5.210e-104 Identity = 163/219 (74.43%), Postives = 185/219 (84.47%), Query Frame = 1
Query: 1 QGALSLGGVGYVVLDEADRMLDLGFENDVREIVSWTSASRQTAMFSATWPREIRELAAEFLKMPVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFFHAGDKVR 657
+GA+ L GV Y+VLDEADRMLDLGFE DVR+I+ T+ +RQTAMFSATWPREIR LAAEFL+ PVRVTVGDD+LTAN RV+Q VEV+GERERD RLL LL ++HG+R NRVLVFALYK+EA RLE L+R G+ AVAVHGDK Q +RERAL FR S PLMIATDVAARGLDIPDVE V+NYSFPL + YIHR+GRTGRAGKTG S+TFFH GDK R
Sbjct: 343 EGAVDLSGVVYMVLDEADRMLDLGFEQDVRDIIGATARARQTAMFSATWPREIRALAAEFLREPVRVTVGDDDLTANARVAQHVEVIGERERDARLLELLEKVHGARDNRVLVFALYKKEAARLEALLSRRGYSAVAVHGDKGQADRERALAAFRSKSVPLMIATDVAARGLDIPDVEFVINYSFPLETSSYIHRIGRTGRAGKTGVSYTFFHQGDKAR 561
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: D8LEE8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE8_ECTSI) HSP 1 Score: 306 bits (785), Expect = 4.470e-97 Identity = 158/221 (71.49%), Postives = 179/221 (81.00%), Query Frame = 1
Query: 1 QGALSLGGVGYVVLDEADRMLDLGFENDVREIVSWTS--ASRQTAMFSATWPREIRELAAEFLKMPVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFFHAGDKVR 657
+GA L V +VLDEADRMLDLGFE DVR+I+ + + + RQTAMFSATWP+ IR+LAAEFL PV+VTVG D+LTAN RV Q VEVV ERERDG+LL LL H SR NRVLVFALYKREA RLEQ L RN + AVAVHGDK Q +RERALG+F+ PLM+ATDVAARGLDIPDVE+V+NYSFPLTI DYIHR+GRTGRAGK G SHT+FH GDK R
Sbjct: 306 EGACDLSKVTSLVLDEADRMLDLGFEQDVRDIIGYCAGPSKRQTAMFSATWPKSIRDLAAEFLADPVKVTVGADDLTANYRVEQHVEVVEERERDGKLLRLLATCHKSRKNRVLVFALYKREAARLEQFLQRNNFDAVAVHGDKGQADRERALGQFKSKERPLMVATDVAARGLDIPDVEYVINYSFPLTIEDYIHRIGRTGRAGKKGVSHTYFHQGDKAR 526
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: A0A7S2V5P3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P3_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.120e-90 Identity = 146/223 (65.47%), Postives = 177/223 (79.37%), Query Frame = 1
Query: 1 QGALSLGGVGYVVLDEADRMLDLGFENDVREIVSWT-SASRQTAMFSATWPREIRELAAEFLKM---PVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFFHAGDKVR 657
+G+LSLG VGY+VLDEADRMLDLGFE D+R I+ T +A+RQTAMFSATWP E+R+LA+EFL+ V+V VG ++L++N V Q V+VV ER+RDG L LL + H TNRVLVFALYK+EA RLE + R GWK A+HGDKSQ +RE AL FR PL++ATDVAARGLDIPDVE+V+NYSFPLTI DY+HR+GRTGRAG+ G +HTFFHAGDK R
Sbjct: 161 EGSLSLGQVGYLVLDEADRMLDLGFEEDMRAIIGATPAATRQTAMFSATWPLEVRKLASEFLRGGEGTVKVVVGGEKLSSNKNVHQIVDVVEERQRDGLLRNLLTKYHPEGTNRVLVFALYKKEAARLEAMIQRAGWKVGAIHGDKSQRDREAALADFRACRVPLLVATDVAARGLDIPDVEYVINYSFPLTIEDYVHRIGRTGRAGQKGVAHTFFHAGDKAR 383
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: A0A7S2FZJ9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FZJ9_9EUKA) HSP 1 Score: 280 bits (716), Expect = 8.150e-89 Identity = 137/220 (62.27%), Postives = 171/220 (77.73%), Query Frame = 1
Query: 1 QGALSLGGVGYVVLDEADRMLDLGFENDVREIVSWTSASRQTAMFSATWPREIRELAAEFLKMPVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFFHAGDKVRK 660
+GA+SL G Y+VLDEADRMLD+GFE DVR I+S TS +R+TAMF+ATWP +R LAAEFL PVRV VG ++L+AN+RV+QTVEV+ E + RL LL + H SR NRVLVF LYK+EA R+EQ + R G+ A+ +HGD +Q R +AL +F++GS PL++ATDVAARGLDIPDVE V+NY+FPLTI DYIHR+GRTGR GKTG SHT F + K
Sbjct: 138 EGAVSLSGTTYLVLDEADRMLDMGFEKDVRSIISSTSKARRTAMFTATWPDSVRTLAAEFLTSPVRVNVGSEDLSANIRVTQTVEVLDEARKPSRLPQLLQKYHSSRKNRVLVFCLYKKEAARVEQDIQRAGYSAIGIHGDMTQAARTQALQQFKEGSVPLLVATDVAARGLDIPDVEVVINYTFPLTIEDYIHRIGRTGRGGKTGISHTLFTGNPQFEK 357
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: A0A7S1UCS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCS2_9STRA) HSP 1 Score: 276 bits (705), Expect = 8.260e-89 Identity = 138/216 (63.89%), Postives = 172/216 (79.63%), Query Frame = 1
Query: 10 LSLGGVGYVVLDEADRMLDLGFENDVREIVS--WTSASRQTAMFSATWPREIRELAAEFLKMPVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFFHAGDK 651
L+LG V Y+VLDEADRMLD+GFE DV+ I++ +RQT MFSATWP+ IRELA+ FL P++++VG D+LT+N RV QTVEV+GE +R+ RL LL + H R NRVLVFALYK+EA RLE+ L R+ ++ +VHGDK Q ER RA+ +FR +CPL++ATDVAARGLDIPDVE V+NYSFPLTI DYIHR+GRTGRAGK+G SHT FH G+K
Sbjct: 20 LTLGAVEYLVLDEADRMLDMGFERDVKAIIANCMPPPARQTVMFSATWPQSIRELASTFLNSPIKISVGSDDLTSNHRVKQTVEVIGEFDREQRLRELLKKYHKGRNNRVLVFALYKKEAARLERMLQRD-FRCSSVHGDKPQTERSRAVDEFRANTCPLLVATDVAARGLDIPDVEVVINYSFPLTIEDYIHRIGRTGRAGKSGISHTLFHDGNK 234
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: A0A7S3XUU1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUU1_HETAK) HSP 1 Score: 282 bits (721), Expect = 1.230e-87 Identity = 146/225 (64.89%), Postives = 166/225 (73.78%), Query Frame = 1
Query: 1 QGALSLGGVGYVVLDEADRMLDLGFENDVREIVSWTSA------SRQTAMFSATWPREIRELAAEFLKMPVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFFHAGDKVR 657
+ A+ LG V ++VLDEADRMLDLGFE D+R I+ A R+TAMFSATWPRE+RELAAEFL PVRVT+G +L AN RVSQ VEV+GERER RL LL H R NRV+VF LYK+E RLE L R GWK A+HGDK Q RE AL FR P++IATDVAARGLDIPDVE V+NYSFPLTI DY+HR+GRTGRAGK+G SHT FH GDK R
Sbjct: 292 ENAVDLGRVAHLVLDEADRMLDLGFEQDMRAIIGACPAPGAAAGGRRTAMFSATWPREVRELAAEFLDRPVRVTIGGSKLAANARVSQCVEVMGERERGARLQQLLERYHDGR-NRVIVFGLYKKECSRLEGDLRRAGWKVGAIHGDKGQGAREAALEDFRQQKVPILIATDVAARGLDIPDVEVVINYSFPLTIEDYVHRIGRTGRAGKSGVSHTLFHEGDKAR 515
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: H3G5S8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5S8_PHYRM) HSP 1 Score: 275 bits (702), Expect = 1.280e-86 Identity = 131/215 (60.93%), Postives = 166/215 (77.21%), Query Frame = 1
Query: 13 SLGGVGYVVLDEADRMLDLGFENDVREIVSWTSASRQTAMFSATWPREIRELAAEFLKMPVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFFHAGDKVR 657
+L V +VVLDEADRMLD GFE D+R I+ T RQ AMFSATWP+ I++LA EFL PV+VT+G DEL A+V V+Q VEV+ +R RD R ALL + H SR NR+L+F LYK+EA+R+E+ L + GW +A+HGD+SQ +R A+ +F+ G PL+IATDVAARGLDIP VE+V+NYSFPLTI DY+HR+GRTGR GK G++HTFF A DK R
Sbjct: 148 NLSKVTFVVLDEADRMLDEGFEKDIRSIIGSTHPERQIAMFSATWPQSIQKLAHEFLNNPVKVTIGSDELAASVNVTQIVEVIDDRARDARAHALLQKYHSSRKNRILLFVLYKKEADRVERMLHQRGWNCIAIHGDRSQQQRSEAVEQFKSGEVPLLIATDVAARGLDIPGVEYVINYSFPLTIEDYVHRIGRTGRGGKKGTAHTFFTANDKPR 362
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: A0A1D6HXH9_MAIZE (DEAD-box ATP-dependent RNA helicase 5 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6HXH9_MAIZE) HSP 1 Score: 269 bits (687), Expect = 3.050e-86 Identity = 133/218 (61.01%), Postives = 167/218 (76.61%), Query Frame = 1
Query: 4 GALSLGGVGYVVLDEADRMLDLGFENDVREIVSWTSASRQTAMFSATWPREIRELAAEFLKM-PVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFFHAGDKV 654
G L V +VVLDEADRMLDLGFE +VR I+S TS+ RQ MFSATWP + +LA EF+ P++V +G ++L AN V Q VEV+ +R RD RLLALL + H +++NRVLVF LYK+EA R+E L R GWKAV+VHGDK+Q++R +AL F++G CPLMIATDVA+RGLDIPDVE V+NYS+PLT DY+HR+GRTGRAGK G +HTFF +K
Sbjct: 8 GVCCLNEVSFVVLDEADRMLDLGFEPEVRAILSQTSSVRQMVMFSATWPLAVHKLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRTRDSRLLALLDKYHQAQSNRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDKAQHDRTKALSLFKEGKCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQANKA 225
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: A0A7R9U8F6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8F6_9STRA) HSP 1 Score: 276 bits (707), Expect = 7.570e-86 Identity = 144/218 (66.06%), Postives = 166/218 (76.15%), Query Frame = 1
Query: 4 GALSLGGVGYVVLDEADRMLDLGFENDVREIVS--WTSASRQTAMFSATWPREIRELAAEFLKMPVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFFHAGDK 651
G L L V Y+VLDEADRMLDLGFE DV+ I++ RQT MFSATWP IR+LAA FL PV++TVG DELT+N RV QTVEV+ ER+R RL LL H + NR+LVFALYK+EA RLE L R ++ +VHGDKSQ ER RA+ FR+ CPL+IATDVAARGLDIPDVE V+NYSFPLTI DYIHR+GRTGRAGKTG SHTFFH G+K
Sbjct: 275 GGLVLDAVEYLVLDEADRMLDLGFERDVKAIIANCMPPPERQTVMFSATWPESIRQLAATFLNNPVKITVGTDELTSNHRVQQTVEVIAERDRFQRLRELLNRYHRKKNNRILVFALYKKEAARLESMLQRE-FRCNSVHGDKSQPERSRAVDDFRNKDCPLLIATDVAARGLDIPDVEVVINYSFPLTIEDYIHRIGRTGRAGKTGVSHTFFHDGNK 491
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Match: A0A2P6U3S5_CHLSO (DEAD-box ATP-dependent RNA helicase 5 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3S5_CHLSO) HSP 1 Score: 278 bits (710), Expect = 7.970e-86 Identity = 140/219 (63.93%), Postives = 168/219 (76.71%), Query Frame = 1
Query: 4 GALSLGGVGYVVLDEADRMLDLGFENDVREIVSWTSASRQTAMFSATWPREIRELAAEFLKMPVRVTVGDDELTANVRVSQTVEVVGERERDGRLLALLPEIHGSRTNRVLVFALYKREAERLEQTLARNGWKAVAVHGDKSQNERERALGKFRDGSCPLMIATDVAARGLDIPDVEHVVNYSFPLTIADYIHRVGRTGRAGKTGSSHTFF-HAGDKVR 657
GA L V ++VLDEADRMLDLGFE +R I T A RQT MFSATWP +R+LAA+FL PV+VT+G +L A+ V+Q VEV+ +R RDGRL LL H SRTNRV++F LYK+EA R+EQTL R GWKAVA+HGD SQ +R A+ KF+ G PL++ATDVAARGLDIPDVE V+NYSFPLT DY+HR+GRTGRAGKTG++HTFF A DK R
Sbjct: 314 GACKLDEVSFLVLDEADRMLDLGFEPHIRAIAGKTRADRQTLMFSATWPTTVRKLAADFLCHPVKVTIGSQDLAASHSVTQVVEVIEDRARDGRLHDLLQRYHSSRTNRVIIFVLYKKEAVRVEQTLQRKGWKAVAIHGDISQVQRTAAVDKFKSGQVPLLVATDVAARGLDIPDVEVVLNYSFPLTTEDYVHRIGRTGRAGKTGTAHTFFVGANDKPR 532 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14015.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14015.1.1 >prot_P-wetherbeei_contig14015.1.1 ID=prot_P-wetherbeei_contig14015.1.1|Name=mRNA_P-wetherbeei_contig14015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp MLDLGFENDVREIVSWTSASRQTAMFSATWPREIRELAAEFLKMPVRVTVback to top mRNA from alignment at P-wetherbeei_contig14015:142..1361- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14015.1.1 ID=mRNA_P-wetherbeei_contig14015.1.1|Name=mRNA_P-wetherbeei_contig14015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1220bp|location=Sequence derived from alignment at P-wetherbeei_contig14015:142..1361- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14015:142..1361- >mRNA_P-wetherbeei_contig14015.1.1 ID=mRNA_P-wetherbeei_contig14015.1.1|Name=mRNA_P-wetherbeei_contig14015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig14015:142..1361- (Phaeothamnion wetherbeei SAG_119_79)back to top |