mRNA_P-wetherbeei_contig1400.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: A0A329SW12_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SW12_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 5.730e-21 Identity = 49/118 (41.53%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATL----GLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
VTI+T G GD+ P S +A+VF++FYLP+A + G+G +L+E LSA R + ++ L+MD++ DG+V +LEYLC +LV K ++ DID I+ +F LD + +G L R ++
Sbjct: 273 VTITTVGFGDLSPKSQSARVFAIFYLPLAVVTVAHGIGSILNE-LSA---RSVMKTKISMKELLDMDADGDGKVSQLEYLCYMLVKLNKADQDDIDGIIAQFHKLDRDGSGELDRDDL 386
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: H3GTB3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTB3_PHYRM) HSP 1 Score: 96.3 bits (238), Expect = 8.890e-21 Identity = 48/118 (40.68%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATL----GLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
+TI+T G GD+ P S A+VF++FYLP+A + G+G +L+E LSA R + ++ L+MD++ DG+V ++EYLC +LV K ++ DID I+T+F LD + +G L R ++
Sbjct: 915 ITITTVGFGDLSPKSQGARVFAIFYLPLAVVTVAHGIGSILNE-LSA---RSVMKTKISMKELLDMDADGDGKVSQMEYLCYMLVKLNKADQDDIDGIITQFHKLDRDGSGELDRDDL 1028
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: A0A662XUN9_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUN9_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.210e-20 Identity = 48/118 (40.68%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATL----GLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
+TI+T G GD+ P S AA++F++FYLP+A + G+G +L+E LSA R + ++ L MD++ DG+V +LEY+C +LV K ++ DID I+T+F LD + +G L R ++
Sbjct: 913 ITITTVGFGDLSPKSEAARIFAIFYLPLAVVTVAHGIGSILNE-LSA---RSVMKTKISMKELLAMDTDGDGKVSQLEYMCYMLVKLNKADQDDIDGIITQFHKLDRDGSGELDRDDL 1026
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: G4ZLG8_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4ZLG8_PHYSP) HSP 1 Score: 94.4 bits (233), Expect = 4.210e-20 Identity = 46/118 (38.98%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATL----GLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
+TI+T G GD+ P S +A+++++FYLP+A + G+G +L+E LSA R + ++ L+MD++ DG+V +LEYLC +LV K ++ DID I+ +F LD + +G L R ++
Sbjct: 956 ITITTVGFGDLSPTSKSARIYAIFYLPLAVVTVAHGIGSILNE-LSA---RSVMKTKISMKELLDMDADGDGKVSQLEYLCYMLVKLNKADQDDIDGIIAQFHKLDRDGSGELDRDDL 1069
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: A0A5D6XXA4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXA4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 4.830e-20 Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATL----GLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
+TI+T G GD P S AA++F++FYLP+A + G+G + EF +R + ++ L MDS+ DG+V KLEYL +LV K ++ DID IL +F+ LD + +G L ++++
Sbjct: 254 ITITTVGFGDRSPTSEAARIFAIFYLPLAVVSVAHGIGSIAEEF----SRRSVMKSKISMKELLEMDSDGDGKVSKLEYLSYMLVKLSKADQDDIDGILAQFNKLDRDGSGELDKADL 367
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: A0A662WXW0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WXW0_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 5.870e-20 Identity = 47/118 (39.83%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATL----GLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
+TI+T G GD+ P S AA++F++FYLP+A + G+G +L+E LSA R + ++ L MD++ DG+V +LEY+C +LV K ++ DID I+ +F LD + +G L R ++
Sbjct: 1619 ITITTVGFGDLSPKSEAARIFAIFYLPLAVVTVAHGIGSILNE-LSA---RSVMKTKISMKELLAMDTDGDGKVSQLEYMCYMLVKLNKADQDDIDGIIAQFHKLDRDGSGELDRDDL 1732
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: D0N6H5_PHYIT (Voltage-gated Ion Channel (VIC) Superfamily n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0N6H5_PHYIT) HSP 1 Score: 92.4 bits (228), Expect = 6.290e-20 Identity = 46/118 (38.98%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATL----GLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
+TI+T G GD+ P S +A++F++FYLP+A + G+G +++E LSA R + ++ L+MD++ DG+V +LEYLC +LV K ++ DI I+T+F LD + +G L R ++
Sbjct: 215 ITITTVGFGDLSPKSESARIFAIFYLPLAVVTVAHGIGSIVNE-LSA---RSVMKTKISMKELLDMDTDGDGKVSQLEYLCYMLVKLNKVDQDDIGGIITQFHKLDRDGSGELDRDDL 328
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: W2MW69_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MW69_PHYPR) HSP 1 Score: 92.8 bits (229), Expect = 7.580e-20 Identity = 40/114 (35.09%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATLGLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
+TI+T G GD+ P S +A++F++FYLP+A + + + L+ R + ++ L+MD++ DG+V +LEYLC +LV K ++ D+D I+ +F LD + +G L R ++
Sbjct: 271 ITITTIGFGDLSPKSESARIFAIFYLPLAVVTVAHGIGSILNEISARSVMKTKISMKELLDMDADGDGKVSQLEYLCYMLVKLNKVDQDDLDGIIAQFHKLDRDGSGELDRDDL 384
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: A0A6A3XLK5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XLK5_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.030e-19 Identity = 45/118 (38.14%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATL----GLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
+TI+T G GD+ P S +A+++++FYLP+A + G+G +L+E LSA R + ++ L+MD++ DG+V +LEYLC +LV K ++ DID I+ +F LD + +G L ++
Sbjct: 269 ITITTVGFGDLSPTSKSARIYAIFYLPLAVVTVAHGIGSILNE-LSA---RSVMKTKISMKELLDMDADGDGKVSQLEYLCYMLVKLNKADQDDIDGIIAQFHKLDRDGSGELDHDDL 382
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Match: A0A0W8CIM0_PHYNI (Copine-4 n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CIM0_PHYNI) HSP 1 Score: 92.8 bits (229), Expect = 1.460e-19 Identity = 40/114 (35.09%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 1 VTISTTGLGDIEPVSYAAKVFSLFYLPIATLGLGKVLSEFLSAARQRRIFPFRVDTTRFLNMDSNHDGRVDKLEYLCELLVTQGKCEKGDIDAILTKFDILDSNLTGYLTRSEV 342
+TI+T G GD+ P S +A++F++FYLP+A + + + L+ R + ++ L+MD++ DG+V +LEYLC +LV K ++ D+D I+ +F LD + +G L R ++
Sbjct: 1018 ITITTIGFGDLSPKSESARIFAIFYLPLAVVTVAHGIGSILNEISARSVMKTKISMKELLDMDADGDGKVSQLEYLCYMLVKLNKVDQDDLDGIIAQFHKLDRDGSGELDRDDL 1131 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1400.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1400.1.1 >prot_P-wetherbeei_contig1400.1.1 ID=prot_P-wetherbeei_contig1400.1.1|Name=mRNA_P-wetherbeei_contig1400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp VTISTTGLGDIEPVSYAAKVFSLFYLPIATLGLGKVLSEFLSAARQRRIFback to top mRNA from alignment at P-wetherbeei_contig1400:230..1216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1400.1.1 ID=mRNA_P-wetherbeei_contig1400.1.1|Name=mRNA_P-wetherbeei_contig1400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig1400:230..1216- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1400:230..1216- >mRNA_P-wetherbeei_contig1400.1.1 ID=mRNA_P-wetherbeei_contig1400.1.1|Name=mRNA_P-wetherbeei_contig1400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig1400:230..1216- (Phaeothamnion wetherbeei SAG_119_79)back to top |