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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 2423 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | Bromodomain |
| Ec32 ortholog | Ec-04_002830.2 |
| Cds size | 2421 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186004.8611877-CDS-P-wetherbeei_contig140:7880..9809 | 1683186004.8611877-CDS-P-wetherbeei_contig140:7880..9809 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig140 7881..9809 - |
| 1683186004.8719733-CDS-P-wetherbeei_contig140:10156..10648 | 1683186004.8719733-CDS-P-wetherbeei_contig140:10156..10648 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig140 10157..10648 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig140.4.1 >prot_P-wetherbeei_contig140.4.1 ID=prot_P-wetherbeei_contig140.4.1|Name=mRNA_P-wetherbeei_contig140.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=807bp
KEEELLSNLHDYLSRHDVPKAAARGWKVRWSSHSGGKSDFQYVGPGGEKF
GSRKEVRKFLLTPSREECFRRARKALQREREALAAAAEDARKGRGGGDSG
VDLFAEGFLVGPKSGGGGGGGADGDLPWPVRHGEVRVLSLGHVEADPAFH
DEENIWAPGFCCLKAALNCKEHSKGRPVVLRCSIRRSGGNGDGGGGDNDT
GPIFRIEIAEPPPRDDEMQSGRPEIMAAFDCATEAKAWKKALRALGLNEL
EPEDLQAALPGGACFAAAPVQRLVEGMEGTLDCRDYRFQEQRGDRGLAAE
LDRWERDDRPPPTLLRQLERLIENWRNSMTKERREATGAKKSRRSELEGK
AVAAAAAAAAAAASSSAAKEVDKSDGGGGGGPGGGASGGGGSSPGGTSGG
GASGPKRSGGDAKGRGKGRKVAAAEESAGDSDDGDDADDGRGGGGGRVKS
RGKAKDGAEEKKGKTAALGQKKRAAKSKQEDEGFDSDEKPAKKPGRPAKK
GGAAATATITGRGKKGRGVGGKRKRSDDSEEGEEDDDDISDDNATGDGGD
ATSAAGRSSRAPPSASGKKGAAGKKGAAAGRKGRARGSVYGDGNGDARVT
KAKQKKTSAANGEELQKKASKKAADGAGDGEGGGGGGGRGRSGGGAKRSK
GEHLLADTSHDIEAQVKARRREARAAVLARFDRETQGLLDAAEDIADDNA
LEGFDVPPPEPRPASGAAAAAAAEAAAAGVKTGAASTVVGSSSGSGDHPA
ALSGARLEHVMELWNFVHAFAKPLGLRAAPSLEQLRDAILTLSPPDGPAR
DMAAVAP back to topmRNA from alignment at P-wetherbeei_contig140:7879..10648- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig140.4.1 ID=mRNA_P-wetherbeei_contig140.4.1|Name=mRNA_P-wetherbeei_contig140.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2770bp|location=Sequence derived from alignment at P-wetherbeei_contig140:7879..10648- (Phaeothamnion wetherbeei SAG_119_79)
AAAGAGGAAGAGCTGCTGAGCAATCTGCACGATTATCTCTCCCGCCACGA
CGTGCCGAAGGCGGCAGCGCGCGGCTGGAAGGTCCGCTGGTCGTCCCACA
GCGGCGGCAAGTCGGACTTCCAGTACGTCGGGCCCGGCGGCGAGAAGTTT
GGCAGCCGGAAGGAAGTCAGAAAGTTTCTGCTGACTCCGTCGCGCGAAGA
ATGTTTCCGCCGCGCCCGCAAGGCGCTGCAGCGGGAGAGGGAGGCGCTGG
CGGCGGCGGCGGAGGACGCGCGGAAGGGGCGCGGCGGCGGCGACAGCGGC
GTCGACCTCTTCGCGGAGGGCTTCCTGGTGGGCCCCAAGAGCGGCGGTGG
CGGCGGCGGCGGGGCGGATGGGGACTTGCCGTGGCCGGTGCGGCATGGCG
AGGTCCGTGTGCTGTCGCTGGGGCACGTCGAGGCGGATCCGGCCTTCCAC
GACGAGGAGAACATCTGGGCGCCGGGCTTCTGCTGCCTCAAGGTGAGAAA
ATGCGCTGCTGGATGCTGTTCTTACCGTTCTGCAGCCTGAATGGAAGGTC
ATTGAAAGAGTGCCTCATCAGGAGGCTGTAGTGACAAAAAGGAACTGGCT
CCCTCAGTCTCGTCAACGACTTCGCCTGAACTATGCAGCGAATCCCTTGC
CGCCATCTCAAGTTCAGGCACGGTCCTAGCCTTTGCCTTAACCAGGCAGC
GGACTTCAGTTCCACCATCTTACTTCTGACATCATTCTTGCTTTCCGCTG
CGATGGCGTGACTTTCGCTTTTCTCACTCTCTCGCCGCCCCGCTTTACCC
GTTCTCCTAACAATCTCCTCGTCGCCTTCCCACCAAAAGGCGGCACTAAA
CTGCAAGGAACACTCCAAGGGGCGCCCCGTCGTGCTGCGCTGCTCCATCC
GCCGCAGTGGCGGCAATGGCGACGGCGGCGGCGGCGACAACGACACTGGG
CCCATCTTCCGCATCGAGATCGCCGAGCCGCCGCCCCGCGACGACGAGAT
GCAGAGTGGCCGCCCGGAAATTATGGCCGCATTCGACTGCGCCACCGAGG
CCAAGGCCTGGAAGAAGGCCCTGCGGGCGCTCGGCCTGAACGAGCTGGAG
CCGGAGGATTTGCAGGCGGCGCTGCCCGGCGGGGCGTGCTTTGCGGCGGC
GCCGGTGCAGCGGCTGGTCGAGGGGATGGAGGGCACGCTGGACTGCCGGG
ACTACCGCTTCCAGGAGCAGCGCGGTGACCGAGGGCTGGCAGCGGAGCTG
GACCGCTGGGAGCGGGACGACCGGCCGCCGCCGACGCTGCTGAGACAGCT
GGAGCGGCTCATCGAAAACTGGCGCAATAGCATGACCAAGGAGCGGCGGG
AGGCCACCGGCGCCAAGAAGAGCCGGCGGTCGGAGCTGGAGGGGAAGGCA
GTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTCTTCTTCGGCCGC
GAAAGAGGTCGATAAAAGCGACGGGGGCGGCGGCGGCGGCCCTGGCGGCG
GTGCTTCTGGCGGCGGCGGCTCCTCCCCGGGCGGCACTTCAGGCGGCGGG
GCGTCTGGACCCAAGCGGTCCGGAGGCGACGCGAAAGGGCGCGGCAAGGG
CAGGAAGGTCGCGGCGGCGGAGGAGAGCGCCGGTGACAGCGACGACGGCG
ATGACGCCGACGATGGCAGGGGCGGCGGAGGCGGGCGGGTAAAGTCGCGG
GGCAAGGCAAAGGACGGGGCCGAAGAGAAGAAGGGAAAAACAGCTGCTTT
GGGCCAGAAGAAGAGAGCCGCGAAGTCGAAACAGGAAGATGAAGGCTTTG
ACAGCGACGAAAAACCCGCCAAGAAGCCCGGCAGGCCGGCCAAGAAGGGC
GGCGCCGCTGCTACTGCCACCATCACGGGGCGCGGGAAGAAGGGCCGCGG
CGTTGGCGGGAAGCGCAAGCGCAGCGACGACAGTGAAGAGGGAGAGGAGG
ATGACGACGACATCAGCGACGACAACGCCACCGGCGACGGCGGCGACGCC
ACCAGCGCAGCCGGCAGGAGCTCGCGCGCTCCTCCGAGCGCGTCCGGAAA
GAAAGGCGCTGCAGGAAAGAAAGGCGCTGCTGCGGGAAGGAAGGGGCGCG
CCCGTGGCAGCGTCTACGGGGATGGCAACGGCGACGCCCGCGTCACTAAG
GCAAAGCAAAAGAAGACTTCGGCGGCTAACGGCGAGGAGCTTCAGAAAAA
GGCCTCAAAGAAGGCGGCAGACGGCGCCGGCGACGGCGAGGGCGGCGGCG
GTGGCGGCGGGCGCGGGCGCAGTGGCGGCGGCGCCAAGCGCAGCAAAGGG
GAGCACCTGCTGGCAGACACGAGCCATGACATCGAGGCGCAGGTCAAGGC
GCGGCGCCGCGAGGCGCGCGCCGCCGTCCTCGCCCGCTTCGACAGGGAGA
CGCAGGGTCTGCTGGACGCAGCGGAAGACATCGCCGACGACAATGCGCTA
GAAGGCTTCGACGTCCCGCCGCCGGAACCGCGGCCGGCGAGTGGTGCAGC
TGCGGCTGCCGCAGCCGAGGCCGCCGCCGCCGGCGTCAAAACTGGCGCCG
CCAGCACTGTAGTTGGGAGCAGCAGCGGGAGCGGGGATCACCCGGCGGCG
CTCTCCGGGGCGCGGCTGGAGCACGTGATGGAGCTGTGGAACTTCGTGCA
CGCCTTCGCCAAGCCGTTAGGGCTGCGGGCGGCGCCGTCGCTCGAGCAGC
TGCGGGACGCCATCTTGACGCTGTCTCCTCCCGACGGGCCGGCAAGAGAC
ATGGCGGCGGTAGCGCCGGC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig140:7879..10648- >mRNA_P-wetherbeei_contig140.4.1 ID=mRNA_P-wetherbeei_contig140.4.1|Name=mRNA_P-wetherbeei_contig140.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2421bp|location=Sequence derived from alignment at P-wetherbeei_contig140:7879..10648- (Phaeothamnion wetherbeei SAG_119_79)
AAAGAGGAAGAGCTGCTGAGCAATCTGCACGATTATCTCTCCCGCCACGA
CGTGCCGAAGGCGGCAGCGCGCGGCTGGAAGGTCCGCTGGTCGTCCCACA
GCGGCGGCAAGTCGGACTTCCAGTACGTCGGGCCCGGCGGCGAGAAGTTT
GGCAGCCGGAAGGAAGTCAGAAAGTTTCTGCTGACTCCGTCGCGCGAAGA
ATGTTTCCGCCGCGCCCGCAAGGCGCTGCAGCGGGAGAGGGAGGCGCTGG
CGGCGGCGGCGGAGGACGCGCGGAAGGGGCGCGGCGGCGGCGACAGCGGC
GTCGACCTCTTCGCGGAGGGCTTCCTGGTGGGCCCCAAGAGCGGCGGTGG
CGGCGGCGGCGGGGCGGATGGGGACTTGCCGTGGCCGGTGCGGCATGGCG
AGGTCCGTGTGCTGTCGCTGGGGCACGTCGAGGCGGATCCGGCCTTCCAC
GACGAGGAGAACATCTGGGCGCCGGGCTTCTGCTGCCTCAAGGCGGCACT
AAACTGCAAGGAACACTCCAAGGGGCGCCCCGTCGTGCTGCGCTGCTCCA
TCCGCCGCAGTGGCGGCAATGGCGACGGCGGCGGCGGCGACAACGACACT
GGGCCCATCTTCCGCATCGAGATCGCCGAGCCGCCGCCCCGCGACGACGA
GATGCAGAGTGGCCGCCCGGAAATTATGGCCGCATTCGACTGCGCCACCG
AGGCCAAGGCCTGGAAGAAGGCCCTGCGGGCGCTCGGCCTGAACGAGCTG
GAGCCGGAGGATTTGCAGGCGGCGCTGCCCGGCGGGGCGTGCTTTGCGGC
GGCGCCGGTGCAGCGGCTGGTCGAGGGGATGGAGGGCACGCTGGACTGCC
GGGACTACCGCTTCCAGGAGCAGCGCGGTGACCGAGGGCTGGCAGCGGAG
CTGGACCGCTGGGAGCGGGACGACCGGCCGCCGCCGACGCTGCTGAGACA
GCTGGAGCGGCTCATCGAAAACTGGCGCAATAGCATGACCAAGGAGCGGC
GGGAGGCCACCGGCGCCAAGAAGAGCCGGCGGTCGGAGCTGGAGGGGAAG
GCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTCTTCTTCGGC
CGCGAAAGAGGTCGATAAAAGCGACGGGGGCGGCGGCGGCGGCCCTGGCG
GCGGTGCTTCTGGCGGCGGCGGCTCCTCCCCGGGCGGCACTTCAGGCGGC
GGGGCGTCTGGACCCAAGCGGTCCGGAGGCGACGCGAAAGGGCGCGGCAA
GGGCAGGAAGGTCGCGGCGGCGGAGGAGAGCGCCGGTGACAGCGACGACG
GCGATGACGCCGACGATGGCAGGGGCGGCGGAGGCGGGCGGGTAAAGTCG
CGGGGCAAGGCAAAGGACGGGGCCGAAGAGAAGAAGGGAAAAACAGCTGC
TTTGGGCCAGAAGAAGAGAGCCGCGAAGTCGAAACAGGAAGATGAAGGCT
TTGACAGCGACGAAAAACCCGCCAAGAAGCCCGGCAGGCCGGCCAAGAAG
GGCGGCGCCGCTGCTACTGCCACCATCACGGGGCGCGGGAAGAAGGGCCG
CGGCGTTGGCGGGAAGCGCAAGCGCAGCGACGACAGTGAAGAGGGAGAGG
AGGATGACGACGACATCAGCGACGACAACGCCACCGGCGACGGCGGCGAC
GCCACCAGCGCAGCCGGCAGGAGCTCGCGCGCTCCTCCGAGCGCGTCCGG
AAAGAAAGGCGCTGCAGGAAAGAAAGGCGCTGCTGCGGGAAGGAAGGGGC
GCGCCCGTGGCAGCGTCTACGGGGATGGCAACGGCGACGCCCGCGTCACT
AAGGCAAAGCAAAAGAAGACTTCGGCGGCTAACGGCGAGGAGCTTCAGAA
AAAGGCCTCAAAGAAGGCGGCAGACGGCGCCGGCGACGGCGAGGGCGGCG
GCGGTGGCGGCGGGCGCGGGCGCAGTGGCGGCGGCGCCAAGCGCAGCAAA
GGGGAGCACCTGCTGGCAGACACGAGCCATGACATCGAGGCGCAGGTCAA
GGCGCGGCGCCGCGAGGCGCGCGCCGCCGTCCTCGCCCGCTTCGACAGGG
AGACGCAGGGTCTGCTGGACGCAGCGGAAGACATCGCCGACGACAATGCG
CTAGAAGGCTTCGACGTCCCGCCGCCGGAACCGCGGCCGGCGAGTGGTGC
AGCTGCGGCTGCCGCAGCCGAGGCCGCCGCCGCCGGCGTCAAAACTGGCG
CCGCCAGCACTGTAGTTGGGAGCAGCAGCGGGAGCGGGGATCACCCGGCG
GCGCTCTCCGGGGCGCGGCTGGAGCACGTGATGGAGCTGTGGAACTTCGT
GCACGCCTTCGCCAAGCCGTTAGGGCTGCGGGCGGCGCCGTCGCTCGAGC
AGCTGCGGGACGCCATCTTGACGCTGTCTCCTCCCGACGGGCCGGCAAGA
GACATGGCGGCGGTAGCGCCG back to top
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