mRNA_P-wetherbeei_contig13938.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A0A7X8XM27_9BURK (zf-trcl domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XM27_9BURK) HSP 1 Score: 130 bits (326), Expect = 6.980e-36 Identity = 63/117 (53.85%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 7 FADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGMRREMHSAICAECGKETQVPFVPSGARPVYCRDCY 357
+ DRNLTC DC FVFTAGEQEFHA+KGFT+EP+RCP CR ARK GPR SD+ G R+M A+CAECGK+TQVPF P+G+RPVYC DC+
Sbjct: 3 YQDRNLTCADCGAEFVFTAGEQEFHASKGFTSEPRRCPGCRAARKAAQGG----------GPRGGSSDA---------FSGRPARQMFDAVCAECGKDTQVPFQPTGSRPVYCSDCF 100
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A0A0F9HLN9_9ZZZZ (zf-trcl domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9HLN9_9ZZZZ) HSP 1 Score: 126 bits (317), Expect = 1.730e-35 Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 1 VSFADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGMRREMHSAICAECGKETQVPFVPSGARPVYCRDCYSQQ 366
+S+ DR LTC DC Q F F+A +Q++HA KG+TNEPKRC +CR AR+ S+RG D G+ G RREMH A+CA+CGK+TQVPF+P G RPVYC DC+S+Q
Sbjct: 1 MSYQDRTLTCQDCGQSFTFSADDQQYHAEKGYTNEPKRCSSCRQARR------------SERG------DGGYSSY------GSSRREMHPAVCAQCGKDTQVPFLPRGDRPVYCSDCFSKQ 98
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A0A355BKG2_9FIRM (Zinc-binding protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A355BKG2_9FIRM) HSP 1 Score: 125 bits (314), Expect = 4.130e-35 Identity = 62/119 (52.10%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 7 FADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGMR--REMHSAICAECGKETQVPFVPSGARPVYCRDCY 357
++D+ LTC DC + FVFTAGEQEF+A +GF NEP RCP CR ARK GGGMR REMH+ ICAECGKETQVPF PSG RPVYC+DC+
Sbjct: 2 YSDKTLTCRDCGKEFVFTAGEQEFYATRGFQNEPSRCPECRAARKA-----------------------------QNNNGGGMRQPREMHTVICAECGKETQVPFKPSGDRPVYCQDCF 91
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A0A2E5F4F0_9CHLR (Zinc-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E5F4F0_9CHLR) HSP 1 Score: 125 bits (313), Expect = 6.410e-35 Identity = 61/120 (50.83%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 1 VSFADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGMRREMHSAICAECGKETQVPFVPSGARPVYCRDCYS 360
+ + DR L+C+DC QPF+F+A +Q FHA KGFTNEPKRCPACR AR+ ++RG GFG REMH A+CA+CGKET VPF P G RPVYC DC+S
Sbjct: 1 MDYEDRTLSCVDCGQPFIFSADDQAFHAEKGFTNEPKRCPACRQARR------------AERG-------GGFGQGP---------REMHPAVCADCGKETTVPFRPRGDRPVYCSDCFS 92
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A5UU44_ROSS1 (zf-trcl domain-containing protein n=2 Tax=Roseiflexus TaxID=120961 RepID=A5UU44_ROSS1) HSP 1 Score: 125 bits (313), Expect = 1.160e-34 Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 1
Query: 1 VSFADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARK--GGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGMRREMHSAICAECGKETQVPFVPSGARPVYCRDCYSQQ 366
+SFAD+ LTC DC FVFT+GEQEF+A KGFTNEP RCP+CR RK GG +SDR +G + +G G G R+MHS CA CG+E VPFVP G +PVYC DC+ Q
Sbjct: 1 MSFADKTLTCRDCGVDFVFTSGEQEFYAQKGFTNEPTRCPSCRQQRKTSGGGRG------YSDR--NGYGRNDSYGAGRG---GYGGERQMHSTTCASCGREALVPFVPRGDKPVYCSDCFQDQ 113
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A0A2W4LQC7_9CHLR (zf-trcl domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4LQC7_9CHLR) HSP 1 Score: 124 bits (312), Expect = 1.300e-34 Identity = 61/124 (49.19%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 1 VSFADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGM--RREMHSAICAECGKETQVPFVPSGARPVYCRDCYSQQ 366
+SFA++ LTC DC F+FTAGEQEF+A KGFTNEP RCP CR A K GA G +G GGG R+M++ CA CG E QVPFVP G +PVYC DC+ QQ
Sbjct: 1 MSFANKTLTCRDCGTDFIFTAGEQEFYAQKGFTNEPSRCPPCRQAHKAGARN---------------GGGGSYGQRNSFSSGGGYSGERQMYTTTCASCGNEAQVPFVPRGDKPVYCSDCFRQQ 109
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A0A382XVU5_9ZZZZ (zf-trcl domain-containing protein n=15 Tax=root TaxID=1 RepID=A0A382XVU5_9ZZZZ) HSP 1 Score: 124 bits (310), Expect = 2.130e-34 Identity = 59/122 (48.36%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 1 VSFADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGMRREMHSAICAECGKETQVPFVPSGARPVYCRDCYSQQ 366
+S+ DRNLTC++C Q F+F+A +Q +HA KG+TNEPKRC +CR AR+ A SDRGPR EMHS ICAECG + VPF+P G RPVYC DC+S+Q
Sbjct: 1 MSYQDRNLTCVECGQSFIFSADDQSYHAEKGYTNEPKRCASCRDARR--ANRSNDGGFGSDRGPR----------------------EMHSVICAECGNQATVPFLPRGDRPVYCSDCFSRQ 98
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A0A535DUI7_9CHLR (Zinc-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535DUI7_9CHLR) HSP 1 Score: 124 bits (310), Expect = 2.320e-34 Identity = 69/122 (56.56%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 1 VSFADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGMRREMHSAICAECGKETQVPFVPSGARPVYCRDCYSQQ 366
+SF DR LTC DC QPF FTA +Q++H KG+TNEPKRCP+CR R RS XXXXXXX GG RREMH A+CA+CGK+TQVPF PSG RPVYC DC+S+Q
Sbjct: 1 MSFEDRTLTCQDCGQPFTFTADDQQYHREKGYTNEPKRCPSCRQNR------------------RSSNYXXXXXXXXXXXXYGG-RREMHDAVCAQCGKDTQVPFRPSGDRPVYCSDCFSKQ 103
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A0A0S7WMH8_9CHLR (Zinc-binding protein n=2 Tax=unclassified Dehalococcoidia TaxID=1318598 RepID=A0A0S7WMH8_9CHLR) HSP 1 Score: 123 bits (309), Expect = 2.930e-34 Identity = 58/122 (47.54%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 1 VSFADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGMRREMHSAICAECGKETQVPFVPSGARPVYCRDCYSQQ 366
+S+ DR LTC DC Q F F+A +Q +HA KG+TNEPKRCP+CR AR RG R +G G+G R+M+ A+CA+CGK+T+VPF P G RPVYC DC+ QQ
Sbjct: 1 MSYEDRTLTCQDCGQSFTFSADDQAYHAEKGYTNEPKRCPSCRQAR---------------RGERDYGGGGGYGRSP---------RQMYPAVCAQCGKQTEVPFQPRGDRPVYCSDCFRQQ 98
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Match: A0A381STD3_9ZZZZ (zf-trcl domain-containing protein n=20 Tax=root TaxID=1 RepID=A0A381STD3_9ZZZZ) HSP 1 Score: 123 bits (309), Expect = 3.110e-34 Identity = 58/122 (47.54%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 1 VSFADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAXXXXXXXXFSDRGPRSFGSDSGFGXXXXXXXGGGMRREMHSAICAECGKETQVPFVPSGARPVYCRDCYSQQ 366
+S+ DRNLTC++C Q F+F+A +Q +HA KG+TNEPKRCP+CR +R+ ++R FG D G REMH+ ICAECG E VPF P G RPVYC DC+S+Q
Sbjct: 1 MSYQDRNLTCVECGQSFIFSADDQSYHAEKGYTNEPKRCPSCRQSRR------------ANRSSDGFGFDRG-------------PREMHTVICAECGNEATVPFRPRGDRPVYCSDCFSRQ 97 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13938.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13938.2.1 >prot_P-wetherbeei_contig13938.2.1 ID=prot_P-wetherbeei_contig13938.2.1|Name=mRNA_P-wetherbeei_contig13938.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp VSFADRNLTCIDCKQPFVFTAGEQEFHAAKGFTNEPKRCPACRTARKGGAback to top mRNA from alignment at P-wetherbeei_contig13938:985..1350- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13938.2.1 ID=mRNA_P-wetherbeei_contig13938.2.1|Name=mRNA_P-wetherbeei_contig13938.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig13938:985..1350- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13938:985..1350- >mRNA_P-wetherbeei_contig13938.2.1 ID=mRNA_P-wetherbeei_contig13938.2.1|Name=mRNA_P-wetherbeei_contig13938.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig13938:985..1350- (Phaeothamnion wetherbeei SAG_119_79)back to top |