mRNA_P-wetherbeei_contig13922.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13922.1.1
Unique NamemRNA_P-wetherbeei_contig13922.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: D8LIF0_ECTSI (NAD(+) kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIF0_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 6.550e-53
Identity = 89/121 (73.55%), Postives = 104/121 (85.95%), Query Frame = 1
Query:    1 QRSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGGVNVSLRMRLSTRQVVRGLRQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVRC 363
            +RSVPPHLCFNLGSMGFL+PFEY   + E+RR+M GG+ VSLRMRLS R ++R  +  E   FHALNE+VIDRGSSPYL+N+EC+CD+ HLT+VQADGLIIATPTGSTAYSMSAGGSMV C
Sbjct:  339 RRSVPPHLCFNLGSMGFLSPFEYESMKEEVRRIMSGGMKVSLRMRLSAR-IIRDDQTSE--AFHALNEIVIDRGSSPYLTNLECYCDEEHLTTVQADGLIIATPTGSTAYSMSAGGSMVNC 456          
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: A0A7S0BNN1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNN1_9RHOD)

HSP 1 Score: 148 bits (373), Expect = 1.310e-41
Identity = 74/122 (60.66%), Postives = 98/122 (80.33%), Query Frame = 1
Query:    1 QRSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGGVNVSLRMRLSTRQVVRGL--RQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVR 360
            + +VPP + FNLGS+GFLTPF++A F  E++ V+ G   +SLRMRL+ R + RG   + ++ R F  LNEVVIDRGSSPYLSN++CFCD+ ++T+VQADG+I++TPTGSTAYSMSAGGSMV 
Sbjct:   60 KTAVPPLISFNLGSLGFLTPFDFANFADEMQYVLEGSCLMSLRMRLNGR-ITRGKGNKSMKDREFQVLNEVVIDRGSSPYLSNLDCFCDEKYITTVQADGIIMSTPTGSTAYSMSAGGSMVH 180          
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: R7QCX7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCX7_CHOCR)

HSP 1 Score: 149 bits (376), Expect = 1.750e-39
Identity = 76/120 (63.33%), Postives = 96/120 (80.00%), Query Frame = 1
Query:    1 QRSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGGVNVSLRMRLSTRQVVRGLRQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVR 360
            +++VPP + FNLGS+GFLTPF+Y  FRTE+  VM G  N+SLRMRL+ R +VRG    +   F  LNEVV+DRGSSPYL N++CFCD  ++T+VQADG+I++TPTGSTAYSMSAGGSMV 
Sbjct:  485 KQAVPPVISFNLGSLGFLTPFQYDHFRTEVEDVMKGNCNLSLRMRLTCR-IVRGDEIRKE--FEVLNEVVVDRGSSPYLCNLDCFCDGKYITTVQADGIIMSTPTGSTAYSMSAGGSMVH 601          
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: A0A2V3J0X2_9FLOR (NAD kinase 2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0X2_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 6.110e-39
Identity = 72/120 (60.00%), Postives = 95/120 (79.17%), Query Frame = 1
Query:    1 QRSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGGVNVSLRMRLSTRQVVRGLRQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVR 360
            + +VPP + FNLGS+GFLTPF++  FRTE+  V+ G  N+SLRMRL+   + +G  + E   F  LNEVV+DRG+SPYLSN++CFCD  ++T+VQADG+I++TPTGSTAYSMSAGGSMV 
Sbjct:  463 RTAVPPVISFNLGSLGFLTPFQFEDFRTEIAEVLKGNCNLSLRMRLTCGIIRQGYVEHE---FQVLNEVVVDRGASPYLSNLDCFCDGKYITTVQADGIIMSTPTGSTAYSMSAGGSMVH 579          
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: A0A6T6C9C9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6C9C9_9RHOD)

HSP 1 Score: 140 bits (354), Expect = 3.830e-37
Identity = 70/120 (58.33%), Postives = 92/120 (76.67%), Query Frame = 1
Query:    1 QRSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGGVNVSLRMRLSTRQVVRGLRQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVR 360
             ++ PP + FNLG++GFLTPF+YA F+ E+  V+ G   V+LRMRL  R +       +   F ALNEVV+DRGSSPYLSN++C+CDD ++T+VQADG+I++TPTGSTAYSMSAGGSMV 
Sbjct:  348 SKACPPVISFNLGTLGFLTPFDYADFQREIDDVVNGNCLVNLRMRLLCRIIHEDGSLSQD--FQALNEVVVDRGSSPYLSNLDCYCDDKYITTVQADGIIMSTPTGSTAYSMSAGGSMVH 465          
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: A0A7S4DFR2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFR2_HETAK)

HSP 1 Score: 140 bits (353), Expect = 5.600e-37
Identity = 74/119 (62.18%), Postives = 89/119 (74.79%), Query Frame = 1
Query:    4 RSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGGVNVSLRMRLSTRQVVRGLRQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVR 360
             + PP LCFN+GS+GFLTPF Y  F+ E+  +M G V +SLRMRL       G    +   ++ LNEVVIDRGSSPYLSNIE FCD+ HLT+VQADG+IIATPTGSTAYSMSAGGS++ 
Sbjct:  286 EAAPPVLCFNMGSLGFLTPFSYQDFKFEVDTLMLGHVMLSLRMRLQCAIHRAGAVVAQ---YNVLNEVVIDRGSSPYLSNIEAFCDNLHLTTVQADGIIIATPTGSTAYSMSAGGSIMH 401          
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: A0A5J4YX33_PORPP (NAD kinase 2, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX33_PORPP)

HSP 1 Score: 137 bits (344), Expect = 4.700e-35
Identity = 69/120 (57.50%), Postives = 89/120 (74.17%), Query Frame = 1
Query:    4 RSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGGVNVSLRMRLSTRQVVRGLRQLEP-RVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVR 360
             +VPP +CFN GS+GFLTPF Y  F  E+  V+ G + +SLRMRL          + +P R FH LNE+V+DRG+S YLS ++CFCDD ++T+VQADG+I++TPTGSTAYSMSAGGSMV 
Sbjct:  568 NAVPPVICFNFGSLGFLTPFVYEDFDKEIESVIEGNLLMSLRMRLHCTV----FSEAKPDREFHVLNELVVDRGASSYLSYLDCFCDDKYITTVQADGIIVSTPTGSTAYSMSAGGSMVH 683          
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: M2Y8C7_GALSU (NAD+ kinase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y8C7_GALSU)

HSP 1 Score: 135 bits (341), Expect = 1.110e-34
Identity = 68/121 (56.20%), Postives = 92/121 (76.03%), Query Frame = 1
Query:    1 QRSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGG-VNVSLRMRLSTRQVVRGLRQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVR 360
            + ++PP +CFNLGS+GFLTPFE+  F  E+  ++ G    +SLRMRL    + +G  + E   F  LNEVV+DRG+SPYL N++CFCD+ ++T+VQADG+I++TPTGSTAYSMSAGGSMV 
Sbjct:  519 KTAMPPVVCFNLGSLGFLTPFEFDSFEEEISSILEGRECLLSLRMRLLCTLLKKGYPKKE---FQILNEVVVDRGASPYLCNLDCFCDNKYITTVQADGIIMSTPTGSTAYSMSAGGSMVH 636          
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: A0A7R9YAH9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAH9_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.690e-34
Identity = 73/120 (60.83%), Postives = 89/120 (74.17%), Query Frame = 1
Query:    4 RSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGG-GVNVSLRMRLSTRQVVRGLRQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVR 360
            + VPP LCFN+GSMGFLTPFE+  +RT L       GV ++ R RL    ++R    +E R  H LNEVV+DRG+SP+LS +EC+ D AHLT+VQADGLII+TPTGSTAYSMSAGGSMV 
Sbjct:  216 KPVPPLLCFNMGSMGFLTPFEFHEYRTILDAAFRSPGVPITPRTRLDC-SIMRKGGVIEHR--HVLNEVVVDRGASPHLSQLECYVDGAHLTTVQADGLIISTPTGSTAYSMSAGGSMVH 332          
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Match: A0A1X6P8S9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8S9_PORUM)

HSP 1 Score: 132 bits (332), Expect = 7.280e-34
Identity = 69/117 (58.97%), Postives = 86/117 (73.50%), Query Frame = 1
Query:   10 VPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGGVNVSLRMRLSTRQVVRGLRQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLIIATPTGSTAYSMSAGGSMVR 360
            VPP L FNLGS+GFLTPF++  F   +  V  G   +SLRMRL+   +  G+   E   F  LNEVV+DRG+SPYLSN++CFCD   +T+VQADG+I++TPTGSTAYSMSAGGSMV 
Sbjct:  327 VPPVLSFNLGSLGFLTPFDFKDFERNMGNVFRGQCLLSLRMRLTCSVLRAGVVVKE---FDVLNEVVVDRGASPYLSNLDCFCDGKLITTVQADGIIMSTPTGSTAYSMSAGGSMVH 440          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13922.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIF0_ECTSI6.550e-5373.55NAD(+) kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A7S0BNN1_9RHOD1.310e-4160.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
R7QCX7_CHOCR1.750e-3963.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J0X2_9FLOR6.110e-3960.00NAD kinase 2, chloroplastic n=1 Tax=Gracilariopsis... [more]
A0A6T6C9C9_9RHOD3.830e-3758.33Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S4DFR2_HETAK5.600e-3762.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5J4YX33_PORPP4.700e-3557.50NAD kinase 2, chloroplastic n=1 Tax=Porphyridium p... [more]
M2Y8C7_GALSU1.110e-3456.20NAD+ kinase n=1 Tax=Galdieria sulphuraria TaxID=13... [more]
A0A7R9YAH9_9STRA2.690e-3460.83Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1X6P8S9_PORUM7.280e-3458.97Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13922contigP-wetherbeei_contig13922:318..967 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIF0
PFAMsNAD_kinase
Model size363
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K00858
KEGG ReactionR00104
KEGG Pathwayko00760,ko01100,map00760,map01100
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.07e-53
EggNOG OGsCOG0061@1|root,KOG2178@2759|Eukaryota
EC2.7.1.23
DescriptionNADP biosynthetic process
Cds size363
COG categoryG
BiGG ReactioniRC1080.CRv4_Au5_s7_g13893_t1
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186002.0287414-CDS-P-wetherbeei_contig13922:317..4961683186002.0287414-CDS-P-wetherbeei_contig13922:317..496Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13922 318..496 +
1683186002.0399737-CDS-P-wetherbeei_contig13922:783..9671683186002.0399737-CDS-P-wetherbeei_contig13922:783..967Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13922 784..967 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13922.1.1prot_P-wetherbeei_contig13922.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13922 318..967 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13922.1.1

>prot_P-wetherbeei_contig13922.1.1 ID=prot_P-wetherbeei_contig13922.1.1|Name=mRNA_P-wetherbeei_contig13922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp
QRSVPPHLCFNLGSMGFLTPFEYAGFRTELRRVMGGGVNVSLRMRLSTRQ
VVRGLRQLEPRVFHALNEVVIDRGSSPYLSNIECFCDDAHLTSVQADGLI
IATPTGSTAYSMSAGGSMVRC
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mRNA from alignment at P-wetherbeei_contig13922:318..967+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13922.1.1 ID=mRNA_P-wetherbeei_contig13922.1.1|Name=mRNA_P-wetherbeei_contig13922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=650bp|location=Sequence derived from alignment at P-wetherbeei_contig13922:318..967+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCGCTCTGTGCCGCCGCACCTGTGCTTCAACCTGGGGTCGATGGGCTT TTTGACGCCGTTCGAGTACGCGGGCTTCCGGACGGAGCTGCGGCGGGTCA TGGGCGGTGGCGTCAACGTCAGCCTGCGGATGCGACTGTCCACCAGGCAA GTTGTTCGGGGCTTGCGGCAGTTGGAACCGTTCGGGGCCGTGGCGGCAGC GACAGAAGACTTGGTCTACGCATCTTCCTCCTCTGAGATTTAATATCACC AGGGCCACCGATGTCTGCTCAGCCGTGCCTTCTCATTGTACACCCCCTTC CCACACCGCAACCGTATTGTTCTGCAGTGCTTGGACTGTTTTCCCTTTGA AACTGCCTTCTAAAACCGCTGTGCACCGGCCCCTTGCACCTGCCGCTCCG ACACCGCCGCCGTTGCGGTTCGGCGCCGGAAAACGCAAACAGGATCGTAC GGCAGGGCAAGCCGAGCCGCGTGTTCCATGCGCTGAACGAGGTGGTGATC GACCGCGGCAGCTCGCCATACCTATCCAACATCGAGTGCTTCTGCGACGA TGCCCACCTCACGTCGGTGCAGGCCGACGGGCTCATCATCGCCACGCCCA CGGGCTCCACGGCGTACAGCATGAGCGCCGGCGGCAGCATGGTGCGTTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13922:318..967+

>mRNA_P-wetherbeei_contig13922.1.1 ID=mRNA_P-wetherbeei_contig13922.1.1|Name=mRNA_P-wetherbeei_contig13922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig13922:318..967+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCGCTCTGTGCCGCCGCACCTGTGCTTCAACCTGGGGTCGATGGGCTT
TTTGACGCCGTTCGAGTACGCGGGCTTCCGGACGGAGCTGCGGCGGGTCA
TGGGCGGTGGCGTCAACGTCAGCCTGCGGATGCGACTGTCCACCAGGCAA
GTTGTTCGGGGCTTGCGGCAGTTGGAACCCCGCGTGTTCCATGCGCTGAA
CGAGGTGGTGATCGACCGCGGCAGCTCGCCATACCTATCCAACATCGAGT
GCTTCTGCGACGATGCCCACCTCACGTCGGTGCAGGCCGACGGGCTCATC
ATCGCCACGCCCACGGGCTCCACGGCGTACAGCATGAGCGCCGGCGGCAG
CATGGTGCGTTGC
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