mRNA_P-wetherbeei_contig13900.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13900.2.1
Unique NamemRNA_P-wetherbeei_contig13900.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: A0A1F4BP63_9PROT (Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BP63_9PROT)

HSP 1 Score: 371 bits (952), Expect = 9.620e-128
Identity = 193/253 (76.28%), Postives = 210/253 (83.00%), Query Frame = 1
Query:    1 MRPAHWAVIFLMLATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRRMDG 759
            MRP HWAVI  + + + ASFAYL LD+G + + E+ A MW Y V FFPPD S  YL Q  +GTLETIAISAVGT LAAV GMLLALPASGR+G  AR VAR VLNFLRSIPELVWAALMV A GLGPFAGTLALAWHTTGVIGRLFAETLENAP EP  ALQL+G  P+ AFLYGTMPNV+ QFVAY+LYRWEINIRMAA+LGVVGAGGLGQMLY SLSLF Q QAMT+I+AMLVLV +VD ASAWLRR M G
Sbjct:    1 MRPMHWAVIAALASAVWASFAYLSLDLGHLLTTEAQALMWNYVVSFFPPDLSGEYLVQIGQGTLETIAISAVGTALAAVFGMLLALPASGRYGTVARAVARLVLNFLRSIPELVWAALMVIAAGLGPFAGTLALAWHTTGVIGRLFAETLENAPAEPVQALQLSGCRPSLAFLYGTMPNVLPQFVAYSLYRWEINIRMAAILGVVGAGGLGQMLYFSLSLFHQQQAMTVILAMLVLVVLVDTASAWLRRAMTG 253          
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: A0A1F4DEE6_9PROT (Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DEE6_9PROT)

HSP 1 Score: 355 bits (910), Expect = 2.290e-121
Identity = 182/251 (72.51%), Postives = 208/251 (82.87%), Query Frame = 1
Query:    1 MRPAHWAVIFLMLATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRRM 753
            M+P HW V+ +++     SFA+L LD+G + +A++ AQMWKY V FFPPD S  YLA+   GTLETIAISA+GT LAAV G+LLA PA+GRFG  AR VAR +LNFLRSIPELVWAALMV A GLGPF+GTLALA HT GVIGRLFAETLEN PPEP  ALQL+G+    AFLYGTMPNV+ Q VAY+LYRWEINIRMAA+LGVVGAGGLGQMLY SLSLFQQ QA+T+I+AMLVLVAIVD ASAWLRRR+
Sbjct:    1 MKPVHWLVVAVLIVVTWVSFAFLSLDLGLLLTADARAQMWKYLVSFFPPDLSAEYLARIGYGTLETIAISAIGTALAAVLGLLLAPPAAGRFGVVARAVARLILNFLRSIPELVWAALMVMAAGLGPFSGTLALALHTAGVIGRLFAETLENTPPEPTQALQLSGSRATLAFLYGTMPNVVPQLVAYSLYRWEINIRMAAILGVVGAGGLGQMLYFSLSLFQQRQALTVIIAMLVLVAIVDGASAWLRRRL 251          
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: A0A0S8BWE6_9PROT (Phosphonate ABC transporter permease n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8BWE6_9PROT)

HSP 1 Score: 336 bits (862), Expect = 3.140e-114
Identity = 174/236 (73.73%), Postives = 197/236 (83.47%), Query Frame = 1
Query:   52 ASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRRMDG 759
            ASFA+L LD+GQ+ S E+  QMW+Y   FFPPD S  YLA+   GTLET+AISA GT LAAV G+LLA+PA+GRFGP  R  AR +LNFLRSIPELVWAALMV A G  PFAGTLALAWHT GVIGRLFAETLENAP EPA ALQL G     AFLYGTMPNV+ Q VAY+LYRWEINIRMAA+LGVVGAGGLGQ+LY+SLSLFQQPQA+T+I+AML+LVA+VD ASAWLR+R+ G
Sbjct:    9 ASFAFLSLDLGQLASLEALGQMWRYVAAFFPPDLSRPYLARVGVGTLETLAISATGTALAAVLGLLLAVPAAGRFGPLPRAAARLLLNFLRSIPELVWAALMVIAAG--PFAGTLALAWHTAGVIGRLFAETLENAPQEPAQALQLTGGRAPLAFLYGTMPNVVPQLVAYSLYRWEINIRMAAILGVVGAGGLGQLLYVSLSLFQQPQALTVIIAMLLLVALVDGASAWLRQRLAG 242          
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: A0A7V8ZQR4_9BURK (Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V8ZQR4_9BURK)

HSP 1 Score: 310 bits (794), Expect = 1.000e-103
Identity = 162/251 (64.54%), Postives = 192/251 (76.49%), Query Frame = 1
Query:    1 MRPAHWAVIFLMLATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRRM 753
            M   +W+    ++A    SF YL LD+ Q+F+ + A +M +Y+  FFPPD S  YL +A RG  ET+AISA+GT LAA+ G+ LALPA+G FG   R  ++ VLNFLR++PELVWAA+MV A GLGPFAGTLALA HT GV+GRLFAETLEN P EP LAL  AG+  + AF+YGT+P  I QFVAY LYRWE NIRMAAVLG VGAGGLGQMLY SLSLFQQ QA TII+AMLVLVAIVDA SAWLR+R+
Sbjct:    1 MAAFYWSTALGLVAVTWLSFHYLALDLSQLFTIKEATRMTQYAASFFPPDLSADYLVRAARGMAETLAISAIGTALAALAGVFLALPAAGYFGAVVRAASKLVLNFLRAVPELVWAAIMVLAAGLGPFAGTLALAVHTAGVLGRLFAETLENTPREPQLALSDAGSPASAAFIYGTLPAAIPQFVAYALYRWEYNIRMAAVLGFVGAGGLGQMLYFSLSLFQQQQACTIILAMLVLVAIVDAVSAWLRKRL 251          
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: A0A2W5FS34_9RHOO (Phosphonate ABC transporter, permease protein PhnE n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2W5FS34_9RHOO)

HSP 1 Score: 310 bits (794), Expect = 1.110e-103
Identity = 169/251 (67.33%), Postives = 193/251 (76.89%), Query Frame = 1
Query:    1 MRPAHWAVIFLMLATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRRM 753
            MR   WA +  + A +V SF  L L++  +FSAE+A QM  Y+  FFPPD S   L QA RG LET+AISAVGTLLAA  G+ LALPASGR G A R+  R VLNFLRS+PELVWAALMV A GLGPFAGTLALA HT+GV+GRLFAETLENAPPEPA  L+ +GA    AFLYGT+P  + QF+AY LYRWEINIRMA VLG VGAGGLGQMLY+SLSLFQQ QA+T+I  ML+LV   DA SAWLRRR+
Sbjct:    1 MRVERWAAVIGLAAAVVLSFRALSLNLQALFSAEAARQMLDYARGFFPPDLSAPLLQQAARGALETLAISAVGTLLAAAGGLALALPASGRLGWAPRLAFRAVLNFLRSVPELVWAALMVLAAGLGPFAGTLALALHTSGVLGRLFAETLENAPPEPARTLRDSGAPAVIAFLYGTLPGALPQFIAYGLYRWEINIRMATVLGFVGAGGLGQMLYVSLSLFQQSQALTLIGTMLLLVLGADALSAWLRRRL 251          
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: A0A2M7Y0U7_9RHOO (Phosphonate ABC transporter, permease protein PhnE n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A2M7Y0U7_9RHOO)

HSP 1 Score: 309 bits (792), Expect = 3.600e-103
Identity = 159/245 (64.90%), Postives = 193/245 (78.78%), Query Frame = 1
Query:   16 WAVIFLMLATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRR 750
            W  + L+   +  SFAYL +D+  +FS ES + M ++ ++FFPPD    +L +  RGT+ET+AISA+GTLLAA  G+LLALPA+GRFG A ++  RF+LNFLRS+PELVWAALMV A GLGPFAGTLALA HT+GV+GRLFAE+LENAPPEPA AL L GA PA AF Y T+P +  Q VAY+LYRWE+NIRMA VLG VGAGGLGQMLY  LSL  +PQA +II+AML LV +VDAASAW+RRR
Sbjct:   20 WLTVLLLAVLVWTSFAYLSVDLSSLFSIESGSSMARFILRFFPPDLGGEFLRRIARGTIETLAISALGTLLAAGAGVLLALPAAGRFGAALKVATRFLLNFLRSVPELVWAALMVLAAGLGPFAGTLALALHTSGVLGRLFAESLENAPPEPARALTLGGAAPALAFAYATLPLITPQLVAYSLYRWEMNIRMATVLGFVGAGGLGQMLYYELSLLHEPQACSIILAMLALVVLVDAASAWIRRR 264          
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: A0A1F4ENT4_9PROT (Phosphonate ABC transporter, permease protein PhnE n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4ENT4_9PROT)

HSP 1 Score: 306 bits (785), Expect = 2.340e-102
Identity = 163/247 (65.99%), Postives = 193/247 (78.14%), Query Frame = 1
Query:   16 WAVIFLMLATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAG-AFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRRM 753
            W    L LA   ASF YL +D+GQ+F+AES  Q+ +Y+ +FFPP+ S  YL Q  RG +ET+A+SA+GTLLA   G+ LAL ASGRFG  ARM  R VLNFLRS+PELVW ALMV A GLGPFAGTLAL  HTTGV+GRLFAE LENAPPEPA AL  AG+ PAG AFLYGT+P V  Q V+Y+LYRWE+N+RMAAVLG VGAGGLGQMLY  LSL ++ +A T+I+AML LV ++DAASAWLRRR+
Sbjct:    8 WLAAALALAAAWASFRYLSIDLGQLFNAESGRQLAQYAARFFPPETSADYLRQIARGAVETLAVSALGTLLAMAAGLALALLASGRFGAPARMAVRLVLNFLRSVPELVWGALMVLAAGLGPFAGTLALGLHTTGVLGRLFAEALENAPPEPAQALAGAGS-PAGLAFLYGTLPLVTPQLVSYSLYRWEMNVRMAAVLGFVGAGGLGQMLYYELSLLREARACTVIIAMLALVILIDAASAWLRRRL 253          
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: UPI001CC02C72 (phosphonate ABC transporter, permease protein PhnE n=1 Tax=Pseudomonas nanhaiensis TaxID=2830842 RepID=UPI001CC02C72)

HSP 1 Score: 306 bits (783), Expect = 4.710e-102
Identity = 158/238 (66.39%), Postives = 194/238 (81.51%), Query Frame = 1
Query:   31 LMLATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLR 744
            L++A ++ASF+YL LD+  +FSA+SA QM  Y+  FFPPD SP +L Q  +G LET+ ISA+GTLLAA  G +L+L A+GR G  A+  AR +LN LRS+PELVWAALMV A GLGPFAGTLA+A HTTGV+GRLFAE LENAP  PA AL+ AGA P   F YGT+PNVI Q++AY+LYRWE NIRMAAVLG VGAGGLGQMLY++LSLFQQP+AM++I+AML++V +VDAAS+WLR
Sbjct:   12 LIVAALLASFSYLELDLAALFSAQSAGQMASYAAGFFPPDTSPAWLGQLGQGALETLGISAIGTLLAAFSGAMLSLLAAGRLGRIAKASARLLLNALRSVPELVWAALMVLAAGLGPFAGTLAIALHTTGVLGRLFAEALENAPQAPASALREAGAGPVACFFYGTLPNVIPQWLAYSLYRWENNIRMAAVLGFVGAGGLGQMLYVTLSLFQQPRAMSVILAMLLMVIVVDAASSWLR 249          
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: UPI00131C256C (phosphonate ABC transporter, permease protein PhnE n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131C256C)

HSP 1 Score: 306 bits (784), Expect = 4.820e-102
Identity = 158/246 (64.23%), Postives = 195/246 (79.27%), Query Frame = 1
Query:   16 WAVIFLMLATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRRM 753
            W  +  +LA +VASFAYL +D   + SAES   M ++  +FFPPD +P +LA+A  G L+T+A+SA+G+LLAA  G +LALPASGR G   R + RFVLNFLRS+PELVWA LMV AVG+GPFAG LALA HTTGV+GRLFAE+LENAP EP  AL+L G+  A AF YG++P V+ Q+VAYTLYRWE+NIRMAAVLG VG GGLGQ+LY  LS+FQQPQAMT+++AM +LVA+VDAASA LRR +
Sbjct:   14 WTALAALLAAVVASFAYLAVDYRALLSAESLGLMGRFIAEFFPPDLAPAFLARAGWGALQTLAVSALGSLLAAAAGAVLALPASGRAGATLRRIVRFVLNFLRSVPELVWAVLMVLAVGIGPFAGALALALHTTGVLGRLFAESLENAPREPEEALRLGGSGAAAAFGYGSLPLVLPQWVAYTLYRWEMNIRMAAVLGFVGGGGLGQLLYFHLSIFQQPQAMTVLIAMFLLVALVDAASARLRRAL 259          
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Match: A0A3N4AS87_9PSED (Phosphonate ABC transporter, permease protein PhnE n=5 Tax=root TaxID=1 RepID=A0A3N4AS87_9PSED)

HSP 1 Score: 303 bits (776), Expect = 5.640e-101
Identity = 158/238 (66.39%), Postives = 190/238 (79.83%), Query Frame = 1
Query:   40 ATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPDFSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVARFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETLENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAAVLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRRM 753
            A +VASFAYL LD   +FS +S AQM  Y+  FFPP+ S G+L + W+GTLET+AISA+GTLLAA  G L +L A+GR G  A+ + R +LN LRS+PELVWAALMV A GLGPFAGTLA+A HTTGV+GRLFAE LEN PPEPA AL+ AGA    AFLYGT+P VI Q++AYTLYRWE NIRMAAVLG VGAGGLGQML+++LSLFQQ +AM++I+AML +V +VDA S WLR R+
Sbjct:   16 AAVVASFAYLQLDFASLFSTDSRAQMLDYAGSFFPPNTSAGWLNKLWQGTLETLAISAIGTLLAAFFGALFSLLAAGRLGNMAKALCRLLLNALRSVPELVWAALMVLAAGLGPFAGTLAIALHTTGVLGRLFAEALENTPPEPANALRAAGASATTAFLYGTLPGVIPQWLAYTLYRWENNIRMAAVLGFVGAGGLGQMLHVTLSLFQQSKAMSVILAMLAMVLLVDALSGWLRARL 253          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13900.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4BP63_9PROT9.620e-12876.28Phosphonate ABC transporter, permease protein PhnE... [more]
A0A1F4DEE6_9PROT2.290e-12172.51Phosphonate ABC transporter, permease protein PhnE... [more]
A0A0S8BWE6_9PROT3.140e-11473.73Phosphonate ABC transporter permease n=1 Tax=Betap... [more]
A0A7V8ZQR4_9BURK1.000e-10364.54Phosphonate ABC transporter, permease protein PhnE... [more]
A0A2W5FS34_9RHOO1.110e-10367.33Phosphonate ABC transporter, permease protein PhnE... [more]
A0A2M7Y0U7_9RHOO3.600e-10364.90Phosphonate ABC transporter, permease protein PhnE... [more]
A0A1F4ENT4_9PROT2.340e-10265.99Phosphonate ABC transporter, permease protein PhnE... [more]
UPI001CC02C724.710e-10266.39phosphonate ABC transporter, permease protein PhnE... [more]
UPI00131C256C4.820e-10264.23phosphonate ABC transporter, permease protein PhnE... [more]
A0A3N4AS87_9PSED5.640e-10166.39Phosphonate ABC transporter, permease protein PhnE... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13900contigP-wetherbeei_contig13900:747..1508 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog595537.Varpa_4730
Preferred namephnE
PFAMsBPD_transp_1
Model size762
Max annot lvl28216|Betaproteobacteria
KEGG koko:K02042
KEGG TC3.A.1.9
KEGG Pathwayko02010,map02010
KEGG ModuleM00223
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.55e-99
EggNOG OGsCOG3639@1|root,COG3639@2|Bacteria,1MW4F@1224|Proteobacteria,2VKCA@28216|Betaproteobacteria,4AAV0@80864|Comamonadaceae
DescriptionBinding-protein-dependent transport system inner membrane component
Cds size762
COG categoryP
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186001.2844603-CDS-P-wetherbeei_contig13900:746..15081683186001.2844603-CDS-P-wetherbeei_contig13900:746..1508Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13900 747..1508 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13900.2.1prot_P-wetherbeei_contig13900.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13900 747..1508 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13900.2.1

>prot_P-wetherbeei_contig13900.2.1 ID=prot_P-wetherbeei_contig13900.2.1|Name=mRNA_P-wetherbeei_contig13900.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp
MRPAHWAVIFLMLATMVASFAYLGLDIGQMFSAESAAQMWKYSVQFFPPD
FSPGYLAQAWRGTLETIAISAVGTLLAAVCGMLLALPASGRFGPAARMVA
RFVLNFLRSIPELVWAALMVFAVGLGPFAGTLALAWHTTGVIGRLFAETL
ENAPPEPALALQLAGAHPAGAFLYGTMPNVISQFVAYTLYRWEINIRMAA
VLGVVGAGGLGQMLYMSLSLFQQPQAMTIIVAMLVLVAIVDAASAWLRRR
MDG*
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mRNA from alignment at P-wetherbeei_contig13900:747..1508-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13900.2.1 ID=mRNA_P-wetherbeei_contig13900.2.1|Name=mRNA_P-wetherbeei_contig13900.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig13900:747..1508- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGACCCGCGCACTGGGCCGTAATTTTTTTGATGCTGGCAACGATGGT GGCGAGCTTTGCTTACCTGGGGCTCGACATTGGTCAGATGTTTTCGGCGG AGTCGGCGGCGCAGATGTGGAAATATTCCGTGCAATTCTTCCCGCCTGAT TTCTCGCCGGGTTACCTTGCACAGGCGTGGCGCGGCACGCTGGAAACGAT AGCGATTTCGGCGGTGGGTACGCTGCTGGCGGCTGTGTGCGGTATGCTGC TTGCGCTGCCGGCGTCAGGCAGGTTCGGTCCTGCCGCGCGGATGGTCGCG CGTTTTGTGCTTAATTTCCTGCGCTCGATTCCCGAACTGGTGTGGGCCGC GCTGATGGTGTTTGCGGTCGGACTCGGGCCATTTGCCGGCACGCTAGCGC TCGCGTGGCATACCACTGGCGTCATCGGCCGGTTATTCGCGGAAACTCTC GAAAACGCCCCGCCCGAGCCGGCGCTGGCGCTGCAGCTGGCGGGGGCGCA TCCGGCTGGCGCATTTTTATACGGCACTATGCCAAACGTGATTTCGCAAT TCGTCGCTTATACGCTGTACCGCTGGGAAATTAACATACGAATGGCGGCC GTACTCGGCGTCGTGGGTGCCGGCGGCCTTGGGCAAATGCTCTACATGAG TCTCTCGTTGTTTCAACAGCCGCAGGCGATGACGATCATTGTCGCCATGC TGGTTTTGGTTGCGATCGTCGATGCGGCGAGCGCTTGGCTGCGTCGACGC ATGGACGGTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13900:747..1508-

>mRNA_P-wetherbeei_contig13900.2.1 ID=mRNA_P-wetherbeei_contig13900.2.1|Name=mRNA_P-wetherbeei_contig13900.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig13900:747..1508- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGACCCGCGCACTGGGCCGTAATTTTTTTGATGCTGGCAACGATGGT
GGCGAGCTTTGCTTACCTGGGGCTCGACATTGGTCAGATGTTTTCGGCGG
AGTCGGCGGCGCAGATGTGGAAATATTCCGTGCAATTCTTCCCGCCTGAT
TTCTCGCCGGGTTACCTTGCACAGGCGTGGCGCGGCACGCTGGAAACGAT
AGCGATTTCGGCGGTGGGTACGCTGCTGGCGGCTGTGTGCGGTATGCTGC
TTGCGCTGCCGGCGTCAGGCAGGTTCGGTCCTGCCGCGCGGATGGTCGCG
CGTTTTGTGCTTAATTTCCTGCGCTCGATTCCCGAACTGGTGTGGGCCGC
GCTGATGGTGTTTGCGGTCGGACTCGGGCCATTTGCCGGCACGCTAGCGC
TCGCGTGGCATACCACTGGCGTCATCGGCCGGTTATTCGCGGAAACTCTC
GAAAACGCCCCGCCCGAGCCGGCGCTGGCGCTGCAGCTGGCGGGGGCGCA
TCCGGCTGGCGCATTTTTATACGGCACTATGCCAAACGTGATTTCGCAAT
TCGTCGCTTATACGCTGTACCGCTGGGAAATTAACATACGAATGGCGGCC
GTACTCGGCGTCGTGGGTGCCGGCGGCCTTGGGCAAATGCTCTACATGAG
TCTCTCGTTGTTTCAACAGCCGCAGGCGATGACGATCATTGTCGCCATGC
TGGTTTTGGTTGCGATCGTCGATGCGGCGAGCGCTTGGCTGCGTCGACGC
ATGGACGGTTGA
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