mRNA_P-wetherbeei_contig1387.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: D7FJG0_ECTSI (Isochorismatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG0_ECTSI) HSP 1 Score: 208 bits (529), Expect = 1.430e-58 Identity = 109/207 (52.66%), Postives = 146/207 (70.53%), Query Frame = 2
Query: 1427 KKSVDYSVGEMAAA-AARTIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAELGIGESASSPLPHLAVFEKKLFSMCTDDVLTHLRGFGAGRRDVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQLAK 2044
+ S D V EMA A A+R +GK+ P +T F CDVQERFR+ I M +VI AKFMLDV++ L+VPC+VTEQYP+AL TV EL +G+ ++ +FEKKLFSMCT +V L+ R+D +L GIE HVCV QTCLDL++ GY VH+V D +SSQ+P DRAV +QRMQQ+GA +T+ E F+L+ +A++ F+A+S L K
Sbjct: 53 RASSDIPVVEMAVATASRRLGKIFPSSTVFFACDVQERFRDLIHNMPAVISTAKFMLDVSQELEVPCIVTEQYPKALLHTVPELNVGKGPDQI--NVPIFEKKLFSMCTKEVEEELKKL-PDRKDAVLFGIEAHVCVTQTCLDLLDLGYDVHVVCDGVSSQKPHDRAVALQRMQQSGAFLTSAEQVTFQLLHTAENEKFRAVSNLVK 256
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: A0A6H5KEX0_9PHAE (Isochorismatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEX0_9PHAE) HSP 1 Score: 205 bits (522), Expect = 2.120e-58 Identity = 104/195 (53.33%), Postives = 139/195 (71.28%), Query Frame = 2
Query: 1460 AAAAARTIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAELGIGESASSPLPHLAVFEKKLFSMCTDDVLTHLRGFGAGRRDVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQLAK 2044
AA A+R +GK+ P +T F CDVQERFR+ I M +VI AKFMLDV++ L+VPC+VTEQYP+AL TV EL +G ++ +FEKKLFSMCT +V L+ R+D +L GIE HVCV QTCLDL++ GY VH+V D +SSQ+P DRAV +QRMQQ+GA +T+ E F+L+ +A++ F+A+S L K
Sbjct: 3 AATASRRLGKILPSSTVFFACDVQERFRDLIHNMPAVISTAKFMLDVSQELEVPCIVTEQYPKALLHTVPELNVGNGPDQI--NVPIFEKKLFSMCTKEVEEELKKL-PDRKDAVLFGIEAHVCVTQTCLDLLDLGYEVHVVCDGVSSQKPHDRAVALQRMQQSGAFLTSAEQVTFQLLHTAENEKFRAVSNLVK 194
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: A0A6U1N7F4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N7F4_9STRA) HSP 1 Score: 193 bits (491), Expect = 9.360e-54 Identity = 100/206 (48.54%), Postives = 128/206 (62.14%), Query Frame = 2
Query: 1475 RTIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAELGIGESASSPL----------------PHLAVFEKKLFSMCTDDVLTHLRGFGAGRRDVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQLAK 2044
+++G+LRP +T +CD+QERFREKIW+ +V AK++++VA L+V V T QY +ALG V E+ + S P P V++KKLFSMCTD V L G G V+L GIE HVC+ QTCLDL+ G VH+V D SSQRP DR V +QRM +AGA VTT E+A FEL+G+A HP KAIS L K
Sbjct: 3 KSVGRLRPQSTIFLLCDIQERFREKIWKFGTVANTAKYLVEVAGELNVKVVATTQYAKALGAIVPEINLPVSTEVPAQDEEGTDTKPXXXXDTPAAVVYDKKLFSMCTDQVNAELEAAGEGLTSVVLFGIETHVCIQQTCLDLLSRGLEVHVVADGCSSQRPYDRGVALQRMARAGAFVTTAESAVFELLGTAQHPKLKAISNLTK 208
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: A0A6U3TC81_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TC81_9STRA) HSP 1 Score: 190 bits (483), Expect = 7.730e-53 Identity = 95/199 (47.74%), Postives = 136/199 (68.34%), Query Frame = 2
Query: 1457 MAAAAARTIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAE-LGIGESASSPLPHLAVFEKKLFSMCTDDVLTHLRGFGAGRR-DVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQLAKD 2047
M++AA R +GKL P ++ L VCDVQERFR I M +VI KFM VA+ L +PCV T+QY + G T+ + + + +P VFEKKLFSMCT++ HL + + L++GIE HVC+ QTCLDL+E G+ VH++ D +SSQ+ +DR + ++RM+Q+GA +TT ++AAF L+G AD+ NFKA+S+L KD
Sbjct: 1 MSSAARRAVGKLCPKSSVLLVCDVQERFRPLIHNMETVINTTKFMTAVAKELQIPCVATQQYTKVFGPTIPDAIADPNDIGTSIP---VFEKKLFSMCTEECSKHLASLSSSEKTSYLIVGIEAHVCLQQTCLDLLEQGHDVHIIADGVSSQQKIDRDIALKRMEQSGAWITTCQSAAFMLLGGADNANFKAVSKLVKD 196
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: D8UKC4_VOLCA (Isochorismatase domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UKC4_VOLCA) HSP 1 Score: 185 bits (470), Expect = 4.800e-51 Identity = 104/193 (53.89%), Postives = 127/193 (65.80%), Query Frame = 2
Query: 1469 AARTIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAELGIGESASSPLPHLAVFEKKLFSMCTDDVLTHLRGFGAGRRDVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQLAKD 2047
AAR +G+LRP +++LFVCDVQE+FR I VI A+ M+ A LD+P +VTEQYP+ALG TV+E+ AS P V K LFSMCT DV L+ R V+LLGIE HVCV QT LDL+E GY VHL+VD ISS RP RA G+QRM QAGAL++ E A F+L + HP FK IS L K+
Sbjct: 2 AARALGRLRPDSSALFVCDVQEKFRPLIAGFPVVIDTARRMVQAANALDIPVMVTEQYPKALGSTVSEVAGVLPASCP-----VIAKTLFSMCTPDVDAWLKS-KPDVRQVMLLGIEAHVCVFQTSLDLLERGYEVHLLVDGISSSRPHHRAAGLQRMAQAGALISNSEMAMFQLAADSKHPRFKEISALVKE 188
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: A0A8J4G3L0_9CHLO (Isochorismatase domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4G3L0_9CHLO) HSP 1 Score: 184 bits (468), Expect = 9.280e-51 Identity = 102/193 (52.85%), Postives = 126/193 (65.28%), Query Frame = 2
Query: 1469 AARTIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAELGIGESASSPLPHLAVFEKKLFSMCTDDVLTHLRGFGAGRRDVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQLAKD 2047
A+R +G+LRP T+LFVCDVQE+FR I VI + M+ A LD+P +VTEQYP+ALG TV+E+ A++ P V K LFSMCT DV L+ R V+LLGIE HVCV QT LDL+E GY VHL+ D ISS RP RA G+QRM QAGAL++ E A F+L G + HP FK IS L K+
Sbjct: 2 ASRVLGRLRPSNTALFVCDVQEKFRPLIAGFPIVIDTTRRMVQAANVLDIPVMVTEQYPKALGSTVSEV-----ANALPPACPVVSKTLFSMCTPDVDAWLKS-KPDVRQVMLLGIEAHVCVFQTSLDLLERGYEVHLLADGISSSRPHHRAAGLQRMAQAGALISNSEMALFQLTGDSKHPRFKEISALVKE 188
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: A0A2P6VGK8_9CHLO (Isochorismatase domain-containing 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGK8_9CHLO) HSP 1 Score: 185 bits (470), Expect = 1.250e-50 Identity = 105/202 (51.98%), Postives = 134/202 (66.34%), Query Frame = 2
Query: 1445 SVGEMAAAA-ARTIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAELGIGESASSPLPHLAVFEKKLFSMCTDDVLTHLRGFGAGRRDVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQLAKD 2047
+V MAAAA R++G+L P T+L VCDVQERFR I +V+ ++ ML A L +P +VTEQYP+ALG TV EL SP V K LFSMCTD+V L G A ++ VL++GIE HVCVLQTCLDL+E GY VH+VVD +SSQR DR+V +QR+ QAGA + T E F++M + HP FKA+S L K+
Sbjct: 28 TVRAMAAAADGRSVGRLPPDETALLVCDVQERFRPVISGFPAVVDTSRRMLRAASALQLPVIVTEQYPKALGNTVEELQPHIPPGSP-----VVAKTLFSMCTDEVNAALEGLPAVKK-VLIVGIETHVCVLQTCLDLLERGYEVHIVVDGVSSQRLGDRSVALQRLAQAGAFLATSEMVMFQMMRNTGHPAFKAVSALCKE 223
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: W7U6T6_9STRA (Isochorismatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6T6_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.270e-50 Identity = 98/196 (50.00%), Postives = 131/196 (66.84%), Query Frame = 2
Query: 1460 AAAAARTIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAELGIGESASSPLPHLAVFEKKLFSMCTDDVLTHLRGFGAGRRDVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQLAKD 2047
A+ AR IGKL+P TT+ +CDVQERFR+ IW VI AKFM V + L +P + +EQYP+A G TV EL A++ + FEKK+FSM TD++ ++ R+ V+L GIE HVCV QT LDL+E GY VH++VD +SSQ+ DRAV ++RM++AGA +TT E+ F LM +A HP FK IS L K+
Sbjct: 22 ASNVARAIGKLQPKTTTFLLCDVQERFRDVIWHFPQVIRTAKFMTAVGQELQIPTLASEQYPKAFGATVPEL----KAAAVDYCIPTFEKKMFSMLTDELKAQMQ-CEPERKTVVLFGIEAHVCVQQTALDLLEQGYAVHILVDGVSSQKAHDRAVALRRMEKAGAFLTTAESLVFMLMQTASHPQFKTISFLIKE 212
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: A0A6V1K7V1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7V1_HETAK) HSP 1 Score: 184 bits (467), Expect = 2.970e-50 Identity = 96/194 (49.48%), Postives = 126/194 (64.95%), Query Frame = 2
Query: 1478 TIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAELGIG-----ESASSPLPHLAVFEKKLFSMCTDDVLTHLRGFGAGRRDVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQLAK 2044
++GKL+P +T +CDVQERFR I+Q +V+ +++++ ++R L +P + T+QY RA G T E+ + ES + + VFEKKLFSM TD+V T L G R V+L G E HVCV QTCLDL+E G VH+V D SSQRP DR V +QRM Q+GA VTT E+ F LM SA HPNFK +S L K
Sbjct: 5 SVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTK 198
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Match: A0A1E7FE23_9STRA (Isochorismatase hydrolase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE23_9STRA) HSP 1 Score: 183 bits (464), Expect = 5.340e-50 Identity = 90/194 (46.39%), Postives = 131/194 (67.53%), Query Frame = 2
Query: 1466 AAARTIGKLRPPTTSLFVCDVQERFREKIWQMHSVIPAAKFMLDVARTLDVPCVVTEQYPRALGRTVAELGIGESASSPLPHLA---VFEKKLFSMCTDDVLTHLRGFGAGRRDVLLLGIEGHVCVLQTCLDLVEHGYTVHLVVDAISSQRPLDRAVGIQRMQQAGALVTTVEAAAFELMGSADHPNFKAISQL 2038
+++ ++GKL+P T +CD+Q+RFR W+ ++I AK+M VA+ LD+P V+T+QY + G TV + + H A +FEKK FSMCTD+V +H++ R V++ GIE HVCV QTCLDL+E G VH++ D++SSQ+P DR + + RM QAGA +TT ++AAF LM SA+H NFKA+S+L
Sbjct: 15 SSSTSVGKLKPENTVFLLCDIQDRFRPLTWRGETIINTAKYMTSVAKELDIPIVITQQYTKVFGETVKDTFADQE------HFASCKIFEKKRFSMCTDEVKSHMQTLN--RDSVVIFGIEAHVCVQQTCLDLLEDGKEVHIIADSVSSQQPYDRELALNRMSQAGAFLTTAQSAAFMLMQSAEHANFKAVSKL 200 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1387.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1387.1.2 >prot_P-wetherbeei_contig1387.1.2 ID=prot_P-wetherbeei_contig1387.1.2|Name=mRNA_P-wetherbeei_contig1387.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp MLRLELYDSKKVLSLTSNFLACARLLLALVTAPVMSKKEVLFHMQEKREEback to top mRNA from alignment at P-wetherbeei_contig1387:94..2657+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1387.1.2 ID=mRNA_P-wetherbeei_contig1387.1.2|Name=mRNA_P-wetherbeei_contig1387.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2564bp|location=Sequence derived from alignment at P-wetherbeei_contig1387:94..2657+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1387:94..2657+ >mRNA_P-wetherbeei_contig1387.1.2 ID=mRNA_P-wetherbeei_contig1387.1.2|Name=mRNA_P-wetherbeei_contig1387.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig1387:94..2657+ (Phaeothamnion wetherbeei SAG_119_79)back to top |