mRNA_P-wetherbeei_contig13725.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13725.1.1
Unique NamemRNA_P-wetherbeei_contig13725.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A6I3WPY8_9ACTN (Cytochrome c domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3WPY8_9ACTN)

HSP 1 Score: 276 bits (706), Expect = 1.050e-89
Identity = 184/274 (67.15%), Postives = 208/274 (75.91%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGEPAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVVAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASRGHLVYNGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTVAD--KVKDTLPVGTAPRKGT 816
            MTEIPEHLLKR+ ERR+AL     XXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXX       + AAK RK+IPFWAMATLS+LP+W FMYV+ L P    V+GPL DG   ++ CA+CH A G GG GR  + G VLKTFPHIEDQLNLVYTGSQAY+ +GVG YGDAS GHL YNG YMP QG+K GG+LTEAQILAVVCHERYDLGGA+  S  +AAEY  WC+ +S +Y  L+ GS TFD++    K    LPVGT PR GT
Sbjct:    1 MTEIPEHLLKRSKERRSALGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAY----ITAAKTRKKIPFWAMATLSLLPIWAFMYVQGLKPQAKKVTGPLADGAVVYSGCASCHGAAGGGGVGRVFSGGAVLKTFPHIEDQLNLVYTGSQAYKDSGVGAYGDASLGHLGYNGNYMPYQGAKAGGALTEAQILAVVCHERYDLGGADRTSTEWAAEYELWCSPESKVYVALESGSATFDSLDTMFKTDKVLPVGTKPRAGT 270          
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A7K0VI54_9ACTN (Cytochrome c domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K0VI54_9ACTN)

HSP 1 Score: 275 bits (703), Expect = 2.620e-89
Identity = 176/278 (63.31%), Postives = 198/278 (71.22%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGE-PAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVVAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASRGHLVYNGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTV-----ADKVKDTLPVGTAPRKGT 816
            MTEIPEHLLKR+ ERR A   + PA  XXXXXXXXXXX  XXXXXXXXXXXXXXX                 +AAAK RK+IPFWAMATLS+LP+WGFMYV+ L P    V+GP+ DG  ++  C  CH A G GG GR    G V KTFPHIEDQLNLVYTGSQAY+  GVGPYGDAS GHL YNG YMP QG+K GG+LTEAQI+AVVCHERYDLGGA+P S  +A+EY  WC+ ++ IYA +K GS  FD V     ADKV   LPVGT PR GT
Sbjct:    1 MTEIPEHLLKRSKERRTAEGADTPAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARPDPAF---------IAAAKTRKKIPFWAMATLSLLPIWGFMYVQGLKPQAREVTGPIADGVVQYAGCQNCHGAAGGGGVGRPFVAGAVQKTFPHIEDQLNLVYTGSQAYKDTGVGPYGDASLGHLGYNGNYMPMQGTKGGGALTEAQIVAVVCHERYDLGGADPASTQWASEYNLWCSPEAKIYAAIKGGSANFDNVDTVFKADKV---LPVGTVPRPGT 266          
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A524BAJ9_9ACTN (Cytochrome c domain-containing protein n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524BAJ9_9ACTN)

HSP 1 Score: 234 bits (597), Expect = 3.000e-73
Identity = 134/277 (48.38%), Postives = 164/277 (59.21%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGEPAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVVAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASR---GHLVY--NGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTVADKVKDTLPVGTAPRKGT 816
            MTEIPEHLLKR+ +R+A  SGE +                                             P VAAAK R RIP WAM TLS+LPL+ FMYVR L P +   SGP+  G+  + SCA+CH ADGSGG+GR L +GE L TFPHIED LN VY GS+A+   GV  YGD +R    H+ Y  NG+ MPAQGSKYGG+LT+ +IL +VCH RYDL GA+P    +A EY KWC+ +S I+A L+ GSLTFD+        L +GT PR GT
Sbjct:    1 MTEIPEHLLKRSRDRKAGGSGESSSAPATPGREVEAAPTAAPATRAAAPEPAAPPVKPDP---------PYVAAAKKRGRIPSWAMVTLSLLPLFVFMYVRGLQPQKAEASGPILVGQENYGSCASCHGADGSGGAGRVLKDGESLLTFPHIEDMLNWVYVGSEAFRAAGVASYGDPNREGGAHVPYSYNGSPMPAQGSKYGGALTDYEILGLVCHIRYDLSGADPAGE-WAEEYEKWCSPESEIFANLEGGSLTFDS------PELNIGTDPRLGT 261          
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A7K1C6X4_9ACTN (Cytochrome c domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K1C6X4_9ACTN)

HSP 1 Score: 232 bits (592), Expect = 1.560e-72
Identity = 149/277 (53.79%), Postives = 184/277 (66.43%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGEPAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVVAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASR---GHLV--YNGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTVADKVKDTLPVGTAPRKGT 816
            MTEIPEHLLKR+ +R+A  +   A                      XXXXXXXXXXXXXXXXXXXX   P VAAAK+R+RIP+WAMATLS++P++ FMYVR L P +   SGP+  G  ++ +CA+CH ADG GG+GR L +GE  KTFPHIED LN VY G++AYE  GV  YGD +R    H    YNG+ MPAQGS  GG LT+ +IL +VCH RYD+ GA+P    +A EY KWC+ +SAI+ GL+DGSL FD+      +   VGTAPR GT
Sbjct:    1 MTEIPEHLLKRSRDRKAGGASSEAS------------SAPVPATTEXXXXXXXXXXXXXXXXXXXXPDAPYVAAAKSRQRIPYWAMATLSLMPIFLFMYVRGLQPQKAEASGPIAIGIEQYGACASCHGADGGGGAGRVLKDGESQKTFPHIEDMLNWVYNGTEAYEAAGVASYGDPNREGGAHYPRSYNGSAMPAQGSMAGGGLTDYEILGLVCHIRYDISGADPAGE-WAEEYEKWCSPESAIFMGLEDGSLNFDS-----PELAGVGTAPRLGT 259          
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A0R2QU38_9ACTN (Cytochrome c domain-containing protein n=4 Tax=Acidimicrobiia TaxID=84992 RepID=A0A0R2QU38_9ACTN)

HSP 1 Score: 230 bits (587), Expect = 8.320e-72
Identity = 132/280 (47.14%), Postives = 160/280 (57.14%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGEPAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVVAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASR-----GHLVYNGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTVADKVKDTLP-----VGTAPRK 810
            MTEIPEHLLKR+ +R+ +    P+              V                                VAAAK+RK+IPFWAMATLS+LPLW FMYV +L P E  + GPL  G   + SCA CH A+G GG+GR L  GEV+KTFP IED LN VYTGSQAY T G+  YGD  R       L YNG  MP QG K GG+LTEAQIL VVCHERY +GG +P    +AAEY  WC+ +S I+  L+ G+ +F+T+ DK    LP     VG  PR+
Sbjct:    1 MTEIPEHLLKRSKDRQQS-GATPSTDVAATTPASAPAAVEKPIAPVVTKVLPDPAY---------------VAAAKSRKKIPFWAMATLSLLPLWAFMYVAALKPQEKVIEGPLAIGAIAYGSCAGCHGAEGQGGAGRTLYQGEVMKTFPKIEDMLNFVYTGSQAYVTAGLKVYGDPEREGGAHAPLSYNGNPMPMQGEKAGGALTEAQILGVVCHERYAIGGTDPKDEKWAAEYETWCSPESEIFLALEKGTSSFETI-DKDFSMLPGPPAHVGIEPRE 263          
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A4P5QYD2_9ACTN (Cytochrome c domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5QYD2_9ACTN)

HSP 1 Score: 229 bits (583), Expect = 4.040e-71
Identity = 143/278 (51.44%), Postives = 181/278 (65.11%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGEPAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVVAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASR-----GHLVYNGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTVAD--KVKDTLP--VGTAPR 807
            MTEIP++LLKR+ +RRA LSG                  XXXXXXXXXXXXXXXXX               V AAK+R++IPFWAMATLS+LP+W F Y+ +++P E   SGP+  G+  + +CA+CH A G GG+GR L+ GEVLKTFPHIED LN VYTGSQ Y +  +  YG+  R       L YNG  MPAQG  +GG L+  +IL VVCHERY +GGA+P S  +AAEYA WC+EDS I+A L+ GS+ F+T+A+   + +T P  VGT  R
Sbjct:    1 MTEIPDYLLKRSKDRRAVLSGGTPSAEPSASKEVAKTSTXXXXXXXXXXXXXXXXXRPDPAY---------VVAAKSRRKIPFWAMATLSLLPVWAFFYLLAVSPQEREASGPMAIGEAAYGACASCHGAAGQGGAGRVLHEGEVLKTFPHIEDMLNFVYTGSQPYVSADLAVYGNPDREGGAHAPLSYNGNAMPAQGESWGGGLSNYEILGVVCHERYAIGGADPKSEQWAAEYAMWCSEDSEIFAALEAGSVDFETLAETFSMLETPPREVGTQAR 269          
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A6I3ELP9_9ACTN (Cytochrome c domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3ELP9_9ACTN)

HSP 1 Score: 227 bits (579), Expect = 1.480e-70
Identity = 130/278 (46.76%), Postives = 167/278 (60.07%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGEPAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPV-VAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASR---GHLV--YNGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTVADKVKDTLPVGTAPRKGT 816
            MTEIPEHLLKR+ ER+AA  G+ +             E                               P  + AAK R RIP WAMATL+++P++ FMYVR L P +   SGP+  G   + +CA+CH ADG+GG+GR L  GEVLKTFPHIED LN VY G++AYE  GV  YGD +R    H    YNG+ MPAQG+  GG+LTE +IL ++CH RYD+ GA+ ++  +AAEY KWCA +S I+ GL+DGS+TFD+        L +GTAPR GT
Sbjct:    1 MTEIPEHLLKRSRERKAA-GGDASST-----------EASASTPATTAAAPVAKVVAETPIKAAVSKPEPAYIKAAKTRGRIPSWAMATLALMPIFLFMYVRGLQPQKAEASGPIALGIENYGACASCHGADGAGGAGRVLKGGEVLKTFPHIEDMLNWVYNGTEAYEAAGVATYGDPNREGGAHYPRSYNGSAMPAQGAMAGGALTEYEILGLICHIRYDISGAD-EAGDWAAEYEKWCAPESEIFLGLEDGSMTFDS------PELMIGTAPRLGT 259          
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A4P5RBD1_9ACTN (Cytochrome c domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5RBD1_9ACTN)

HSP 1 Score: 226 bits (575), Expect = 6.520e-70
Identity = 148/281 (52.67%), Postives = 173/281 (61.57%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGEPAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVVAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASR---GH--LVYNGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTV----ADKVKDTLPVGTAPRKGT 816
            MTEIPEHLLKR+ ERR A SG  +        XXXXX  XXXXXXXXXXXXX                   V AAK RK+IPFWAMATLS+LPLW F+Y+ +L P E  V GP+  G   + +CA CH A G GG+GR    GEVLKTFP IED LN VYTGSQ Y   G+  YGD +R   GH  L YNG  MP QG K GG LTE +IL VVCHERY +GGA+P S  +  EY  WC+ +S I+  L++GS +FDT+    A   K    VGT  R+ T
Sbjct:    1 MTEIPEHLLKRSKERREAASGGASADSGTSTPXXXXXXXXXXXXXXXXXXXXPTPKPDPSY----------VVAAKTRKKIPFWAMATLSLLPLWAFLYLIALKPQEKEVEGPMAIGAAVYGTCAGCHGAAGQGGAGRVFAGGEVLKTFPKIEDMLNFVYTGSQPYVAAGIAYYGDPNREGGGHAPLSYNGNPMPQQGEKAGGGLTEYEILGVVCHERYAIGGADPASEEWKEEYETWCSPESEIFLALENGSTSFDTIDKDFAMLTKPPHAVGTTAREST 271          
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A7K0VR78_9ACTN (Cytochrome c domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K0VR78_9ACTN)

HSP 1 Score: 224 bits (572), Expect = 1.530e-69
Identity = 131/278 (47.12%), Postives = 156/278 (56.12%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGEPAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVVAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASR-----GHLVYNGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTV----ADKVKDTLPVGTAPR 807
            MTEIPEHLLKR+ +R+ +    P+              V                                VAAAK+RK+IPFWAMATLS+LPLW FMYV +L P E  V GPL  G   + SCA CH A+G GG+GR L  GEV+KTFP IED LN VYTGSQAY + G+  YGD  R       L YNG  MP QG K GG+LTEAQIL VVCHERY + GA+P S  +A EY  WC+  S I+  L+ G+ +F TV    A   K  + VG  PR
Sbjct:    1 MTEIPEHLLKRSKDRQQS-GATPSTDVAATTPASAPAAVEKPVVPVAPKALPDPAY---------------VAAAKSRKKIPFWAMATLSLLPLWAFMYVAALKPQEKVVEGPLAVGAAVYGSCAGCHGAEGQGGAGRVLYQGEVMKTFPKIEDMLNFVYTGSQAYASAGIKVYGDPDREGGAHAPLSYNGNPMPMQGEKAGGALTEAQILGVVCHERYAISGADPASKEWADEYNTWCSPTSEIFLALEKGTTSFATVDKDFAMLTKPPVLVGIEPR 262          
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Match: A0A6J7QZA3_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J7QZA3_9ZZZZ)

HSP 1 Score: 225 bits (573), Expect = 2.140e-69
Identity = 129/281 (45.91%), Postives = 158/281 (56.23%), Query Frame = 1
Query:    1 MTEIPEHLLKRAAERRAALSGEPAXXXXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPVVAAAKARKRIPFWAMATLSILPLWGFMYVRSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFPHIEDQLNLVYTGSQAYETNGVGPYGDASR-----GHLVYNGAYMPAQGSKYGGSLTEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLTFDTVAD--KVKDTLP--VGTAPRKGT 816
            +TEIPEHLLKR+ +R+   SG+ A                                             P VAAAK+RK+IPFWAMATLS+LPLWGF+Y  +L P    V GPL  G   +  CA C    G GG+GR L+ GEVLKTFPHIED LN VYTGSQAY + G+  YGD  R       L YNG  MP QG  YGG L+EA+IL VVCHERY +GGA+P S  +A EY  WC+ +S I+  L+ G  TFD+++    +  T P  +GT PR  T
Sbjct:   15 VTEIPEHLLKRSRDRK---SGDGASSSDSATSAEGSVPAVQKAVAPAKTAKNEPSVVLAKPDS------PRVAAAKSRKKIPFWAMATLSLLPLWGFLYAIALKPAAKVVEGPLAVGSHVYAGCAGCXXXXGQGGAGRILHQGEVLKTFPHIEDMLNFVYTGSQAYVSAGIKQYGDPKREGGAHAPLSYNGNPMPQQGETYGGGLSEAEILGVVCHERYVIGGADPKSEQWAEEYETWCSPESEIFKALETGGTTFDSISKDFSMLKTKPNEIGTKPRATT 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13725.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3WPY8_9ACTN1.050e-8967.15Cytochrome c domain-containing protein n=2 Tax=roo... [more]
A0A7K0VI54_9ACTN2.620e-8963.31Cytochrome c domain-containing protein n=2 Tax=roo... [more]
A0A524BAJ9_9ACTN3.000e-7348.38Cytochrome c domain-containing protein n=1 Tax=Aci... [more]
A0A7K1C6X4_9ACTN1.560e-7253.79Cytochrome c domain-containing protein n=2 Tax=roo... [more]
A0A0R2QU38_9ACTN8.320e-7247.14Cytochrome c domain-containing protein n=4 Tax=Aci... [more]
A0A4P5QYD2_9ACTN4.040e-7151.44Cytochrome c domain-containing protein n=1 Tax=Act... [more]
A0A6I3ELP9_9ACTN1.480e-7046.76Cytochrome c domain-containing protein n=2 Tax=roo... [more]
A0A4P5RBD1_9ACTN6.520e-7052.67Cytochrome c domain-containing protein n=1 Tax=Act... [more]
A0A7K0VR78_9ACTN1.530e-6947.12Cytochrome c domain-containing protein n=2 Tax=roo... [more]
A0A6J7QZA3_9ZZZZ2.140e-6945.91Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13725contigP-wetherbeei_contig13725:361..1188 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1313172.YM304_03980
Model size828
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.72e-59
EggNOG OGsCOG2010@1|root,COG2010@2|Bacteria,2H5KX@201174|Actinobacteria
DescriptionCytochrome c
Cds size828
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185995.5453079-CDS-P-wetherbeei_contig13725:360..11881683185995.5453079-CDS-P-wetherbeei_contig13725:360..1188Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13725 361..1188 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13725.1.1prot_P-wetherbeei_contig13725.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13725 361..1188 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13725.1.1

>prot_P-wetherbeei_contig13725.1.1 ID=prot_P-wetherbeei_contig13725.1.1|Name=mRNA_P-wetherbeei_contig13725.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp
MTEIPEHLLKRAAERRAALSGEPAAAAPAAAAPAAGTEVAAAAPAAAAAP
AARAAKTVPAAPPPPPPDIPVVAAAKARKRIPFWAMATLSILPLWGFMYV
RSLTPVEVTVSGPLGDGKTEFNSCATCHNADGSGGSGRQLNNGEVLKTFP
HIEDQLNLVYTGSQAYETNGVGPYGDASRGHLVYNGAYMPAQGSKYGGSL
TEAQILAVVCHERYDLGGAEPDSPAYAAEYAKWCAEDSAIYAGLKDGSLT
FDTVADKVKDTLPVGTAPRKGTGPS*
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mRNA from alignment at P-wetherbeei_contig13725:361..1188+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13725.1.1 ID=mRNA_P-wetherbeei_contig13725.1.1|Name=mRNA_P-wetherbeei_contig13725.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig13725:361..1188+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGAGATCCCCGAGCACCTGCTGAAGCGCGCCGCTGAACGACGTGC TGCGCTCAGTGGTGAACCCGCTGCCGCCGCACCCGCTGCCGCAGCGCCTG CCGCCGGCACCGAGGTGGCTGCTGCTGCCCCGGCCGCTGCCGCCGCGCCG GCCGCTCGGGCCGCCAAGACCGTGCCCGCAGCGCCGCCGCCCCCGCCGCC CGACATCCCCGTCGTCGCTGCCGCGAAGGCCCGCAAGCGGATCCCGTTCT GGGCAATGGCGACGCTCAGCATCCTGCCGCTGTGGGGCTTCATGTACGTC CGCTCGCTCACGCCGGTGGAGGTCACGGTGAGCGGACCTCTCGGCGACGG CAAGACCGAGTTCAACAGCTGCGCCACGTGCCACAACGCCGACGGGTCGG GCGGGTCCGGCCGGCAGCTGAACAACGGTGAGGTGCTGAAGACGTTCCCG CACATCGAGGATCAGCTGAACCTGGTGTACACCGGATCGCAGGCCTACGA GACCAACGGCGTCGGCCCGTACGGCGACGCGTCCCGCGGCCACCTCGTCT ACAACGGTGCGTACATGCCGGCACAGGGCTCCAAGTACGGCGGCTCGCTG ACCGAAGCGCAGATCCTCGCCGTCGTCTGCCACGAGCGCTACGACCTCGG TGGTGCCGAGCCGGATTCACCGGCGTACGCCGCCGAGTACGCCAAGTGGT GTGCCGAGGACAGCGCGATCTACGCCGGGTTGAAGGATGGCTCGCTCACC TTCGACACGGTCGCCGACAAGGTGAAGGACACGCTTCCCGTCGGTACGGC GCCGCGCAAGGGCACCGGACCCTCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13725:361..1188+

>mRNA_P-wetherbeei_contig13725.1.1 ID=mRNA_P-wetherbeei_contig13725.1.1|Name=mRNA_P-wetherbeei_contig13725.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig13725:361..1188+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGAGATCCCCGAGCACCTGCTGAAGCGCGCCGCTGAACGACGTGC
TGCGCTCAGTGGTGAACCCGCTGCCGCCGCACCCGCTGCCGCAGCGCCTG
CCGCCGGCACCGAGGTGGCTGCTGCTGCCCCGGCCGCTGCCGCCGCGCCG
GCCGCTCGGGCCGCCAAGACCGTGCCCGCAGCGCCGCCGCCCCCGCCGCC
CGACATCCCCGTCGTCGCTGCCGCGAAGGCCCGCAAGCGGATCCCGTTCT
GGGCAATGGCGACGCTCAGCATCCTGCCGCTGTGGGGCTTCATGTACGTC
CGCTCGCTCACGCCGGTGGAGGTCACGGTGAGCGGACCTCTCGGCGACGG
CAAGACCGAGTTCAACAGCTGCGCCACGTGCCACAACGCCGACGGGTCGG
GCGGGTCCGGCCGGCAGCTGAACAACGGTGAGGTGCTGAAGACGTTCCCG
CACATCGAGGATCAGCTGAACCTGGTGTACACCGGATCGCAGGCCTACGA
GACCAACGGCGTCGGCCCGTACGGCGACGCGTCCCGCGGCCACCTCGTCT
ACAACGGTGCGTACATGCCGGCACAGGGCTCCAAGTACGGCGGCTCGCTG
ACCGAAGCGCAGATCCTCGCCGTCGTCTGCCACGAGCGCTACGACCTCGG
TGGTGCCGAGCCGGATTCACCGGCGTACGCCGCCGAGTACGCCAAGTGGT
GTGCCGAGGACAGCGCGATCTACGCCGGGTTGAAGGATGGCTCGCTCACC
TTCGACACGGTCGCCGACAAGGTGAAGGACACGCTTCCCGTCGGTACGGC
GCCGCGCAAGGGCACCGGACCCTCCTGA
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