mRNA_P-wetherbeei_contig13669.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13669.1.1 vs. uniprot
Match: A0A2E0RTV7_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RTV7_9ACTN) HSP 1 Score: 607 bits (1564), Expect = 2.520e-207 Identity = 330/578 (57.09%), Postives = 396/578 (68.51%), Query Frame = 1
Query: 1 AAWRAADRVGHADGPLPTFDPIHVRGRIRWELLADTRRAAQQLVQAFSQIAEVDLSASPLPRMAVADDRTVAPGRRNYLPPADVAALPMGVWVEAGPYTAIEWAARGMPDAVGRAGFMRVSDTGYLGVYETSEGARWRIESTRPASGRRGLLDEGDASNFVAAQTEVGVVVSDRYPTLAATVLPPAVGPAPSGVFDRQHSNWRPLTLGRDERSEQRDLTDRVRLVVAPGPGGRWDSWVLADADIRQLPLAANSAAAKTAAETEGRRTIVQLAARAPQLADELIHDAAAAGTLTRELLVDVIGHRLDPADRARLADPAVQAADLAELLGATGVLTPLTTITVLAHEHVEADQVAALIPTIGLPIADGVRALSELWDVDRVVAGQMLGATVVELREAGCTPAEMLASHPREVLRSLDARPHTWELAAATLLESGMPVDAAVRQLAAHAPTPDAFAVAVFTIVENPIAAYAYSARHAQPDDLAALGERYGLDPDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAERHFNHSPMLIAP---VIDLTTGAGLRAALPLPTATGIDDLATQLVNLVSPT 1725
AAW A DR+GHA GPLP F+P VRGR+RWELLADTRRA Q+V AFS + DL+AS LPRM +A+DRTVA GR+NYL PADVAALP GVWVE GPYT EWAARG+P A GRAGF RVSDTGYL YET+EGARWRIESTR +G+RGLLDEG + +AQ + +VSDRYPTLAA V A P P VF W+PL RD R++ R LTDR++LVVAPGPGGRW++ V+ D+ IRQLPL A+ +AKTA E GRRT + AA PQLAD+LI DAA G+ TRELL DV+GHRL AD + +ADP + AA LAELL TGV+TP T + VL + D++A ++P IGLPI D VR L++ ++++R+ G ML A+V EL+ AGC+PAE+LAS+PREVLRSLDARPHTWE AA T++ESG + +R LAAHAPTP+ FA V TI + P A+A+SARHAQPDDLAALG Y L+P T AL+ RH N P + V+DLTT GLR ALP P AT DLA QL LV T
Sbjct: 210 AAWLALDRLGHAPGPLPGFEPTRVRGRLRWELLADTRRATDQIVSAFSDVLNHDLTASSLPRMDIAEDRTVAKGRQNYLAPADVAALPKGVWVEVGPYTVHEWAARGVPGADGRAGFFRVSDTGYLATYETAEGARWRIESTR--TGQRGLLDEGTTDDLPSAQRTICQIVSDRYPTLAALVPTEASDP-PVRVFTPNRDGWQPLADARDGRAQTRQLTDRIQLVVAPGPGGRWENLVITDSQIRQLPLVADEESAKTAVEGVGRRTALGHAAETPQLADQLISDAAVNGSFTRELLADVVGHRLADADASEIADPDIGAARLAELLADTGVVTPPTIVDVLVADGATVDEIARVVPQIGLPIPDAVRTLADRFEIERIEVGSMLSASVDELQSAGCSPAELLASYPREVLRSLDARPHTWETAATTMIESGTSMAGVIRHLAAHAPTPETFATGVATICDRPEIAFAHSARHAQPDDLAALGSIYELEPATTAQLLADAGTHPATAYETLVVACEGDIEIADALSIRHLNLDPATLDADDVVVDLTTAQGLRDALPTPAATSDLDLAEQLAALVDRT 784
BLAST of mRNA_P-wetherbeei_contig13669.1.1 vs. uniprot
Match: A0A2E0RSK5_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RSK5_9ACTN) HSP 1 Score: 417 bits (1071), Expect = 1.460e-133 Identity = 230/494 (46.56%), Postives = 308/494 (62.35%), Query Frame = 1
Query: 1 AAWRAADRVGHADGPLPTFDPIHVRGRIRWELLADTRRAAQQLVQAFSQIAEVDLSASPLPRMAVADDRTVAPGRRNYLPPADVAALPMGVWVEAGPYTAIEWAARGMPDAVGRAGFMRVSDTGYLGVYETSEGARWRIESTRPASGRRGLLDEGDASNFVAAQTEVGVVVSDRYPTLAATVLPPAVGPAPSGVFDRQHSNWRPLTLGRDERSEQRDLTDRVRLVVAPGPGGRWDSWVLADADIRQLPLAANSAAAKTAAETEGRRTIVQLAARAPQLADELIHDAAAA-GTLTRELLVDVIGHRLDPADRARLA---DPAVQAADLAELLGATGVLTPLTTITVLAHEHVEADQVAALIPTIGLPIADGVRALSELWDVDRVVAGQMLGATVVELREAGCTPAEMLASHPREVLRSLDARPHTWELAAATLLESGMPVDAAVRQLAAHAPTPDAFAVAVFTIVENPIAAYAYSARHAQPDDLAALGERYGLDP 1470
A W ADRVG A+GP+P FDP + R RW+ D RR+ +++ A S V+L++SPLPR + DDR V GRRNYL PAD+ LP+ VWVEAGPY EW ARG+ AVG FMRV+D YL VYET GA WR+E+T + GL+ +G++ + A + +V +++++P AA + SG F W L GRD+R++ R +R+ ++APGPGGRW +WV D + RQ P A ++ AA+T A+ R +++L+A P A+E++ D A + + R+ LV V+GHRL DR LA DPA L +LL TGVL P T + +L E V+ V + TIGLP AD R + + WDVDR+ G+ LGA ELREAGCTP EMLA PRE LR LD R HTWEL A TL+E+G + AVR LAAHAPTP+ FA V +V++P+ A++ + R+AQ +DLAAL ERY LDP
Sbjct: 206 AGWLVADRVGRAEGPMPGFDPSSLLSRERWQTAVDVRRSVDRVLGAVSFAIGVELTSSPLPRHDLVDDREVPAGRRNYLAPADLRGLPLAVWVEAGPYKRAEWLARGVAGAVGVGAFMRVNDRSYLAVYETKGGAMWRLETTGRGA-HLGLVGQGESDSLDAGKRDVAAALAEQFPDAAAAIDAVTTNRVVSGNF-----GWTALPEGRDDRTQHRVYDERITAMIAPGPGGRWQTWVAVDGEQRQGPYAPDANAARTIADGLARGALLELSAVTPSRANEMVLDLATSDASWDRDDLVAVVGHRLSDTDRHELATTEDPA----RLTDLLRDTGVLAPATMLHILRAEDVDVSDVYPIAATIGLPTADATRVIHQGWDVDRLTVGRELGADPHELREAGCTPVEMLAVAPREELRRLDQREHTWELVAPTLVEAGYTIAEAVRHLAAHAPTPETFAAGVAVLVDSPVEAFSLAGRYAQVEDLAALSERYLLDP 689
BLAST of mRNA_P-wetherbeei_contig13669.1.1 vs. uniprot
Match: UPI00034AF73D (hypothetical protein n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034AF73D) HSP 1 Score: 410 bits (1055), Expect = 7.580e-131 Identity = 234/501 (46.71%), Postives = 300/501 (59.88%), Query Frame = 1
Query: 1 AAWRAADRVGHADGPLPTFDPIHVRGRIRWELLADTRRAAQQLVQAFSQIAEVDLSASPLPRMAVADDRTVAPGRRNYLPPADVAALPMGVWVEAGPYTAIEWAARGMPDAVGRAGFMRVSDTGYLGVYETSEGARWRIESTRPASGRRGLLDEGDASNFVAAQTEVGVVVSDRYPTLA--------ATVLPPAVGPAPSGVFDRQHSNWRPLTLGRDERSEQRDLTDRVRLVVAPGPGGRWDSWVLADADIRQLPLAANSAAAKTAAETEGRRTIVQLAARAPQLADELIHDAAAAGTLTRELLVDVIGHRLDPADRARL---ADPAVQAADLAELLGATGVLTPLTTITVLAHEHVEADQVAALIPTIGLPIADGVRALSELWDVDRVVAGQMLGATVVELREAGCTPAEMLASHPREVLRSLDARPHTWELAAATLLESGMPVDAAVRQLAAHAPTPDAFAVAVFTIVENPIAAYAYSARHAQPDDLAALGERYGLDP 1470
A AA RVG A PLP DP + GR RW L D R AA ++V A S EVDLS SPLPR +ADDR VA GRRNYL PADV +LP+GVW+E GPY+ EW ARG+ A G FMRV+D YL YET GA WR+E+T + GL+ EG A + A+ +V + DR+P +A A VL P+ G W L GRDER+EQR+ +RV V PGPGGRW++WV D RQ PL N++AA+ AE +++LA+ AP A+ ++ +AA +G+ R +L ++GHRL +D L +DPA L EL+ + GVL P T + VL E V D V L+P +GLPI D +R + W +R+ G LGATV ELR+ GC+ EMLA+ PRE LR LD R TW+ TLLE+G A++ LAAHAPTP FAVA +V++P A+A S RHAQ DDLA L ER+G+ P
Sbjct: 206 AGLLAAGRVGRATEPLPVLDPNGLTGRERWRTLVDVRHAAGRVVDALSYGLEVDLSRSPLPRHELADDRQVASGRRNYLSPADVRSLPLGVWIEVGPYSKGEWLARGIAGANGVGAFMRVNDRSYLAAYETRAGAMWRLETTGRGA-HLGLVGEGAADDLAEAKRDVRAALRDRFPDVAVGVETSDRAKVLSPSFG-------------WVSLPTGRDERTEQREFDERVSARVHPGPGGRWEAWVSVDGQQRQGPLTENASAAREIAEGLAHGALIELASVAPDRANAMVTEAAGSGSWDRGMLASIVGHRLTDSDALELGTTSDPA----RLTELVKSAGVLAPATMLRVLHAEDVPLDTVIDLVPALGLPIGDAIRQMHSEWGANRLEVGMALGATVEELRDGGCSRIEMLAASPREELRHLDTREQTWQSVGPTLLEAGYSEAEAIKHLAAHAPTPSTFAVAAEAVVDDPCRAFALSVRHAQTDDLAHLAERFGMSP 688
BLAST of mRNA_P-wetherbeei_contig13669.1.1 vs. uniprot
Match: A0A524B350_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B350_9ACTN) HSP 1 Score: 399 bits (1026), Expect = 3.940e-127 Identity = 224/494 (45.34%), Postives = 293/494 (59.31%), Query Frame = 1
Query: 1 AAWRAADRVGHADGPLPTFDPIHVRGRIRWELLADTRRAAQQLVQAFSQIAEVDLSASPLPRMAVADDRTVAPGRRNYLPPADVAALPMGVWVEAGPYTAIEWAARGMPDAVGRAGFMRVSDTGYLGVYETSEGARWRIESTRPASGRRGLLDEGDASNFVAAQTEVGVVVSDRYPTLAATVLPPAVGPAPSGVFDRQHSNWRPLTLGRDERSEQRDLTDRVRLVVAPGPGGRWDSWVLADADIRQLPLAANSAAAKTAAETEGRRTIVQLAARAPQLADELIHDAAAAGTLTRELLVDVIGHRLDPADRARLA---DPAVQAADLAELLGATGVLTPLTTITVLAHEHVEADQVAALIPTIGLPIADGVRALSELWDVDRVVAGQMLGATVVELREAGCTPAEMLASHPREVLRSLDARPHTWELAAATLLESGMPVDAAVRQLAAHAPTPDAFAVAVFTIVENPIAAYAYSARHAQPDDLAALGERYGLDPD 1473
A W ADR+G A G +P FDP ++ R +W L D RRA ++ S VDL+ SP+PR + DDR VAPGRRNYL PAD+ ALP+GVW+EAGPY+ EW +RG+ A G F RV++ YL VYET +GA WR+E+T + GL+ EG A + + + +R+P A AV A W P+ RDER+ QR + DR+ VVAPGPGGRW +W D +RQ PL+A+ +AK AA+ + LA AP AD + D AA+ R +V V+GHRL DR L+ DP +L + L ATGVL P T + VL E+V D+V L+P IGL + D + ++ + W DR+ L ATV ELR AGCTP E+LA+ PRE LRSLD+R TWE +L+E+G V AV +AAHAPTP F V T+V++ A+A SAR A P+DLAAL ERYGLDP+
Sbjct: 189 AGWLVADRLGLASGAMPAFDPSNLSAREKWRTLVDVRRATGVVLDGVSHGLGVDLAQSPIPRHELVDDREVAPGRRNYLAPADLRALPIGVWIEAGPYSRAEWMSRGVAGATGVGSFFRVNERSYLAVYETRQGAMWRLETTGRGA-HHGLVYEGAADSLPEGKESARQALRERFPEFAH-----AVEAAGESRVVGASLAWMPMPGARDERTLQRVIDDRIAAVVAPGPGGRWQTWATVDGVLRQGPLSASVESAKEAADALVAGALADLATYAPDRADRFVADLAASDCWDRSKVVGVVGHRLSDHDRQSLSTTEDPV----ELVDALVATGVLAPRTILEVLRAENVPVDEVVRLVPAIGLGVPDAIASIHDGWGADRLDVAASLSATVEELRAAGCTPTELLAAAPRETLRSLDSREGTWERVGPSLVEAGYTVGEAVAHIAAHAPTPQTFVAGVVTLVDDAPTAFALSARRAGPEDLAALSERYGLDPN 672
BLAST of mRNA_P-wetherbeei_contig13669.1.1 vs. uniprot
Match: A0A539E7L7_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E7L7_9ACTN) HSP 1 Score: 146 bits (368), Expect = 2.730e-36 Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1
Query: 1 AAWRAADRVGHADGPLPTFDPIHVRGRIRWELLADTRRAAQQLVQAFSQIAEVDLSASPLPRMAVADDRTVAPGRR 228
AAW AADRVGHADGPLPTFDPIHVRGRIRWELLADTRRAAQQLVQAFSQI EVDLSASPLPRMA+A+DRTVAP RR
Sbjct: 194 AAWLAADRVGHADGPLPTFDPIHVRGRIRWELLADTRRAAQQLVQAFSQIVEVDLSASPLPRMAIANDRTVAPSRR 269 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13669.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13669.1.1 >prot_P-wetherbeei_contig13669.1.1 ID=prot_P-wetherbeei_contig13669.1.1|Name=mRNA_P-wetherbeei_contig13669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=575bp AAWRAADRVGHADGPLPTFDPIHVRGRIRWELLADTRRAAQQLVQAFSQIback to top mRNA from alignment at P-wetherbeei_contig13669:88..1812- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13669.1.1 ID=mRNA_P-wetherbeei_contig13669.1.1|Name=mRNA_P-wetherbeei_contig13669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1725bp|location=Sequence derived from alignment at P-wetherbeei_contig13669:88..1812- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13669:88..1812- >mRNA_P-wetherbeei_contig13669.1.1 ID=mRNA_P-wetherbeei_contig13669.1.1|Name=mRNA_P-wetherbeei_contig13669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1725bp|location=Sequence derived from alignment at P-wetherbeei_contig13669:88..1812- (Phaeothamnion wetherbeei SAG_119_79)back to top |