mRNA_P-wetherbeei_contig13654.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13654.1.1
Unique NamemRNA_P-wetherbeei_contig13654.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13654.1.1 vs. uniprot
Match: A0A512NQL5_9HYPH (Uncharacterized protein n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NQL5_9HYPH)

HSP 1 Score: 336 bits (862), Expect = 2.040e-113
Identity = 167/257 (64.98%), Postives = 194/257 (75.49%), Query Frame = 1
Query:   16 FKAFVGRFDAPADQATFDDLTQWVEDRYREDLKQRPSKHVYVKALPSGVVANIDRLRESQVIRDAIARRFSPHWIITPMHETDELYISHYNKDYGGDHGLFSKHYDGNLRFLPVGTVVRALIYLQSDATYKVVFHNSGVEHAFTTYEFGLLDFHRELHWVDGEYNPHDKQRIMLKCNYLVAPPNAVKLTQLLLKANTAIFFVVKASMEYSKSPKNPLQFAVGLVCNASRLLNNIHPLVPIALAATAFAAATIGLARW 786
            F A +GRFD  AD+A  D LT+WVE RYR DL +RPSKHVYV  LP   +A IDRLR+S +IR  IA R +P  +I PM  TDELYISHYNKD GGD GLF KHYDGNLRFL    VVRALIYLQSDATYKVVF +S VE AF TY+FGLLDFHRELHWV+G+YNP D+QRI+LKCNYLV P NA    +  L ANTA+F+VVKA+MEYSKSP+ P + AVG +CN  R +NN+HPL+P+AL A    AA +  A W
Sbjct:   24 FPATIGRFDDLADRAAIDKLTRWVEQRYRADLAERPSKHVYVSTLPEPAIAEIDRLRDSTLIRSLIAARVAPGSVIAPMKHTDELYISHYNKDRGGDQGLFDKHYDGNLRFLASSVVVRALIYLQSDATYKVVFDDSRVEKAFETYDFGLLDFHRELHWVEGQYNPTDRQRILLKCNYLVTPRNAAVAGRAALAANTAVFYVVKAAMEYSKSPRTPAERAVGFLCNLFRRMNNVHPLIPLALVAGVTTAA-LAAAIW 279          
BLAST of mRNA_P-wetherbeei_contig13654.1.1 vs. uniprot
Match: A0A6A7LXH0_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7LXH0_9PROT)

HSP 1 Score: 334 bits (856), Expect = 1.450e-112
Identity = 166/253 (65.61%), Postives = 192/253 (75.89%), Query Frame = 1
Query:   16 FKAFVGRFDAPADQATFDDLTQWVEDRYREDLKQRPSKHVYVKALPSGVVANIDRLRESQVIRDAIARRFSPHWIITPMHETDELYISHYNKDYGGDHGLFSKHYDGNLRFLPVGTVVRALIYLQSDATYKVVFHNSGVEHAFTTYEFGLLDFHRELHWVDGEYNPHDKQRIMLKCNYLVAPPNAVKLTQLLLKANTAIFFVVKASMEYSKSPKNPLQFAVGLVCNASRLLNNIHPLVPIALAATAFAAATIG 774
            F A VGRFDAPAD+A  D L +WVEDRY EDL +RPSKHVYV  LP+ V+A IDRLR+S +IR  IA +     +I PM  TDELY+SHYNKD GGD GLF KHYDGNLRFL    VVRALIYLQSD TYKVVF +S +E AF +YEFGLLDFHRELHWV+G+YNP D+QRI+LKCNYLV P N     ++ L ANTA+F VVK++MEYSKSP+ P QFAVG +CN  R LNNIHPL+P+   AT  AA   G
Sbjct:   24 FPATVGRFDAPADRAVIDGLVRWVEDRYAEDLAKRPSKHVYVDMLPAPVIAEIDRLRDSPLIRSLIADQVPAGSVIAPMKHTDELYLSHYNKDRGGDQGLFDKHYDGNLRFLSSSIVVRALIYLQSDTTYKVVFADSHLEKAFGSYEFGLLDFHRELHWVEGQYNPADRQRILLKCNYLVTPRNGAVAARVGLAANTAVFHVVKSAMEYSKSPRTPPQFAVGFLCNLFRRLNNIHPLLPLTFIATLLAALGYG 276          
BLAST of mRNA_P-wetherbeei_contig13654.1.1 vs. uniprot
Match: A0A259MRF3_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MRF3_9PROT)

HSP 1 Score: 315 bits (807), Expect = 4.040e-105
Identity = 163/260 (62.69%), Postives = 192/260 (73.85%), Query Frame = 1
Query:    1 APAGLFKAFVGRFDAPADQATFDDLTQWVEDRYREDLKQRPSKHVYVKALPSGVVANIDRLRESQVIRDAIARRFSPHWIITPMHETDELYISHYNKDYGGDHGLFSKHYDGNLRFLPVGTVVRALIYLQSDATYKVVFHNSGVEHAFTTYEFGLLDFHRELHWVDGEYNPHDKQRIMLKCNYLVAPPNAVKLTQLLLKANTAIFFVVKASMEYSKSPKNPLQFAVGLVCNASRLLNNIHPLVPIALAATAFAAATIGLA 780
            A + LF A +GRF+AP D+A  D L++WVE  +RE L QRPS HVYV+ LP+ +VA IDRLR+S VIR+ I R+        PM  TDELYISHYNKD GGD GLF +HYDGNLRFL    VVRALIYLQSDA+YKVVF +S VE AFTTY+FGLLDFHRELHWV+G Y P   QRI+LKCNYLV  P A    +  L ANTA+F+VVKA+MEYSKSP+ P Q AVG +CN  R LN +HPLVP+A    A AA+ IG+A
Sbjct:   16 AVSSLFPATIGRFEAPEDRALIDGLSRWVEQHFREQLGQRPSCHVYVETLPAEIVALIDRLRDSPVIRELIVRQVPAGSGFEPMKHTDELYISHYNKDRGGDQGLFDRHYDGNLRFLSSSMVVRALIYLQSDASYKVVFGDSRVEKAFTTYDFGLLDFHRELHWVEGNYTPGGPQRILLKCNYLVTAPGAGARGRFALAANTAVFYVVKAAMEYSKSPRTPAQKAVGHLCNLFRRLNIVHPLVPLA----AIAASAIGVA 271          
BLAST of mRNA_P-wetherbeei_contig13654.1.1 vs. uniprot
Match: A0A6N6ZQP0_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N6ZQP0_9PROT)

HSP 1 Score: 311 bits (796), Expect = 1.890e-103
Identity = 160/252 (63.49%), Postives = 186/252 (73.81%), Query Frame = 1
Query:   13 LFKAFVGRFDAPADQATFDDLTQWVEDRYREDLKQRPSKHVYVKALPSGVVANIDRLRESQVIRDAIARRFSPHWIITPMHETDELYISHYNKDYGGDHGLFSKHYDGNLRFLPVGTVVRALIYLQSDATYKVVFHNSGVEHAFTTYEFGLLDFHRELHWVDGEYNPHDKQRIMLKCNYLVAPPNAVKLTQLLLKANTAIFFVVKASMEYSKSPKNPLQFAVGLVCNASRLLNNIHPLVPIA-LAATAFAAA 765
            LF A +GRF+ P D+A  D L++WVE  +RE L QRPS HVY++ LP+ +VA +DRLR+S VI D I R+        PM  TDELYISHYNKD GGD GLF +HYDGNLRFL    VVRALIYLQSDA+YKVVF +S VE AFTTYEFGLLDFHRELHWV+G Y P   QRI+LKCNYLV  P A    +  L ANTA+F+VVKA+MEYSKSP+ P Q  VG +CN  R LN +HPLVP A +AATA AAA
Sbjct:   20 LFPATLGRFETPEDRALIDGLSRWVETHFREQLAQRPSCHVYIETLPAEIVALVDRLRDSPVIHDLIVRQVPAGSGFEPMKHTDELYISHYNKDRGGDQGLFDRHYDGNLRFLSSSMVVRALIYLQSDASYKVVFGDSRVEKAFTTYEFGLLDFHRELHWVEGSYTPGAPQRILLKCNYLVTVPGAGARGRFALAANTAVFYVVKAAMEYSKSPRTPAQKVVGHLCNLFRRLNIVHPLVPFAAIAATAIAAA 271          
BLAST of mRNA_P-wetherbeei_contig13654.1.1 vs. uniprot
Match: A0A521R0K3_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521R0K3_9HYPH)

HSP 1 Score: 306 bits (784), Expect = 1.260e-101
Identity = 154/242 (63.64%), Postives = 180/242 (74.38%), Query Frame = 1
Query:   13 LFKAFVGRFDAPADQATFDDLTQWVEDRYREDLKQRPSKHVYVKALPSGVVANIDRLRESQVIRDAIARRFSPHWIITPMHETDELYISHYNKDYGGDHGLFSKHYDGNLRFLPVGTVVRALIYLQSDATYKVVFHNSGVEHAFTTYEFGLLDFHRELHWVDGEYNPHDKQRIMLKCNYLVAPPNAVKLTQLLLKANTAIFFVVKASMEYSKSPKNPLQFAVGLVCNASRLLNNIHPLVPIA 738
            LF A +GRF++  D+A  D L++WVEDR+RE L +RPS HVY+  LP+ +V  IDRLR+S VIR+ I RR        PM  TDELYISHYNKD GGD GLF +HYDGNLRFL    VVRALIYLQSDA+YKVVF +S VE AFTTYEFGLLDFHRELHWV+G Y     QRI+LKCNYLV  P A    +  L ANTA+F+VVKA+MEYSKSP+ P Q AVG +CN  R LN +HPLVP+A
Sbjct:   20 LFPATIGRFESAEDRALIDGLSRWVEDRFREALAKRPSCHVYLSTLPADIVDRIDRLRDSPVIRELILRRVPAGSGFEPMKHTDELYISHYNKDRGGDQGLFDRHYDGNLRFLSSSRVVRALIYLQSDASYKVVFGDSRVEKAFTTYEFGLLDFHRELHWVEGSYTQGAPQRILLKCNYLVTAPGAGLRGRFALAANTAVFYVVKAAMEYSKSPRTPAQKAVGYLCNLFRRLNIVHPLVPLA 261          
BLAST of mRNA_P-wetherbeei_contig13654.1.1 vs. uniprot
Match: A0A2E8CGC2_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E8CGC2_9DELT)

HSP 1 Score: 253 bits (647), Expect = 7.890e-81
Identity = 122/239 (51.05%), Postives = 161/239 (67.36%), Query Frame = 1
Query:   13 LFKAFVGRFDAPADQATFDDLTQWVEDRYREDLKQRPSKHVYVKALPSGVVANIDRLRESQVIRDAIARRFSPHWIITPMHETDELYISHYNKDYGGDHGLFSKHYDGNLRFLPVGTVVRALIYLQSDATYKVVFHNSGVEHAFTTYEFGLLDFHRELHWVDGEYNPHDKQRIMLKCNYLVAPPNAVKLTQLLLKANTAIFFVVKASMEYSKSPKNPLQFAVGLVCNASRLLNNIHPLV 729
            +F+   G F+  ++Q T D+L +W   ++  +L++RPS H YVK LP  +++ ID+LR S VI++ I  +F     I P+ E DELYISH NKD GGD GLF KHYDG LRF+   TVVRALIYL S    KVVF + GV H+F TYEFGLLDFH+E HWV+G+Y+P+D  R++LK NY+V    +     ++   N  IFF+VK SMEYSKSPK PLQ  +G  CN  R +NNI P++
Sbjct:    1 MFECKKGTFEGKSEQNTVDELREWCLTQFANELRERPSLHKYVKTLPPKIISEIDKLRNSDVIKNKICEQFGGKCNIIPLDEIDELYISHVNKDKGGDQGLFEKHYDGTLRFIKGSTVVRALIYLSSSGKLKVVFSDCGVTHSFKTYEFGLLDFHKEYHWVEGDYDPNDIPRVLLKFNYMVCEGCSKLYINMMHAINVIIFFIVKYSMEYSKSPKTPLQRVIGFFCNFFREVNNISPIL 239          
BLAST of mRNA_P-wetherbeei_contig13654.1.1 vs. uniprot
Match: A0A6C0DRV6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DRV6_9ZZZZ)

HSP 1 Score: 220 bits (560), Expect = 1.260e-67
Identity = 121/269 (44.98%), Postives = 162/269 (60.22%), Query Frame = 1
Query:   13 LFKAFVGRFDAPADQATFDDLTQWVEDRYREDLKQRPSKHVYVKALPSGVVANIDRLRESQVIRDAIARRFSPHWIITPMHETDELYISHYNKDYGGDHGLFSKHYDGNLRFLPVGTVVRALIYLQSDATYKVVFHNSGVEHAFTTYEFGLLDFHRELHWVDGEYNPH---DKQRIMLKCNYLVAPPNAVKLTQLLLKANTAIFFVVKASMEYSKSPKNPLQFAVGLVCNASRLLNNIH-------PLVPIALAATAFAAATIGLARWL 789
            LFK  +G      D  + DD+  +V   + E+LK RPS H YV  LP      + ++R+S  IR+AI +++  H  ITP+ ETDELY+SHYN D GGD GLF+KHYDG LR L   TV RAL+Y+ S   + V F ++G+ H F T EFGLLDF+RE HWV+G+YN +      RI+LK NYLV P  +V   + ++  N  +F +VK +MEYSKSPK P Q+ +G  CN  R+ NNI         LV IA+   A     +G +R L
Sbjct:    6 LFKTTIGTLP---DTKSVDDVRNFVFTHFNEELKARPSFHKYVTKLPQNFQEMVSKIRDSPTIREAICKQYE-HCDITPLPETDELYVSHYNIDGGGDQGLFNKHYDGVLRLLDDATVARALVYVNSKDDFVVHFLDTGISHNFKTNEFGLLDFNREYHWVEGKYNENMDMKDTRILLKINYLVCPKCSVAYAKFVIWLNWTVFLIVKTAMEYSKSPKTPFQYFIGFFCNLYRVANNISVWMSILLTLVLIAITGLALYGTALGASRLL 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13654.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A512NQL5_9HYPH2.040e-11364.98Uncharacterized protein n=1 Tax=Reyranella soli Ta... [more]
A0A6A7LXH0_9PROT1.450e-11265.61Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A259MRF3_9PROT4.040e-10562.69Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A6N6ZQP0_9PROT1.890e-10363.49Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A521R0K3_9HYPH1.260e-10163.64Uncharacterized protein n=1 Tax=Reyranella sp. Tax... [more]
A0A2E8CGC2_9DELT7.890e-8151.05Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A6C0DRV6_9ZZZZ1.260e-6744.98Uncharacterized protein n=1 Tax=viral metagenome T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13654contigP-wetherbeei_contig13654:243..1037 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog55529.EKX46924
PFAMsPEMT
Model size795
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.06e-05
EggNOG OGs28Q2P@1|root,2QWRE@2759|Eukaryota
DescriptionPhospholipid methyltransferase
Cds size795
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185994.125227-CDS-P-wetherbeei_contig13654:242..10371683185994.125227-CDS-P-wetherbeei_contig13654:242..1037Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13654 243..1037 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13654.1.1prot_P-wetherbeei_contig13654.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13654 243..1037 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13654.1.1

>prot_P-wetherbeei_contig13654.1.1 ID=prot_P-wetherbeei_contig13654.1.1|Name=mRNA_P-wetherbeei_contig13654.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=265bp
APAGLFKAFVGRFDAPADQATFDDLTQWVEDRYREDLKQRPSKHVYVKAL
PSGVVANIDRLRESQVIRDAIARRFSPHWIITPMHETDELYISHYNKDYG
GDHGLFSKHYDGNLRFLPVGTVVRALIYLQSDATYKVVFHNSGVEHAFTT
YEFGLLDFHRELHWVDGEYNPHDKQRIMLKCNYLVAPPNAVKLTQLLLKA
NTAIFFVVKASMEYSKSPKNPLQFAVGLVCNASRLLNNIHPLVPIALAAT
AFAAATIGLARWLL*
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mRNA from alignment at P-wetherbeei_contig13654:243..1037-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13654.1.1 ID=mRNA_P-wetherbeei_contig13654.1.1|Name=mRNA_P-wetherbeei_contig13654.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig13654:243..1037- (Phaeothamnion wetherbeei SAG_119_79)
GCTCCGGCCGGACTGTTCAAGGCGTTCGTCGGCCGCTTCGACGCGCCGGC AGATCAAGCCACCTTCGACGATCTCACGCAGTGGGTCGAAGACCGGTATC GCGAGGACTTGAAGCAGCGCCCTTCCAAGCACGTCTATGTGAAGGCGCTT CCCTCCGGAGTCGTCGCGAACATCGACCGCCTGCGCGAAAGCCAGGTCAT TCGCGACGCCATTGCGCGCCGCTTCAGTCCGCATTGGATCATCACGCCGA TGCACGAGACCGACGAGCTTTATATATCGCACTACAACAAGGACTATGGT GGCGATCACGGATTGTTCAGCAAGCACTACGACGGCAATCTCCGTTTCCT GCCAGTCGGAACAGTGGTGCGCGCCCTGATCTATCTGCAGTCCGATGCCA CCTACAAGGTTGTATTTCACAACAGCGGCGTCGAGCATGCCTTCACGACG TACGAGTTCGGCCTGCTCGACTTTCATCGGGAGTTGCACTGGGTCGATGG CGAGTATAATCCGCACGACAAGCAGCGCATCATGCTGAAGTGCAACTATC TCGTTGCGCCGCCCAATGCGGTCAAGCTGACGCAACTGCTGTTGAAGGCC AATACGGCAATATTCTTCGTGGTCAAGGCCTCGATGGAGTATTCGAAGAG CCCGAAGAATCCGCTGCAATTTGCCGTAGGGCTCGTTTGCAACGCCTCTC GCCTCCTGAACAACATCCACCCACTCGTTCCGATCGCGCTTGCGGCAACT GCATTTGCTGCCGCAACGATCGGATTAGCTCGGTGGTTGCTGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13654:243..1037-

>mRNA_P-wetherbeei_contig13654.1.1 ID=mRNA_P-wetherbeei_contig13654.1.1|Name=mRNA_P-wetherbeei_contig13654.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig13654:243..1037- (Phaeothamnion wetherbeei SAG_119_79)
GCTCCGGCCGGACTGTTCAAGGCGTTCGTCGGCCGCTTCGACGCGCCGGC
AGATCAAGCCACCTTCGACGATCTCACGCAGTGGGTCGAAGACCGGTATC
GCGAGGACTTGAAGCAGCGCCCTTCCAAGCACGTCTATGTGAAGGCGCTT
CCCTCCGGAGTCGTCGCGAACATCGACCGCCTGCGCGAAAGCCAGGTCAT
TCGCGACGCCATTGCGCGCCGCTTCAGTCCGCATTGGATCATCACGCCGA
TGCACGAGACCGACGAGCTTTATATATCGCACTACAACAAGGACTATGGT
GGCGATCACGGATTGTTCAGCAAGCACTACGACGGCAATCTCCGTTTCCT
GCCAGTCGGAACAGTGGTGCGCGCCCTGATCTATCTGCAGTCCGATGCCA
CCTACAAGGTTGTATTTCACAACAGCGGCGTCGAGCATGCCTTCACGACG
TACGAGTTCGGCCTGCTCGACTTTCATCGGGAGTTGCACTGGGTCGATGG
CGAGTATAATCCGCACGACAAGCAGCGCATCATGCTGAAGTGCAACTATC
TCGTTGCGCCGCCCAATGCGGTCAAGCTGACGCAACTGCTGTTGAAGGCC
AATACGGCAATATTCTTCGTGGTCAAGGCCTCGATGGAGTATTCGAAGAG
CCCGAAGAATCCGCTGCAATTTGCCGTAGGGCTCGTTTGCAACGCCTCTC
GCCTCCTGAACAACATCCACCCACTCGTTCCGATCGCGCTTGCGGCAACT
GCATTTGCTGCCGCAACGATCGGATTAGCTCGGTGGTTGCTGTAG
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