mRNA_P-wetherbeei_contig1361.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1361.6.1
Unique NamemRNA_P-wetherbeei_contig1361.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: A0A835YX01_9STRA (Acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX01_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.260e-63
Identity = 100/149 (67.11%), Postives = 125/149 (83.89%), Query Frame = 1
Query:    4 KCILKYHEFEAVMEISDAELDKLSETRRFIFAAQPHGVMSVVGICYAVYYAPKRIPPTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRDSVVVYVGGIAELFLSSATEERLYAARK-GFVKLALQTGSDVIPLFFFGNTTALEV 447
            KC LKYHEFE + E +D EL +LS+TR FI AAQPHGVMSV GICYA+  AP  IPP+AVASVLL++P++K VFG+F+L+DASR+SLTK LK+ SVV+YVGG+AELFLS  +EERL+ A++ GF+KLA+QTGSDVIP + FGNT+ L V
Sbjct:  100 KCALKYHEFEEIQETTDEELHELSKTRNFIMAAQPHGVMSVAGICYAINRAPGEIPPSAVASVLLRIPLMKQVFGSFNLIDASRKSLTKALKKQSVVIYVGGMAELFLSHPSEERLFIAKRTGFLKLAMQTGSDVIPWYLFGNTSTLVV 248          
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: D8LD78_ECTSI (Acyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD78_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.150e-55
Identity = 89/149 (59.73%), Postives = 113/149 (75.84%), Query Frame = 1
Query:    4 KCILKYHEFEAVMEISDAELDKLSETRRFIFAAQPHGVMSVVGICYAVYYAPKRIPPTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRDSVVVYVGGIAELFLSSATEERLYAA-RKGFVKLALQTGSDVIPLFFFGNTTALEV 447
            +C LKYH+F+ V E S  E+  + + ++ IFAAQPHGVMS+ GIC A+  AP+  PPT  A V+ ++PI+KHVFG F LV AS RSL   L+R SVV+YVGGIAELFLS+  EERLY   RKGF+KLA+QTGS+VIP ++FGNTT LE+
Sbjct:   79 RCALKYHDFDEVEETSQEEISLIEKDKKIIFAAQPHGVMSITGICSAINMAPRPTPPTCTADVIRRIPIMKHVFGVFGLVGASSRSLKSALRRTSVVLYVGGIAELFLSNPAEERLYVGKRKGFIKLAMQTGSEVIPCYYFGNTTCLEI 227          
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: A0A7S2PH91_9STRA (Acyltransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PH91_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.470e-38
Identity = 80/158 (50.63%), Postives = 108/158 (68.35%), Query Frame = 1
Query:    1 MKCILKYHEFEAVMEISDAE-LDKL--SETRRFIFAAQPHGVMSVVGICYAVYYAPKRIP-PTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRDS----VVVYVGGIAELFLSSATEERLYAA-RKGFVKLALQTGSDVIPLFFFGNTTALEV 447
            ++ +L++ E++ + E SD E LD +   + ++ +F  QPHGV+S  G C  +   PK  P PTAVAS LL  PILKHV G ++L DAS ++L KV KRD     VV+YVGGIAELF  S TEERLY + RKGF+K+AL+ G ++IP +FFGNT+ L V
Sbjct:  111 LRPMLEFFEYDFIGETSDGEILDSIFSGKKKKVMFVCQPHGVLSFGGFCSKIAMPPKFYPMPTAVASSLLTTPILKHVIGMWNLTDASSKNLRKVFKRDGTAGCVVLYVGGIAELFRCSQTEERLYLSKRKGFIKIALREGVEIIPAYFFGNTSVLSV 268          
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: A0A7S2W5Y2_9STRA (Acyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5Y2_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.460e-37
Identity = 80/159 (50.31%), Postives = 110/159 (69.18%), Query Frame = 1
Query:    1 MKCILKYHEFEAVMEISDAELDKLSETRR-FIFAAQPHGVMSVVGICYAV--YYAPKRIP-----PTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVL--KRDSVVVYVGGIAELFLSSATEERLYAARKGFVKLALQTGSDVIPLFFFGNTTALEV 447
            M+ + KY ++  V+E +D EL   S  R+  I A QPHGV S  G+C A+  Y A +R       PTAVASV++  P+LKHV G F L+DAS++SL K L  K+ +VV+YVGGIAELFL S TEE++ A RKGF+K+A+Q G+D++P++  GNTT L+V
Sbjct:   97 MRQMPKYFQYSEVLESTDRELIDYSAKRKPLILAVQPHGVFSYGGVCSALIDYGASERAEVVARFPTAVASVVMGFPVLKHVLGVFGLLDASKKSLMKQLSGKKGNVVLYVGGIAELFLCSPTEEKVLA-RKGFIKVAMQAGADIVPVYLLGNTTVLQV 254          
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: A0A7S2GUY3_9STRA (Acyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GUY3_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.540e-37
Identity = 79/155 (50.97%), Postives = 104/155 (67.10%), Query Frame = 1
Query:    1 MKCILKYHEFEAVMEISDAELDKLSET-RRFIFAAQPHGVMSVVGICYAVYYAPKRIPPTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRDSV----VVYVGGIAELFLSSATEERLYAA-RKGFVKLALQTGSDVIPLFFFGNTTALEV 447
            M+ ++ Y ++E   E SD EL + ++  + FIFA QPHGV+S  GIC A+        PTA AS +L  PI+K+V G F+L+DAS  S+ K LKRD V    V+YVGGIAELF SS  EERLY + RKGF+K+AL+ G DV+P + FGNT+ L V
Sbjct:  121 MEPMVDYFDYEEEFECSDEELREHAKNGKSFIFATQPHGVISFCGICAAISAPVDNKVPTAAASAVLHTPIIKNVMGIFNLIDASSSSIRKHLKRDGVEGCLVLYVGGIAELFKSSRKEERLYLSKRKGFIKIALREGVDVVPSYMFGNTSVLTV 275          
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: A0A7S2Q253_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q253_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.000e-36
Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 1
Query:    1 MKCILKYHEFEAVMEISDAELDKLSETRRFIFAAQPHGVMSVVGICYAVYYAPKRIP-PTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRD-SVVVYVGGIAELFLSSATEERLYAA-RKGFVKLALQTGSDVIPLFFFGNTTALE 444
            +K +L Y ++EA+          ++  + F+FAAQPHG++S VG+C AV      +  PTA AS +L+ P+LK++ G F+LVDAS  +L K+LK   SV++Y+GGIAELF S   EERLY   RKGF+KLAL+ G DV+P++ FGNT+ L 
Sbjct:   80 LKPMLYYFDYEAIYTDDKNVRQAIAGGKNFLFAAQPHGILSFVGMCAAVSKPDDAMKVPTAAASAVLQTPLLKNLMGIFNLVDASAHNLKKILKGGGSVLIYIGGIAELFKSCRAEERLYLKKRKGFIKLALREGVDVVPIYLFGNTSVLS 230          
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: A0A7S2CLT2_9STRA (Acyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLT2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 5.970e-36
Identity = 78/154 (50.65%), Postives = 102/154 (66.23%), Query Frame = 1
Query:   10 ILKYHEFEAVMEISDAELDKLSETRRFIFAAQPHGVMSVVGICYAVYYAPKRIP-------PTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRD-SVVVYVGGIAELFLSSATEERLYAARKGFVKLALQTGSDVIPLFFFGNTTALEV 447
            I KY ++  ++E SD E  K    +  I A QPHGV S  G+C AV     +I        PTAVA+VLL +PILKH+ G F LVDA ++SL   +K+  S V+YVGGIAELFLSS  +E +  +R+GF+KLA+Q G+DVIPL+ FGNTT L+V
Sbjct:  101 IPKYFDYVEILEYSDEETAK--HAKPLILAVQPHGVFSYGGVCSAVVDYSSKIRMEIVHMFPTAVAAVLLSLPILKHILGVFGLVDAGKQSLVNRIKKGKSTVLYVGGIAELFLSSPEKEAI-KSRRGFIKLAIQQGADVIPLYLFGNTTVLKV 251          
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: A0A812R5N3_SYMMI (DGAT2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R5N3_SYMMI)

HSP 1 Score: 132 bits (331), Expect = 1.340e-35
Identity = 78/158 (49.37%), Postives = 104/158 (65.82%), Query Frame = 1
Query:   10 ILKYHEFEAVMEISD----AELDKLS-ETRRFIFAAQPHGVMSVVGICYAVYYAPKRIPP--TAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRD----SVVVYVGGIAELFLSSATEERLYA-ARKGFVKLALQTGSDVIPLFFFGNTTALEV 447
            +L Y +FE   E SD    A L++L  E R  IFA QPHGV+S  G+C  +  A  R     TA A  +L  P++KHV G + L+DAS +SLT+ L R     SVV+Y GGIAELF +S TEE L+  +RKGF+KLAL+TG+D++P++FFGNT+ L V
Sbjct:    1 MLDYFDFETAFETSDDDLVARLEELKKEGRSMIFAGQPHGVLSFGGLCAGIA-ADSRFTDLVTAAAGAVLATPVVKHVVGIYGLIDASAKSLTRRLARGGAQGSVVLYTGGIAELFKTSDTEEILFINSRKGFIKLALRTGADIVPMYFFGNTSVLSV 157          
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: A0A7S2E5F0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E5F0_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.160e-35
Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = 1
Query:   82 RRFIFAAQPHGVMSVVGICYAVYYAPKRIPPTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRDSV----VVYVGGIAELFLSSATEERLYAA-RKGFVKLALQTGSDVIPLFFFGNTTALEV 447
            + FIFA QPHGV+S  GIC A+        PTA AS +L  PI+K+V G F+L+DAS  S+ K LKRD V    V+YVGGIAELF SS  EERLY + RKGF+K+AL+ G DV+P + FGNT+ L V
Sbjct:    8 KSFIFATQPHGVISFCGICAAISAPVDNKVPTAAASAVLHTPIIKNVMGIFNLIDASSSSIRKHLKRDGVEGCLVLYVGGIAELFKSSRKEERLYLSKRKGFIKIALREGVDVVPSYMFGNTSVLTV 134          
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Match: A0A6U2DDA3_9STRA (Acyltransferase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2DDA3_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.530e-35
Identity = 80/154 (51.95%), Postives = 103/154 (66.88%), Query Frame = 1
Query:   10 ILKYHEFEAVMEISDAELDKLS-ETRRFIFAAQPHGVMSVVGICYAVYYAPK--RIPPTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRD----SVVVYVGGIAELFLSSATEERLYAA-RKGFVKLALQTGSDVIPLFFFGNTTALEV 447
            IL Y ++E   EI+D E  K   E +R+I A QPHGV++ VGIC A   AP   R   TAVAS +L+ PILK+V G F L DAS R++   LK+     SV++YVGGIAELF SS  +ERLY + RKGFVK+AL+ G D++P + FGNT+ L V
Sbjct:   89 ILDYFDYEEAFEITDEEFRKNGKEGKRYIVACQPHGVITFVGIC-AWVSAPDDFRKIKTAVASAVLQTPILKNVMGIFGLTDASARNIKNRLKKQGVDGSVIIYVGGIAELFKSSRKQERLYLSNRKGFVKIALREGVDIVPCYLFGNTSVLTV 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1361.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YX01_9STRA3.260e-6367.11Acyltransferase n=1 Tax=Tribonema minus TaxID=3033... [more]
D8LD78_ECTSI1.150e-5559.73Acyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A7S2PH91_9STRA2.470e-3850.63Acyltransferase n=1 Tax=Leptocylindrus danicus Tax... [more]
A0A7S2W5Y2_9STRA1.460e-3750.31Acyltransferase n=1 Tax=Rhizochromulina marina Tax... [more]
A0A7S2GUY3_9STRA1.540e-3750.97Acyltransferase n=1 Tax=Helicotheca tamesis TaxID=... [more]
A0A7S2Q253_9STRA5.000e-3647.68Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2CLT2_9STRA5.970e-3650.65Acyltransferase n=1 Tax=Dictyocha speculum TaxID=3... [more]
A0A812R5N3_SYMMI1.340e-3549.37DGAT2 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S2E5F0_9STRA2.160e-3555.91Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6U2DDA3_9STRA3.530e-3551.95Acyltransferase n=1 Tax=Pseudictyota dubia TaxID=2... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1361contigP-wetherbeei_contig1361:6202..7243 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LD78
PFAMsDAGAT
Model size450
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.89e-56
EggNOG OGsKOG0831@1|root,KOG0831@2759|Eukaryota
Ec32 ortholog descriptionmono-or diacylglycerol acyltransferase type 2
Ec32 orthologEc-05_001450.1
Description2-acylglycerol O-acyltransferase activity
Cds size450
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185992.4103906-CDS-P-wetherbeei_contig1361:6201..63061683185992.4103906-CDS-P-wetherbeei_contig1361:6201..6306Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1361 6202..6306 +
1683185992.4200819-CDS-P-wetherbeei_contig1361:6532..66971683185992.4200819-CDS-P-wetherbeei_contig1361:6532..6697Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1361 6533..6697 +
1683185992.4285393-CDS-P-wetherbeei_contig1361:7063..72431683185992.4285393-CDS-P-wetherbeei_contig1361:7063..7243Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1361 7064..7243 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1361.6.1prot_P-wetherbeei_contig1361.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1361 6202..7243 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1361.6.1

>prot_P-wetherbeei_contig1361.6.1 ID=prot_P-wetherbeei_contig1361.6.1|Name=mRNA_P-wetherbeei_contig1361.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp
MKCILKYHEFEAVMEISDAELDKLSETRRFIFAAQPHGVMSVVGICYAVY
YAPKRIPPTAVASVLLKVPILKHVFGTFHLVDASRRSLTKVLKRDSVVVY
VGGIAELFLSSATEERLYAARKGFVKLALQTGSDVIPLFFFGNTTALEV*
back to top

mRNA from alignment at P-wetherbeei_contig1361:6202..7243+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1361.6.1 ID=mRNA_P-wetherbeei_contig1361.6.1|Name=mRNA_P-wetherbeei_contig1361.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1042bp|location=Sequence derived from alignment at P-wetherbeei_contig1361:6202..7243+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGTGCATACTGAAGTACCACGAGTTCGAAGCGGTGATGGAAATCTC CGACGCGGAGCTCGACAAGCTCAGCGAGACGCGCCGCTTCATCTTCGCCG CGCAGGTAAGAACCAAATTTCTTCAAGTAAAGCAACAGTACAGTAAATAA CACTGAACTTGCTCTTTCGCGGTTGCAGTCGATCGCGACAGCGTTCGGTT TTCCTGCTTGCGTCCTTCCTCTTGATTGAGCAAGGCCTCGCTGATCGCTA CTCCTGTCATGCACGCCCGCCGCTGCGCCCATCACGTCCGCTACCGCCGT CCATGCACCGCCCCTGCCTGCAACAACGCAGCCGCACGGCGTGATGAGCG TGGTGGGCATATGCTACGCCGTCTACTACGCGCCGAAGCGCATCCCGCCG ACGGCTGTCGCCAGCGTGCTGCTCAAGGTGCCCATCTTGAAGCATGTCTT CGGCACGTTTCACCTCGTCGACGCGTCACGCCGCTCCCTCACCAAGGTGC GTTTTGCCATTTTGGGGCAGCGGGGGGTGCGGCAGTTACAGAAATGCGGA AGGAAGAAGAAGCTGGAGTGTGAAGAGGGGGATTGGGGAGAACAGCAAGC TGGCAACCTAGCTACCTGGGGCGGCGTGACATCGTTTTTCGGGAGGGGGT TTCAGAGAGCGAGCAAGTATTTCCTTTCTCCTTCCTCTCTTGCTTTTCAT ACGAAAATTACCCCTCAGTCGCGCTCTCCCTCGACGTGTGGGATGGAAAC AGCCTTTTTCCTCCTTCTTCACTGGCATTCCACGGCAGTCGCCCCCTCAT CGCACTATTTTCTCTCTCTTCCGGCGCTCTCTCTCTCTCCGCGGCGTCGG AGCGGAGAGCAGGTGCTGAAGAGGGACAGCGTGGTGGTGTACGTGGGGGG CATTGCCGAGCTCTTTTTGTCGTCGGCGACGGAGGAGCGGCTCTACGCCG CCCGGAAAGGCTTTGTGAAGCTGGCACTACAGACGGGGAGTGATGTGATT CCGCTCTTCTTTTTCGGCAACACCACCGCCCTCGAGGTGTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1361:6202..7243+

>mRNA_P-wetherbeei_contig1361.6.1 ID=mRNA_P-wetherbeei_contig1361.6.1|Name=mRNA_P-wetherbeei_contig1361.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig1361:6202..7243+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGTGCATACTGAAGTACCACGAGTTCGAAGCGGTGATGGAAATCTC
CGACGCGGAGCTCGACAAGCTCAGCGAGACGCGCCGCTTCATCTTCGCCG
CGCAGCCGCACGGCGTGATGAGCGTGGTGGGCATATGCTACGCCGTCTAC
TACGCGCCGAAGCGCATCCCGCCGACGGCTGTCGCCAGCGTGCTGCTCAA
GGTGCCCATCTTGAAGCATGTCTTCGGCACGTTTCACCTCGTCGACGCGT
CACGCCGCTCCCTCACCAAGGTGCTGAAGAGGGACAGCGTGGTGGTGTAC
GTGGGGGGCATTGCCGAGCTCTTTTTGTCGTCGGCGACGGAGGAGCGGCT
CTACGCCGCCCGGAAAGGCTTTGTGAAGCTGGCACTACAGACGGGGAGTG
ATGTGATTCCGCTCTTCTTTTTCGGCAACACCACCGCCCTCGAGGTGTAG
back to top