mRNA_P-wetherbeei_contig13591.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13591.2.1
Unique NamemRNA_P-wetherbeei_contig13591.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: A0A7C4XZ27_9HYPH (Lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XZ27_9HYPH)

HSP 1 Score: 449 bits (1154), Expect = 1.890e-153
Identity = 236/386 (61.14%), Postives = 286/386 (74.09%), Query Frame = 1
Query:   55 SRPLRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQGLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHA 1212
            +R +RLF++AGE SGD LGAKLMAAL  AH   + FAGVGGE M   GL SLF ++EVAVMGPL+ILKRLP I RR++QT DA +   PDAIVIID+PEFTH IA+R+RR+RP+IPIIDYVSPTVW WRPGRARAMR YVDH+LAL PFEP  H RLGGPPCTYVGHPL ER E + ALDPA L GRLGL P   VL+VLPGSR SEV  L+ PF +    LA  G  P +++PVV  ++  +A +   W G  HL+EG+DDK+ +F+LA AALAASGTVTLEL +A  PMV+AY+V+P    ++R ++ V    L NL++ E   PEF+QE CTP+ALA A+  LLSDTP R RQL ALA +P +L   S  PS+AAA IVL +A
Sbjct:   20 ARSIRLFMVAGEQSGDTLGAKLMAALAAAHAGRVWFAGVGGEQMAAAGLRSLFPVAEVAVMGPLSILKRLPRIARRIFQTADAAVKAAPDAIVIIDSPEFTHPIARRIRRRRPDIPIIDYVSPTVWAWRPGRARAMRSYVDHVLALLPFEPEVHARLGGPPCTYVGHPLIERAEWLAALDPAPLAGRLGLAPGEPVLVVLPGSRSSEVSRLMGPFAETIGRLAARGLSPRVLLPVVPHLKGEVAQAASAWTGPVHLIEGEDDKFRAFKLARAALAASGTVTLELGLARVPMVVAYRVDP-IASLVRYLLCVDTVVLANLVLGERAIPEFLQENCTPDALAGALAPLLSDTPARARQLEALARMPGKLLLASGTPSEAAAEIVLDYA 404          
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: A0A2W4LC30_9PROT (Lipid-A-disaccharide synthase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4LC30_9PROT)

HSP 1 Score: 446 bits (1146), Expect = 1.550e-152
Identity = 239/385 (62.08%), Postives = 291/385 (75.58%), Query Frame = 1
Query:   58 RPLRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQGLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHA 1212
            +PL +FL+AGE SGDALGA LMAAL    G  + F+GVGG LME  GL SLF +S+VAVMGPL+IL RLP IVRRV++T+DA +A  PD +VIID+PEFTHAIAKRVRR+ P IPIIDYVSP+VW WRPGRA+ MR ++DH+LAL PFEP AH+RLGGP CTYVGHPL ER E +  LDP  L  RLGL   R VLLVLPGSR SEVG L++PF +A   + + G  P+IIIP V  VR +I  +L  WP +PHL+EG++DK+ SF+LA AALAASGTVTLELA+ GTP V+AYKV+   G  LR +VKV    L NL++ E ++PEF+QE C+PE LA AV  LL++T +R+RQL  LA IP R+A P   PSDAAA IVL +A
Sbjct:    6 KPLHIFLVAGEQSGDALGASLMAALQARLGERVVFSGVGGALMETCGLESLFPLSDVAVMGPLSILPRLPRIVRRVHRTVDAAVAAQPDVVVIIDSPEFTHAIAKRVRRRCPGIPIIDYVSPSVWAWRPGRAKRMRGHIDHVLALLPFEPEAHQRLGGPACTYVGHPLIERCEWLDQLDPLPLAERLGLQTDRPVLLVLPGSRSSEVGRLMQPFGEAVRRILDSGVAPQIIIPAVPHVRGLIEKALADWPVRPHLIEGEEDKFRSFKLATAALAASGTVTLELALCGTPAVVAYKVDAIAGS-LRFLVKVPSIVLANLVLGENVYPEFIQENCSPENLANAVLPLLTETSERRRQLELLAKIPERMAVPGK-PSDAAAEIVLKYA 388          
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: A0A2W4RS04_9PROT (Lipid-A-disaccharide synthase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RS04_9PROT)

HSP 1 Score: 441 bits (1134), Expect = 1.100e-150
Identity = 229/385 (59.48%), Postives = 291/385 (75.58%), Query Frame = 1
Query:   58 RPLRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQGLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHA 1212
            +PL +FL+AGE SGDALGA LM+AL      ++ F+GVGG  M  +GL SLF +S+VAVMGPL+IL+RLP I+ RVY T+DA +A  PD +VIID+PEFTHAIAKR+RR+ P IPI+DYVSPTVW WRPGRA+ MR YVDH+LAL PFEP AH +LGGPPCTYVGHPL ER E + +L+P  L  RL L+  + +L+VLPGSR SEV  L++PF +A   L   G + ++IIP V  +R +I  ++ +WP +PHLVEGD+DK+ +F+LA AALAASGTVTLELA+ GTP V+AY+V+P     LR +VKV    L NL++ E ++PEF+QE CTPE LAAAV  LLS TP+R+RQL  LA IP RLA  +S PSDAAA I++ +A
Sbjct:    6 KPLHIFLVAGEQSGDALGASLMSALQAKLDQSVVFSGVGGAQMGARGLKSLFPLSDVAVMGPLSILRRLPRIISRVYATVDAAVAERPDVVVIIDSPEFTHAIAKRIRRRCPAIPIVDYVSPTVWAWRPGRAKRMRRYVDHVLALLPFEPEAHRKLGGPPCTYVGHPLIERREWLESLNPTPLAERLELERDQPILVVLPGSRSSEVERLMQPFGEAVRLLHARGLVRQVIIPAVPHLRSVIEQAVGEWPVRPHLVEGDEDKFSAFKLATAALAASGTVTLELALVGTPAVVAYRVDP-IAARLRFLVKVPSIVLANLVLGENVYPEFVQEDCTPEKLAAAVAPLLSTTPERRRQLDLLARIPERLAVEASKPSDAAADIIIQYA 389          
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: UPI00093100A6 (lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI00093100A6)

HSP 1 Score: 439 bits (1129), Expect = 8.290e-150
Identity = 234/394 (59.39%), Postives = 289/394 (73.35%), Query Frame = 1
Query:   37 NAATNVSRPLRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQGL-VSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHAL 1215
            NA +  +  +RLFL+AGEHSGDALGAKL+AAL    G  +  AGVGG  ME +G+  S F MS+VAVMGPL+IL+ LP I+RRVY T+D+ L   P A+VIID+PEFTH IAKR+R++RPEIPIIDYVSP+VW WRPGRAR MRPYVDH+L + PFEP AH RLGGPPC+YVGH L ERL+ +R LD   LR RLGL+P R V++VLPGSR SEVG L+EPF      L E G  PE+++P V  VR MI      WP   H+VEG++DK+ +F+LA AALAASGTVTLELA+AG PMV+AY+V+P     LRR++K     L NL++ E  FPEF QE  +PE LA A+  LLSDTP+R+ QL ALA +P  +   S +PS+AAA IVL +AL
Sbjct:    3 NAESAAAEEVRLFLVAGEHSGDALGAKLIAALRNRLGDRLRLAGVGGAGMEAEGVFASDFPMSDVAVMGPLSILRHLPRIMRRVYATVDSALRCDPHAVVIIDSPEFTHPIAKRIRKRRPEIPIIDYVSPSVWAWRPGRARKMRPYVDHILGILPFEPEAHVRLGGPPCSYVGHSLIERLDWLRELDAEPLRTRLGLNPARPVVVVLPGSRSSEVGRLIEPFGDTLRRLIERGVEPEVVVPCVPHVRAMIERGRRTWPVPAHIVEGEEDKFRAFKLASAALAASGTVTLELALAGVPMVVAYRVDPIAAPFLRRLIKAPTTVLANLVLGENAFPEFHQEKSSPENLAGALAPLLSDTPERRAQLAALARVPDLMHIESGSPSEAAADIVLDYAL 396          
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: UPI000367DDBC (lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI000367DDBC)

HSP 1 Score: 439 bits (1128), Expect = 1.350e-149
Identity = 234/394 (59.39%), Postives = 286/394 (72.59%), Query Frame = 1
Query:   46 TNVSRP---LRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQ-GLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHAL 1215
            T  SRP   +R+FLIAGEHSGDALGAKL+ AL    G  +  AGVGGE ME + G VS F MS+VAVMGPL+IL+ LP IVRRVY  +D+ L   PDA+VIID+PEFTH IAKR+R+ RP+IPI+DYVSP+VW WRPGRA  MRPYVDH+L + PFEPAAH+RLGGPPC+YVGH   ERL+ +R LDP  LR RLGLDP + V++ LPGSR SEVG L+EPF      L E G  PE+I+P V+ VR ++      WP   H+VE  DDK+ +F+LA AALAASGTVTLELA+AGTPMV+AY+V+P     LRRM+K     L NL++ E  FPEF QE  +P  LA A+  LLSDTP+R+ QL ALA +P  +     +PS+AAA IVL +AL
Sbjct:    6 TGESRPTGEVRIFLIAGEHSGDALGAKLIDALRTRLGDRLVLAGVGGEAMEQRRGFVSGFPMSDVAVMGPLSILRHLPRIVRRVYAAVDSALRFEPDAVVIIDSPEFTHPIAKRIRKARPDIPIVDYVSPSVWAWRPGRAAKMRPYVDHILGILPFEPAAHKRLGGPPCSYVGHSFIERLDWLRDLDPEPLRARLGLDPEKPVIVALPGSRTSEVGRLMEPFGDTLRLLCERGKAPEVIVPCVAHVRGLVEKGRASWPVAAHIVEDPDDKYRAFKLAKAALAASGTVTLELALAGTPMVVAYRVDPVAAPFLRRMIKAPTTVLANLVLGENAFPEFHQEKSSPRNLADALEPLLSDTPERRAQLAALARVPHLMHIEGGSPSEAAADIVLDYAL 399          
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: UPI00156F8198 (Lipid-A-disaccharide synthase n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=UPI00156F8198)

HSP 1 Score: 437 bits (1124), Expect = 6.480e-149
Identity = 233/383 (60.84%), Postives = 277/383 (72.32%), Query Frame = 1
Query:   64 LRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQGLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHA 1212
            LR+FL+AGEHSGDALG KLM AL       + + GVGGE ME  GL S F +S+VAVMGPL IL RLP +V RVY+T+DA +A  PDA+VIIDAPEFTH IAKR+R++ P IPIIDYVSP+VW WR GRAR MRPYVDH+LAL PFEPAAHERLGGPPC+YVGHPL ERLE I+ LDP  L  RL LDP R V++VLPGSR SEV  L++PF      L      P+IIIP V  VR +I      W   PH VEGD+DK+ +FRLA AALAASGTVTLELA+AGTPMV+ YKV+      L+ +VKV    L NL+++E  FPE++QE CTPE +A A+  LL DTP+ + QL ALA IP R+    + PSD AA IVL +A
Sbjct:   23 LRIFLVAGEHSGDALGGKLMTALTARCNGRVHYLGVGGETMEHAGLASQFPLSDVAVMGPLNILARLPRLVSRVYRTVDAAVAAEPDAVVIIDAPEFTHPIAKRIRKRAPSIPIIDYVSPSVWAWRSGRARKMRPYVDHVLALLPFEPAAHERLGGPPCSYVGHPLIERLEWIQGLDPTALAERLQLDPARPVIVVLPGSRTSEVTRLMQPFGATIEELHNRRLRPQIIIPAVPHVRAIIQQHAQTWREPPHFVEGDEDKFRAFRLAHAALAASGTVTLELALAGTPMVVGYKVDR-LAAQLKHLVKVHSVVLANLVLEENAFPEYLQENCTPEKMADAIEPLLRDTPESRAQLAALARIPHRMLIEGATPSDLAADIVLDYA 404          
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: A0A6I3KI56_9HYPH (Lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KI56_9HYPH)

HSP 1 Score: 436 bits (1122), Expect = 1.490e-148
Identity = 232/384 (60.42%), Postives = 286/384 (74.48%), Query Frame = 1
Query:   64 LRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQGLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHAL 1215
            LR+FL+AGEHSGDALG KLM+AL       I + GVGGE ME  GL S F +S+VAVMGPL+IL RLP I+ RVY+T+D+ +A  PDA+VIIDAPEFTH IAKR+R++ P IPIIDYVSP+VW WRPGRAR MRPYVDH++ L PFEPAAH+RLGGPPCTYVGHPL ERL+ +  LDPA L  RL LDP R VL+VLPGSR SEV  L++PF +A   L      P++IIPVV+ VR ++      W  QPHLVEG++DK+ +FRLA AALAASGTVTL+LA+AGTPMV+AYKV+      +R ++ V    L NL+++E  FPE +QE CTPE LA A+  LL D+P+R+ QL ALA IP ++      PSDAAA IVL +A+
Sbjct:   26 LRIFLVAGEHSGDALGGKLMSALSARCKGRIHYLGVGGEDMEAAGLASQFPLSDVAVMGPLSILPRLPRIMSRVYRTVDSAVAAEPDAVVIIDAPEFTHPIAKRIRKRAPFIPIIDYVSPSVWAWRPGRARKMRPYVDHVMGLLPFEPAAHQRLGGPPCTYVGHPLIERLDWMHELDPAPLAERLQLDPGRLVLVVLPGSRTSEVTRLMQPFGEALELLHARRIRPQVIIPVVAHVRPLVERFAQSWTVQPHLVEGEEDKFRAFRLAHAALAASGTVTLQLALAGTPMVVAYKVDG-IAAHMRFLLNVPSVVLANLVLEENAFPELLQEDCTPEKLADALEPLLRDSPERRAQLAALARIPHKMLLDGGTPSDAAADIVLDYAV 408          
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: A0A537S578_9PROT (Lipid-A-disaccharide synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S578_9PROT)

HSP 1 Score: 433 bits (1113), Expect = 3.960e-147
Identity = 235/383 (61.36%), Postives = 282/383 (73.63%), Query Frame = 1
Query:   64 LRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQGLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHA 1212
            LRLF++AGEHSGDALGAKLM AL       + + GVGG  M  QGLVS F + +VAVMG  AIL RLP I+ RVY T+ A +A  PDA+VIID+PEFTH IA+RVR++RPEIPIIDYVSP+VW WRPGRAR MR YVDH+LAL PFEPAAH RLGGPPCTYVGHPL ERL  I ALD A L  RL L P   +L+VLPGSR SEVG L++PF +A   L E G   E+IIPVV SVR +I   LP WP QP+LV G++DK+ +F+LA AALAASGTVTLELA+AGTPMV+AYKV      I+R ++    A L NL++DE  FPE +QE CTP  LA+A+  +L + P R +QL ALA IP+R+  P   PS+AAA +VL +A
Sbjct:   21 LRLFIVAGEHSGDALGAKLMTALNERRRGRVRYVGVGGTQMAEQGLVSQFPIEDVAVMGVGAILARLPKIMSRVYGTVAAAVAADPDALVIIDSPEFTHPIARRVRQRRPEIPIIDYVSPSVWAWRPGRARKMRDYVDHVLALLPFEPAAHLRLGGPPCTYVGHPLIERLAWIAALDTAPLAQRLALPPDATLLVVLPGSRPSEVGRLMKPFGEALTKLIERGRKFEVIIPVVESVRGLIERHLPAWPKQPYLVTGEEDKFRAFKLARAALAASGTVTLELALAGTPMVVAYKVGAPTAAIVRPLITATSAVLANLVLDEKAFPELIQEYCTPANLASALTPILDEGPARAKQLAALARIPQRMQLPRGTPSEAAADVVLYYA 403          
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: UPI0009F821EB (lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009F821EB)

HSP 1 Score: 432 bits (1112), Expect = 5.070e-147
Identity = 229/384 (59.64%), Postives = 284/384 (73.96%), Query Frame = 1
Query:   64 LRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQGLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHAL 1215
            LR+FL+AGEHSGDALG KLM AL       I + GVGGE ME  GL S F +S+VAVMGPL+IL RLP I+ RV++T+DA +A  PDA+VIIDAPEFTH IAKR+R++ P IPIIDYVSP+VW WRPGRAR MRPYVDH++ L PFEPAAH+RLGGPPCTYVGHPL E+++ + A+D AGL  RL LDP R  L+VLPGSR SEV  L++PF +A   L +    P++IIPVV  VR ++   +  W   PHLVEG++DK+ +FRLA AALAASGTVTLELA+AGTPMV+AYKV+      LR ++ V    L NL++ E  FPE +QE CTP  LA A+  LL +TP+RQ Q+TALA IP ++    S+PS  AA IVL +A+
Sbjct:   27 LRIFLVAGEHSGDALGGKLMHALNARCKGRIHYLGVGGEQMEAAGLASQFPLSDVAVMGPLSILPRLPRIISRVHRTVDAAVAAEPDAVVIIDAPEFTHPIAKRIRKRAPSIPIIDYVSPSVWAWRPGRARKMRPYVDHVMGLLPFEPAAHQRLGGPPCTYVGHPLIEKVDWMHAVDAAGLAERLQLDPGRLTLVVLPGSRASEVTRLMQPFGEALELLQQRRVRPQVIIPVVPHVRPLVERHMQSWTVTPHLVEGEEDKFAAFRLAHAALAASGTVTLELALAGTPMVVAYKVDG-IAAQLRFLLNVQSVVLANLVLGENAFPELLQEDCTPVKLADALELLLRETPERQAQVTALARIPHKMLIEGSSPSAEAANIVLDYAV 409          
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Match: A0A6I0EL42_HYPSQ (Lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EL42_HYPSQ)

HSP 1 Score: 432 bits (1110), Expect = 1.090e-146
Identity = 231/383 (60.31%), Postives = 284/383 (74.15%), Query Frame = 1
Query:   64 LRLFLIAGEHSGDALGAKLMAALVGAHGAAITFAGVGGELMEGQGLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTIDAVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGRARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPAGLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEIIIPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTLELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQEACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIVLAHA 1212
            LR+FL+AGEHSGDALG KLM+AL       I + GVGGE ME  GL S F +S+VAVMGPL+IL RLP I+ RVY+T+DA +A  PDA+VIIDAPEFTH IAKR+R++ P +PIIDYVSP+VW WRPGRAR MRPYVDH+LAL PFEPA H+RLGGPPCTYVGHPL ERL+ +  LD A L  RL LDP R VL+VLPGSR SEV  L+ PF +A   L      P++IIPVV  VR  I   +  W  +PHL+EG++DK+ +F+LA AALAASGTVTL+LA+AGTPMV+AYKV+      LR ++ V    L NL+++E +FPEF+QE CTP+ LA+A+  LL DTP+R+ QL ALA IP ++      PSD AA IVL +A
Sbjct:   30 LRIFLVAGEHSGDALGGKLMSALSAQCKGRIHYLGVGGEDMERAGLASQFPLSDVAVMGPLSILPRLPRIMARVYRTVDAAVAAEPDAVVIIDAPEFTHPIAKRIRKRLPFVPIIDYVSPSVWAWRPGRARKMRPYVDHVLALLPFEPAVHQRLGGPPCTYVGHPLIERLDWLHDLDAAPLIERLKLDPGRLVLVVLPGSRASEVTRLMGPFGEALELLHARRIRPQVIIPVVPHVRAFIERHMQSWTVKPHLIEGEEDKFRAFKLAHAALAASGTVTLQLALAGTPMVVAYKVDA-VAARLRFLLNVPSVVLANLVLEENVFPEFLQEECTPQNLASALEQLLRDTPERRAQLAALARIPPKMLLDGGTPSDFAAEIVLDYA 411          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13591.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4XZ27_9HYPH1.890e-15361.14Lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobi... [more]
A0A2W4LC30_9PROT1.550e-15262.08Lipid-A-disaccharide synthase n=1 Tax=Proteobacter... [more]
A0A2W4RS04_9PROT1.100e-15059.48Lipid-A-disaccharide synthase n=1 Tax=Proteobacter... [more]
UPI00093100A68.290e-15059.39lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobi... [more]
UPI000367DDBC1.350e-14959.39lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobi... [more]
UPI00156F81986.480e-14960.84Lipid-A-disaccharide synthase n=2 Tax=Hyphomicrobi... [more]
A0A6I3KI56_9HYPH1.490e-14860.42Lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobi... [more]
A0A537S578_9PROT3.960e-14761.36Lipid-A-disaccharide synthase n=1 Tax=Alphaproteob... [more]
UPI0009F821EB5.070e-14759.64lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobi... [more]
A0A6I0EL42_HYPSQ1.090e-14660.31Lipid-A-disaccharide synthase n=1 Tax=Hyphomicrobi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13591contigP-wetherbeei_contig13591:465..1697 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1267005.KB911258_gene618
Preferred namelpxB
PFAMsLpxB
Model size1233
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00005,RC00059
KEGG koko:K00748
KEGG ReactionR04606
KEGG Pathwayko00540,ko01100,map00540,map01100
KEGG ModuleM00060
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509
Exons1
Evalue2.21e-150
EggNOG OGsCOG0763@1|root,COG0763@2|Bacteria,1MVBI@1224|Proteobacteria,2TSEA@28211|Alphaproteobacteria,3N6R0@45401|Hyphomicrobiaceae
EC2.4.1.182
DescriptionCondensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Cds size1233
COG categoryM
CAZyGT19
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko01005
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185991.5506341-CDS-P-wetherbeei_contig13591:464..16971683185991.5506341-CDS-P-wetherbeei_contig13591:464..1697Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13591 465..1697 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13591.2.1prot_P-wetherbeei_contig13591.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13591 465..1697 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13591.2.1

>prot_P-wetherbeei_contig13591.2.1 ID=prot_P-wetherbeei_contig13591.2.1|Name=mRNA_P-wetherbeei_contig13591.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=411bp
MTGDPAAATGQANAATNVSRPLRLFLIAGEHSGDALGAKLMAALVGAHGA
AITFAGVGGELMEGQGLVSLFAMSEVAVMGPLAILKRLPPIVRRVYQTID
AVLANPPDAIVIIDAPEFTHAIAKRVRRKRPEIPIIDYVSPTVWVWRPGR
ARAMRPYVDHLLALFPFEPAAHERLGGPPCTYVGHPLAERLEVIRALDPA
GLRGRLGLDPTRKVLLVLPGSRRSEVGLLLEPFRQAAHALAEVGALPEII
IPVVSSVRDMIASSLPQWPGQPHLVEGDDDKWLSFRLADAALAASGTVTL
ELAVAGTPMVIAYKVEPWFGVILRRMVKVGMAGLPNLIMDEMIFPEFMQE
ACTPEALAAAVGALLSDTPQRQRQLTALADIPRRLAAPSSNPSDAAARIV
LAHALPRWRG*
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mRNA from alignment at P-wetherbeei_contig13591:465..1697+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13591.2.1 ID=mRNA_P-wetherbeei_contig13591.2.1|Name=mRNA_P-wetherbeei_contig13591.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1233bp|location=Sequence derived from alignment at P-wetherbeei_contig13591:465..1697+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGGCGATCCGGCGGCCGCGACTGGGCAGGCCAACGCCGCGACCAA CGTGTCCAGGCCGTTGCGGTTGTTTTTGATCGCTGGCGAGCACTCGGGCG ATGCGTTGGGCGCGAAGCTCATGGCGGCATTGGTCGGCGCGCACGGGGCC GCTATCACATTCGCCGGCGTCGGTGGTGAACTGATGGAGGGGCAAGGTCT CGTCAGCCTGTTTGCGATGTCCGAGGTCGCGGTCATGGGGCCGCTGGCGA TTCTCAAGCGATTGCCGCCCATCGTTCGCCGTGTCTACCAGACGATCGAC GCCGTGCTTGCCAACCCGCCGGACGCCATCGTGATCATAGATGCGCCGGA GTTCACGCATGCGATCGCCAAGCGGGTCAGGCGCAAGCGGCCGGAAATCC CGATCATCGACTACGTCAGTCCGACGGTATGGGTCTGGCGGCCGGGCCGT GCGCGCGCCATGCGGCCATATGTCGATCATCTTCTGGCGTTGTTTCCGTT CGAGCCCGCAGCGCATGAGCGCCTCGGCGGTCCGCCGTGCACCTATGTCG GTCATCCCCTCGCCGAGCGGCTCGAGGTTATCCGCGCGCTCGATCCGGCG GGGTTGCGCGGTCGTCTCGGACTTGATCCCACGCGCAAGGTTCTCCTCGT ACTGCCGGGCAGCCGGCGTTCCGAAGTGGGCCTCCTGCTCGAGCCGTTCC GGCAAGCAGCACACGCGCTCGCCGAGGTGGGGGCATTGCCGGAAATCATC ATCCCCGTCGTGTCGTCGGTTCGCGACATGATCGCGTCGAGCTTGCCGCA GTGGCCCGGCCAGCCGCACCTCGTGGAAGGTGACGACGACAAGTGGCTTT CATTCCGTCTGGCAGATGCGGCTCTGGCGGCATCGGGAACGGTGACGCTG GAGCTGGCGGTCGCGGGAACTCCGATGGTGATCGCCTACAAGGTCGAGCC GTGGTTCGGCGTCATTCTGCGGCGCATGGTCAAGGTCGGTATGGCCGGTC TGCCGAACCTCATCATGGACGAGATGATTTTCCCGGAGTTCATGCAGGAG GCGTGCACGCCGGAAGCCTTGGCAGCCGCCGTCGGAGCCTTGTTGAGCGA TACCCCGCAGCGGCAACGCCAGCTCACAGCGCTGGCCGATATTCCGCGCC GGCTTGCCGCCCCCAGTTCGAACCCGAGCGATGCGGCGGCGCGGATCGTC CTGGCGCATGCGCTGCCGCGTTGGCGGGGATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13591:465..1697+

>mRNA_P-wetherbeei_contig13591.2.1 ID=mRNA_P-wetherbeei_contig13591.2.1|Name=mRNA_P-wetherbeei_contig13591.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1233bp|location=Sequence derived from alignment at P-wetherbeei_contig13591:465..1697+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGGCGATCCGGCGGCCGCGACTGGGCAGGCCAACGCCGCGACCAA
CGTGTCCAGGCCGTTGCGGTTGTTTTTGATCGCTGGCGAGCACTCGGGCG
ATGCGTTGGGCGCGAAGCTCATGGCGGCATTGGTCGGCGCGCACGGGGCC
GCTATCACATTCGCCGGCGTCGGTGGTGAACTGATGGAGGGGCAAGGTCT
CGTCAGCCTGTTTGCGATGTCCGAGGTCGCGGTCATGGGGCCGCTGGCGA
TTCTCAAGCGATTGCCGCCCATCGTTCGCCGTGTCTACCAGACGATCGAC
GCCGTGCTTGCCAACCCGCCGGACGCCATCGTGATCATAGATGCGCCGGA
GTTCACGCATGCGATCGCCAAGCGGGTCAGGCGCAAGCGGCCGGAAATCC
CGATCATCGACTACGTCAGTCCGACGGTATGGGTCTGGCGGCCGGGCCGT
GCGCGCGCCATGCGGCCATATGTCGATCATCTTCTGGCGTTGTTTCCGTT
CGAGCCCGCAGCGCATGAGCGCCTCGGCGGTCCGCCGTGCACCTATGTCG
GTCATCCCCTCGCCGAGCGGCTCGAGGTTATCCGCGCGCTCGATCCGGCG
GGGTTGCGCGGTCGTCTCGGACTTGATCCCACGCGCAAGGTTCTCCTCGT
ACTGCCGGGCAGCCGGCGTTCCGAAGTGGGCCTCCTGCTCGAGCCGTTCC
GGCAAGCAGCACACGCGCTCGCCGAGGTGGGGGCATTGCCGGAAATCATC
ATCCCCGTCGTGTCGTCGGTTCGCGACATGATCGCGTCGAGCTTGCCGCA
GTGGCCCGGCCAGCCGCACCTCGTGGAAGGTGACGACGACAAGTGGCTTT
CATTCCGTCTGGCAGATGCGGCTCTGGCGGCATCGGGAACGGTGACGCTG
GAGCTGGCGGTCGCGGGAACTCCGATGGTGATCGCCTACAAGGTCGAGCC
GTGGTTCGGCGTCATTCTGCGGCGCATGGTCAAGGTCGGTATGGCCGGTC
TGCCGAACCTCATCATGGACGAGATGATTTTCCCGGAGTTCATGCAGGAG
GCGTGCACGCCGGAAGCCTTGGCAGCCGCCGTCGGAGCCTTGTTGAGCGA
TACCCCGCAGCGGCAACGCCAGCTCACAGCGCTGGCCGATATTCCGCGCC
GGCTTGCCGCCCCCAGTTCGAACCCGAGCGATGCGGCGGCGCGGATCGTC
CTGGCGCATGCGCTGCCGCGTTGGCGGGGATGA
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