mRNA_P-wetherbeei_contig1350.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1350.5.1
Unique NamemRNA_P-wetherbeei_contig1350.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: A0A4D9CZR6_9STRA (AA_TRNA_LIGASE_II_ALA domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZR6_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.320e-45
Identity = 111/293 (37.88%), Postives = 155/293 (52.90%), Query Frame = 1
Query:   10 TERLYIHDTYLVETSATVLSV-----DSSSG---LPGESVVVLDRTIFHPQGGGQPSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGSLPADQRAG--FIEAVNAELRKLVSEDIATVVENRVGCTGCRTISSASDKVERTLPFPLQEVDAMHGSVAGEAEXXXXXXXXXPAAGAHRQQTRIVSVGGTSCPCGGTHVRSTGELGDITVTKIK 858
            T+R Y++DTYL + S+T+L+V     D+S+G   +P   +V  + T+FHPQGGGQPSD G +    G++G   F V   ++  +  + H                   F AG+ V+L +D  RR LHARLHSAGHALD A+ RLG +  L+P KGYHF     VEY+G LPAD+ +    IEA+  ++++L+ EDIAT + +    +     S  S  V     FP +                               Q R+VSVGG  CPCGGTHV+ST ELG + +T+IK
Sbjct:    9 TQRRYLNDTYLYDISSTILAVEPVPPDTSAGSNKMPYFGLVTAE-TVFHPQGGGQPSDVGRVV---GENG-VTFFVDNVRVGENAIIYHYGIFKHEMSENEDGARCVPFRAGEKVKLEIDAARRRLHARLHSAGHALDVAVLRLGLE--LRPTKGYHFEDHPSVEYQGKLPADKGSSERLIEALTLKIQELIEEDIATELYST---SKAEAASMLSGGVNDVAHFPEEA------------------------------QVRLVSVGGNICPCGGTHVKSTKELGGVEITRIK 261          
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: A0A7S1TVS7_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS7_9STRA)

HSP 1 Score: 162 bits (410), Expect = 7.360e-45
Identity = 110/287 (38.33%), Postives = 143/287 (49.83%), Query Frame = 1
Query:   10 TERLYIHDTYLVETSATVLSVDSSSGLPGESV---VVLDRTIFHPQGGGQPSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGSLPADQRAGFIEAVNAELRKLVSEDIATVVENRVGCTGCRTISSASDKVERTLPFPLQEVDAMHGSVAGEAEXXXXXXXXXPAAGAHRQQTRIVSV-GGTSCPCGGTHVRSTGELGDITVTKIK 858
            TERLY+ DTYL E  A  LSV++    P +     V+LDRT+FH QGGGQP+D G I   G      VFEV   +       +H  G + G          A FAAG  V L VDE++R  HAR HSAGHALD A+ R+ +       KGYHF  G YVEY G L  + +   ++ +N ++ +++SEDI T V                      L    +E  A  G+   +                     R+V+V GG +CPCGGTHVRST ELG +TVTK+K
Sbjct:   28 TERLYLLDTYLFEADAAALSVEALEPNPKDDATHAVILDRTVFHAQGGGQPADLGTITADG-----AVFEVTGVR--SAGDAVHHFGSFRGGDGDAP----AAFAAGAAVHLSVDEVKRVAHARCHSAGHALDVAVARI-FGEDWVAGKGYHFLDGPYVEYIGKLAPEMKETIVDTLNEKIAEVLSEDIPTEV----------------------LYLSPEEAKAACGTPDADFSHITAPTI------------RVVTVAGGGTCPCGGTHVRSTAELGGVTVTKVK 268          
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: D7FQB2_ECTSI (Similar to ATP binding / alanine-tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB2_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 9.350e-45
Identity = 112/288 (38.89%), Postives = 143/288 (49.65%), Query Frame = 1
Query:   19 LYIHDTYLVETSATVLSV--DSSSGLPGESVVVLDRTIFHPQGGGQPSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGSLPAD-QRAGFIEAVNAELRKLVSEDIATVVENRVGCTGCRTISSASDKVER-----TLPFPLQEVDAMHGSVAGEAEXXXXXXXXXPAAGAHRQQTRIVSVGGTSCPCGGTHVRSTGELGDITVTKIK 858
            +Y+ DTYL+ + ATVL V  D S G    S ++LDRTIFHPQGGGQPSD G I       GDC   V  +K+    GVI+  G   G              AG    L +D  +R  HA LHSAGHA+D A+          P KGYHF    YVEY G+LPA  ++  FIE  N+EL KLV  ++ T+V+      G    SS+S   +            +EV  +                   AA  +   TR V+V G SCPCGGTHVRST E+  + +TK+K
Sbjct:    1 MYLQDTYLMTSEATVLGVVEDDSQG----SAIILDRTIFHPQGGGQPSDEGTI-----TCGDCTVPV--SKVRDVGGVIYHYGTMSGTPQPR-------LEAGRPASLALDSAKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGTLPAGLEKDAFIEKCNSELDKLVMANMETMVKMADQEHGDEAPSSSSSSAQEGPSRGAAGRGREEVTVVAERGGRGGRGKVPASSTAAAATKYGAATRTVTVAGLSCPCGGTHVRSTREMEGVRITKVK 270          
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: L8GVN5_ACACA (Threonine/alanine tRNA ligase subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVN5_ACACA)

HSP 1 Score: 155 bits (393), Expect = 1.590e-42
Identity = 107/291 (36.77%), Postives = 146/291 (50.17%), Query Frame = 1
Query:   10 TERLYIHDTYLVETSATVLSVDSSSGLPGESV------VVLDRTIFHPQGGGQPSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGS-LPADQRAGFIEAVNAELRKLVSEDIATVVENRVGCTGCRTISSASDKVERTLPFPLQEVDAMHGSVAGEAEXXXXXXXXXPAAGAH-RQQTRIVSV-GGTSCPCGGTHVRSTGELGDITVTKI 855
            TE+ Y  DTY    +A V+ V       G +       VVLDRTIFHPQGGGQP DTG++  A G      F V   + N  DGVI   G +             TF AGD VEL++DE +R LHARLHSAGH LD A+  L  +  L P KGYHF    YVEY+G+ +PAD+R   ++ +  E  +L++E     V+                     +    +EV+ + GS +               +GA+  +  R+V+V     CPCGGTHV++TGE+G I + K+
Sbjct:    6 TEQAYWEDTYRFRDTAHVVQVAEHPPPRGSAAGASYFAVVLDRTIFHPQGGGQPFDTGVVASAAG----VKFTVSEVRANREDGVIQHIGTFAEA--------GTTFQAGDEVELQIDEAKRRLHARLHSAGHLLDKAVANLFPEYNLIPDKGYHFADAPYVEYKGTFVPADKRQSALKRLEDECNRLIAEGSEVTVQ---------------------VVHSKEEVERLCGSASD--------------SGANPTEPVRVVTVCAPLGCPCGGTHVQNTGEIGRIAIPKM 249          
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: A0A7S2WSC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSC3_9STRA)

HSP 1 Score: 148 bits (373), Expect = 3.450e-39
Identity = 97/283 (34.28%), Postives = 140/283 (49.47%), Query Frame = 1
Query:   10 TERLYIHDTYLVETSATVLSVDSSSGLPGESVVVLDRTIFHPQGGGQPSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGSLPADQRAGFIEAVNAELRKLVSEDIATVVENRVGCTGCRTISSASDKVERTLPFPLQEVDAMHGSVAGEAEXXXXXXXXXPAAGAHRQQTRIVSVGGTSCPCGGTHVRSTGELGDITVTKIK 858
            T +LY+ DTY  ET A V+ V+      G+  V+LD+T+FHPQGGGQP+D G++   GG+     F V   K +   G++   G             + +  AG  V+ R+D   RS+ +RLHSAGHA+DAA+  L     L P KGYHFP   YVEY G+L A+++    E +  EL+ ++ + + + V                  V  + P  L+     + S+  E                     R+V+VGG  CPCGGTHV +  EL  +TVT+IK
Sbjct:   48 TNKLYLADTYRTETPAVVVEVEPVPE-SGDLKVILDKTVFHPQGGGQPADKGVLSFPGGE-----FRVSMVKEDRSTGLVFHFGSM--------GSGSGSLEAGTEVDARIDPEWRSVCSRLHSAGHAMDAAMTALAVS-GLTPTKGYHFPDAPYVEYAGTLAAEEKDSLQERLTNELQSIIEKQVPSKV------------------VYLSAPEVLELCPGANVSIFPEGA-----------------MIRVVNVGGCWCPCGGTHVGNASELERVTVTRIK 280          
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: A0A7S3Z8T4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8T4_9EUKA)

HSP 1 Score: 143 bits (360), Expect = 1.400e-37
Identity = 98/286 (34.27%), Postives = 131/286 (45.80%), Query Frame = 1
Query:    1 MQATERLYIHDTYLVETSATVLSVDSSSGLPGESVVVLDRTIFHPQGGGQPSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGSLPADQRAGFIEAVNAELRKLVSEDIATVVENRVGCTGCRTISSASDKVERTLPFPLQEVDAMHGSVAGEAEXXXXXXXXXPAAGAHRQQTRIVSVGGTSCPCGGTHVRSTGELGDITVTKIK 858
            + +T  LY+ DTY  +  A V+ + S      ES+V+ D+TIFHPQGGGQPSD G +       G   FEV         G I   G +             +F  GD+V   V+  +R  HAR+HSAGH LD A+ ++G  R  KP KGYH+P G+YVEY G +   +R   +  + A + +L+  DIAT VE +                           +  H SVAG  E                            CPCGGTHVRSTGE+  + VTK+K
Sbjct:   44 LPSTNPLYMDDTYRNKAEAKVIQIVSGEQ---ESIVITDQTIFHPQGGGQPSDEGTM-----TVGSNNFEVKKVTKAKETGAILHAGVFR----------RGSFREGDVVSQEVNMTKRIFHARIHSAGHLLDVAMAKIGEQR--KPGKGYHYPQGAYVEYIGKIDVKERDAIVTKLQAAIDELIKSDIATKVELKN--------------------------NIRHVSVAGVEE---------------------------GCPCGGTHVRSTGEIKSMRVTKLK 256          
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: A0A540KN44_MALBA (AA_TRNA_LIGASE_II_ALA domain-containing protein n=3 Tax=Maleae TaxID=721813 RepID=A0A540KN44_MALBA)

HSP 1 Score: 142 bits (357), Expect = 2.860e-37
Identity = 101/280 (36.07%), Postives = 136/280 (48.57%), Query Frame = 1
Query:   22 YIHDTYLVETSATVLSVDSSSGLPGESVVVLDRTIFHPQGGGQPSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGSLPADQRAGFIEAVNAELRKLVSEDIATVVENRVGCTGCRTISSASDKVERTLPFPLQEVDAMHGSVAGEAEXXXXXXXXXPAAGAHRQQTRIVSVGGT-SCPCGGTHVRSTGELGDITVTKIK 858
            Y  DT+ ++++AT+LSV  S G  G + +VLDRTIF+PQGGGQP+DTG I  A  DSG    + V   +   DG+++  G              + F  G  V L VDE RR L+ARLHSAGH LD  ++ +G    L+P KGYHFP G YVEY+G++P        + +  E   L+S                        KV   L  P +E   + G                P   A     RIV +G +  CPCGGTHV    E+  ITVT+++
Sbjct:   13 YFDDTWKLQSTATLLSV--SKGEDGRTALVLDRTIFYPQGGGQPADTGFI--AASDSG---VKFVVEDVRSRDGIVYHYG----FIENSGEESESKFEKGKEVLLCVDESRRRLNARLHSAGHLLDTCMRTVGLGD-LEPTKGYHFPQGPYVEYKGTVPQKDTESKRKELEVEANALISR---------------------GGKVSAAL-LPYEEACKLCGDCL-------------PDYIAKDSTPRIVKLGDSLGCPCGGTHVSDISEIKSITVTQVR 245          
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: A0A0D2UDV3_CAPO3 (Alanyl-tRNA synthetase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UDV3_CAPO3)

HSP 1 Score: 139 bits (351), Expect = 4.910e-36
Identity = 101/256 (39.45%), Postives = 129/256 (50.39%), Query Frame = 1
Query:  106 VVLDRTIFHPQGGGQPSDTGLI-FRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAA--TFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGSLPADQRAGFIEAVNAELRKLVSEDIATVVENRVGCTGCRTISSASDKVERTLP--FPLQEVDAMHGSVAGEAEXXXXXXXXXPAAGAHRQQTRIVSVGGTSCPCGGTHVRSTGELGDITVTKIK 858
            +VLD TI HPQGGGQPSD G I + A  +    V +V A K      V+H  G +          DAA  T +AG  V + VDE +R LHARLHSAGH LD+A++ LG+   L P+KGYHFP G  VEY G L    R G   A+N EL++L    IAT  + +V      T+           P   P QE                      P         R+V++GG  CPCGGTHV+S G+L ++ VTK+K
Sbjct:   50 LVLDETIMHPQGGGQPSDVGFIQWDAQPERRFTVVDVRADK--GAAAVVHHYGSF----GSQDLDDAALATASAGAPVTIHVDESKRRLHARLHSAGHLLDSAVRNLGHT-GLVPSKGYHFPDGPNVEYLGELEQTVRDGLPAALNIELQRL----IATGGDVQVKYVPTSTLEGGGSGHSLAAPSAVPAQETSE-------------------PLRYDSPDAVRMVNIGGVECPCGGTHVKSIGDLQNVKVTKVK 275          
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: A0A6S8DSJ9_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8DSJ9_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.430e-35
Identity = 102/293 (34.81%), Postives = 137/293 (46.76%), Query Frame = 1
Query:   10 TERLYIHDTYLVETSATVLSVDSS------SGLPGESV----VVLDRTIFHPQGGGQPSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGSLPADQRAGFIEAVNAELRKLVSEDIATVVENRVGCTGCRTISSASDKVERTLPFPLQEVDAMHGSVAGEAEXXXXXXXXXPAAGAHRQQTRIVSVGGTS-CPCGGTHVRSTGELGDITVTKI 855
            T+R+Y  DTY+    ATVL++  +      +G   + +    VV  +TIFHPQGGGQPSD G +      SG C F V+    N+  G I   G + G            F  G  V+  +D  +RSLHARLHSAGH LDAAL + GY   LKP KG HFP+ +YVEYEG +PAD++   +  +   L K+V E I T + N                                                    G   + +RIV VG    CPCGGTH+ +T +LG +++ KI
Sbjct:   38 TQRIYFEDTYMFANEATVLNIFKADKNFIKNGSNDDEIDYYTVVTAQTIFHPQGGGQPSDEGTMQCV--SSGVC-FVVITVTSNN--GTIFHTGYFNGEH----------FLKGTRVKQVIDAKKRSLHARLHSAGHCLDAALVQAGYTD-LKPTKGCHFPTMTYVEYEGKVPADEKEKLMAQLEEILDKMVQEGIPTRINN---------------------------------------------------PGIDGKSSRIVYVGSEEGCPCGGTHINNTNQLGKVSIRKI 263          
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Match: A0A835Z9X7_9STRA (Alanyl-tRNA editing protein AlaX-M-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X7_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.890e-35
Identity = 90/206 (43.69%), Postives = 111/206 (53.88%), Query Frame = 1
Query:    1 MQATERLYIHDTYLVETSATVLSVDSSSGLPGESVVVLDRTIFHPQGGGQPSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHXXGRWLGXXXXXXXXDAATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKGYHFPSGSYVEYEGSLPADQRAGFIEAVNAELRKLVSEDIATVVENRVGCTGCRTIS 618
            M +TERLY+ DTY    SA V+ V        +  VVLDRT+FHPQGGGQP+D G +        +  F V   K +  D ++H      G               GD VE  +D  RR   ARLHSAGHALDAA++  G+  ALKP KGYHF  G YVEYEG+L AD RA  ++ +NAEL  L+   I T V  R    G R +S
Sbjct:    1 MASTERLYLQDTYSHACSARVVEVR-------DDAVVLDRTVFHPQGGGQPTDRGTLKI----HNEVAFVVANVKADG-DVILHFGQHGEGDKK---------LQTGDEVEASIDLQRRLQLARLHSAGHALDAAVRNAGF-AALKPTKGYHFEDGPYVEYEGALSADDRATLVDKLNAELALLIEAAIETAV--RQSEAGLRVVS 182          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1350.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9CZR6_9STRA1.320e-4537.88AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]
A0A7S1TVS7_9STRA7.360e-4538.33Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
D7FQB2_ECTSI9.350e-4538.89Similar to ATP binding / alanine-tRNA ligase n=1 T... [more]
L8GVN5_ACACA1.590e-4236.77Threonine/alanine tRNA ligase subfamily protein n=... [more]
A0A7S2WSC3_9STRA3.450e-3934.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3Z8T4_9EUKA1.400e-3734.27Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A540KN44_MALBA2.860e-3736.07AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]
A0A0D2UDV3_CAPO34.910e-3639.45Alanyl-tRNA synthetase n=2 Tax=Capsaspora owczarza... [more]
A0A6S8DSJ9_9STRA1.430e-3534.81Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A835Z9X7_9STRA1.890e-3543.69Alanyl-tRNA editing protein AlaX-M-like protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1350contigP-wetherbeei_contig1350:5234..7022 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FQB2
PFAMstRNA-synt_2c,tRNA_SAD
Model size858
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.53e-45
EggNOG OGsCOG2872@1|root,2S23F@2759|Eukaryota
DescriptionThreonyl and Alanyl tRNA synthetase second additional domain
Cds size858
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185988.12258-CDS-P-wetherbeei_contig1350:5233..55091683185988.12258-CDS-P-wetherbeei_contig1350:5233..5509Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1350 5234..5509 -
1683185988.1359675-CDS-P-wetherbeei_contig1350:5728..57821683185988.1359675-CDS-P-wetherbeei_contig1350:5728..5782Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1350 5729..5782 -
1683185988.1541893-CDS-P-wetherbeei_contig1350:6063..62911683185988.1541893-CDS-P-wetherbeei_contig1350:6063..6291Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1350 6064..6291 -
1683185988.1675496-CDS-P-wetherbeei_contig1350:6378..66261683185988.1675496-CDS-P-wetherbeei_contig1350:6378..6626Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1350 6379..6626 -
1683185988.182191-CDS-P-wetherbeei_contig1350:6970..70221683185988.182191-CDS-P-wetherbeei_contig1350:6970..7022Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1350 6971..7022 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1350.5.1prot_P-wetherbeei_contig1350.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1350 5234..7022 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1350.5.1

>prot_P-wetherbeei_contig1350.5.1 ID=prot_P-wetherbeei_contig1350.5.1|Name=mRNA_P-wetherbeei_contig1350.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp
MQATERLYIHDTYLVETSATVLSVDSSSGLPGESVVVLDRTIFHPQGGGQ
PSDTGLIFRAGGDSGDCVFEVVAAKLNHHDGVIHHHGRWLGGGSSGSSSD
AATFAAGDIVELRVDEMRRSLHARLHSAGHALDAALQRLGYDRALKPAKG
YHFPSGSYVEYEGSLPADQRAGFIEAVNAELRKLVSEDIATVVENRVGCT
GCRTISSASDKVERTLPFPLQEVDAMHGSVAGEAEGEGAGAEAGPAAGAH
RQQTRIVSVGGTSCPCGGTHVRSTGELGDITVTKIK
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mRNA from alignment at P-wetherbeei_contig1350:5234..7022-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1350.5.1 ID=mRNA_P-wetherbeei_contig1350.5.1|Name=mRNA_P-wetherbeei_contig1350.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1789bp|location=Sequence derived from alignment at P-wetherbeei_contig1350:5234..7022- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGCAACAGAGCGCCTCTACATTCATGACACGTATCTCGTTGAGAC CTGTAAGTGCTCTTTTCTGCGCCTCGCTTTGTCATCGTTGCATAGCCGTG TTTCTTCCCGAAGCGGTTGCACCCGATTCCATTGTCTTGCTGATTTCCGT CTCTATTTTCCTTGAATAGTCCCGCTTCACCCGTTTTACCTCTAAATGTC GGTTTCCAGCCGTAAGTGCAGATAATCAAGTGGTGCAAAGCTGTGTTTTG ATTACTGAGACGGTTTTAAAATGTTTTATCCTGACTTCTTGCATCAGCGC TATCCTCTCCATTTGCGGGTTTTTTGCGTTTCAGTGACGACGCAATCTAG TTTATTCGTCGCCATTTGACGGCCGATAACAACGTTCCATCCGCAGCGGC AACCGTGCTCTCCGTGGACTCTTCCTCGGGCTTGCCGGGCGAGAGTGTAG TTGTCCTCGACCGCACTATCTTCCACCCGCAAGGTGGTGGGCAGCCCAGC GATACCGGCCTCATCTTCCGCGCTGGCGGCGACTCCGGCGACTGCGTCTT TGAGGTGGTGGCCGCCAAGCTTAACCACCACGATGGCGTGATACACCACC ACGGCCGATGGCTCGGTGGCGGCAGCAGCGGCAGCAGCAGCGACGTTGAC GGCGGCGGCGGCGGCGCCGGTGGCGGCGGCGGCGGCGGCGCCGGTGGCGG CGGCGGCGGCGGCGGCGGCGGCGACAACCAGGCGGCGACCTTTGCCGCGG GGGACATCGTGGAATTGCGGGTGGACGAAATGAGACGATCACTCCACGCA CGACTGCACTCTGCGGGCCACGCCCTCGACGCCGCGCTGCAGCGGCTCGG CTACGACAGGGCGCTGAAGCCTGCCAAAGGGTACCATTTTCCGAGTGGCA GTTATGTCGAATACGAAGGGTCGCTTCCGGCGGACCAGCGGGCAGGCTTC ATCGAAGCGGTGCGTCGGTTTCCCGTCTCCCATTCCCCGTTCATTCTAAA CTAGCTTATATGGGACAGTTCGCAATGATTTTGCGACATCGGGCTTCCTC TTTGTCCTCAGTTCGGTTCCTTGCTCGGCGCTCGGATTTCGTAGGAGTTG CTTACAACCGGTGACAAGCAATGGGCTTTATGGCTTCGCGTTTATTAGTT CTGCCAGCGGGATAGGCCTGTATTTCGATTTTTATGGCATTCGATTGGCC AACCAACCAATCAGTCGGCCATTGACTGGCGCCGCGTCAGGTGAATGCGG AGTTGCGGAAGCTTGTCTCAGAAGATATTGCGACGGTTGTAGAGGTAAGA GAATTTTCCCTTCCTGGCTGAGGCTGCTTTTCTTTCTTTGGCTCCTCTTT CTTCTTTGCTGGCTGCTCTCTCCTTTTATTTCCAGCACTGATGTTGGTCA TGGCGACCGGGATTTTGGTTCCACATCGTCGATGGGCTGGGTACAAGGGC TTTTATTTTCGTCTGTATTGCCCTTCGTCCGATTTGTCTACTTTTCGTGT TGTTTATGACCAGAATCGAGTCGGATGCACGGGTTGTCGTACCATTTCCT CTGCATCGGACAAAGTGGAACGGACGTTACCATTTCCTCTGCAGGAGGTT GACGCGATGCACGGCAGCGTGGCTGGAGAGGCAGAGGGGGAAGGAGCGGG AGCAGAAGCAGGGCCGGCAGCGGGGGCCCACCGACAGCAGACAAGAATCG TGTCTGTTGGCGGGACGTCGTGCCCCTGCGGCGGCACCCACGTGCGCAGC ACGGGAGAGCTTGGAGACATCACCGTGACCAAGATCAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1350:5234..7022-

>mRNA_P-wetherbeei_contig1350.5.1 ID=mRNA_P-wetherbeei_contig1350.5.1|Name=mRNA_P-wetherbeei_contig1350.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig1350:5234..7022- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGCAACAGAGCGCCTCTACATTCATGACACGTATCTCGTTGAGAC
CTCGGCAACCGTGCTCTCCGTGGACTCTTCCTCGGGCTTGCCGGGCGAGA
GTGTAGTTGTCCTCGACCGCACTATCTTCCACCCGCAAGGTGGTGGGCAG
CCCAGCGATACCGGCCTCATCTTCCGCGCTGGCGGCGACTCCGGCGACTG
CGTCTTTGAGGTGGTGGCCGCCAAGCTTAACCACCACGATGGCGTGATAC
ACCACCACGGCCGATGGCTCGGTGGCGGCAGCAGCGGCAGCAGCAGCGAC
GCGGCGACCTTTGCCGCGGGGGACATCGTGGAATTGCGGGTGGACGAAAT
GAGACGATCACTCCACGCACGACTGCACTCTGCGGGCCACGCCCTCGACG
CCGCGCTGCAGCGGCTCGGCTACGACAGGGCGCTGAAGCCTGCCAAAGGG
TACCATTTTCCGAGTGGCAGTTATGTCGAATACGAAGGGTCGCTTCCGGC
GGACCAGCGGGCAGGCTTCATCGAAGCGGTGAATGCGGAGTTGCGGAAGC
TTGTCTCAGAAGATATTGCGACGGTTGTAGAGAATCGAGTCGGATGCACG
GGTTGTCGTACCATTTCCTCTGCATCGGACAAAGTGGAACGGACGTTACC
ATTTCCTCTGCAGGAGGTTGACGCGATGCACGGCAGCGTGGCTGGAGAGG
CAGAGGGGGAAGGAGCGGGAGCAGAAGCAGGGCCGGCAGCGGGGGCCCAC
CGACAGCAGACAAGAATCGTGTCTGTTGGCGGGACGTCGTGCCCCTGCGG
CGGCACCCACGTGCGCAGCACGGGAGAGCTTGGAGACATCACCGTGACCA
AGATCAAG
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