mRNA_P-wetherbeei_contig13460.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13460.1.1 vs. uniprot
Match: A0A1F4ISU6_9BURK (Pilus assembly protein PilF n=3 Tax=Burkholderiales TaxID=80840 RepID=A0A1F4ISU6_9BURK) HSP 1 Score: 66.2 bits (160), Expect = 4.310e-11 Identity = 39/103 (37.86%), Postives = 49/103 (47.57%), Query Frame = 1
Query: 7 GYVYHLKKDYERAITAFRDALRRDQKIDRAWYGLGLALGSLGRHEESAEALERAASLQPMNGHXXXXXXXXXXXXXXXXXXXXVTAHLDRFDPKMALHLTRGT 315
YV A FR AL+ D+K+DRAWYGLGL L GR +E+ +AL+R LQPM+ V HL F+PK+A L R T
Sbjct: 95 AYVAEQLDQLALAEEGFRAALQIDEKMDRAWYGLGLVLVRQGRLQEALQALDRNTRLQPMSPFGWYQMARVHVDLHQPEEARAVIRHLKGFEPKVAAQLERET 197
BLAST of mRNA_P-wetherbeei_contig13460.1.1 vs. uniprot
Match: UPI001AE03BD5 (tetratricopeptide repeat protein n=1 Tax=Rhodoferax sp. AJA081-3 TaxID=2752316 RepID=UPI001AE03BD5) HSP 1 Score: 66.2 bits (160), Expect = 4.440e-11 Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 1
Query: 37 ERAITAFRDALRRDQKIDRAWYGLGLALGSLGRHEESAEALERAASLQPMNGHXXXXXXXXXXXXXXXXXXXXVTAHLDRFDPKMALHLTRGT 315
E A FR ALR ++K+DRAWYGLGL L GR +E+ +AL+R LQPM+ V HL F+PK+A L R T
Sbjct: 105 EIAEQGFRAALRIEEKMDRAWYGLGLVLVRQGRLDEALDALKRNTKLQPMSPFGWYQMARVHVDLQQPEEARAVIRHLKGFEPKVAAQLERET 197
BLAST of mRNA_P-wetherbeei_contig13460.1.1 vs. uniprot
Match: A0A0P0MC35_9BURK (Lipoprotein NlpI n=1 Tax=Limnohabitans sp. 63ED37-2 TaxID=1678128 RepID=A0A0P0MC35_9BURK) HSP 1 Score: 61.6 bits (148), Expect = 2.480e-9 Identity = 38/105 (36.19%), Postives = 51/105 (48.57%), Query Frame = 1
Query: 1 DLGYVYHLKKDYERAITAFRDALRRDQKIDRAWYGLGLALGSLGRHEESAEALERAASLQPMNGHXXXXXXXXXXXXXXXXXXXXVTAHLDRFDPKMALHLTRGT 315
++G+V + A AFR A++ D+K+DRAWYGLGL L R EES A +R LQ M+ + V HL F+PK+A L R T
Sbjct: 93 NVGFVREELGLSQDAEQAFRAAIQIDEKMDRAWYGLGLVLVRQRRFEESLLAFKRNTELQSMSPYAWYQMARVHMEMHAPDKALEVMRHLKGFEPKVAAQLERET 197
BLAST of mRNA_P-wetherbeei_contig13460.1.1 vs. uniprot
Match: A0A315E141_9BURK (Pilus assembly protein PilF n=2 Tax=Limnohabitans sp. 2KL-17 TaxID=1100704 RepID=A0A315E141_9BURK) HSP 1 Score: 61.2 bits (147), Expect = 3.470e-9 Identity = 38/105 (36.19%), Postives = 49/105 (46.67%), Query Frame = 1
Query: 1 DLGYVYHLKKDYERAITAFRDALRRDQKIDRAWYGLGLALGSLGRHEESAEALERAASLQPMNGHXXXXXXXXXXXXXXXXXXXXVTAHLDRFDPKMALHLTRGT 315
++G+V + A AF A+ D+K+DRAWYGLGLAL R ES A ER LQ M+ + V HL F+PK+A L R T
Sbjct: 93 NVGFVCEELGRSQDAEAAFNAAIAIDEKMDRAWYGLGLALVRQQRFAESLVAFERNTQLQSMSPYAWYQMARVHMEMQEPDKALQVMRHLKGFEPKVAAQLERET 197
BLAST of mRNA_P-wetherbeei_contig13460.1.1 vs. uniprot
Match: A0A552Q6C8_9CHRO (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Microcystis panniformis Mp_MB_F_20051200_S9 TaxID=2486223 RepID=A0A552Q6C8_9CHRO) HSP 1 Score: 51.6 bits (122), Expect = 2.560e-5 Identity = 25/61 (40.98%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 7 GYVYHLKKDYERAITAFRDALRRD--QKIDRAWYGLGLALGSLGRHEESAEALERAASLQP 183
G ++ L++ +E AI AF +A++++ + + AWYG GLALGSLG+++ + EAL++A + P
Sbjct: 545 GQLWRLQR-FEEAIKAFDEAIKQNDPKNVYLAWYGKGLALGSLGKYQPAIEALQQAINTLP 604
BLAST of mRNA_P-wetherbeei_contig13460.1.1 vs. uniprot
Match: A0A3C1G4E7_9BACT (Uncharacterized protein n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A3C1G4E7_9BACT) HSP 1 Score: 50.1 bits (118), Expect = 6.370e-5 Identity = 21/60 (35.00%), Postives = 36/60 (60.00%), Query Frame = 1
Query: 4 LGYVYHLKKDYERAITAFRDALRRDQKIDRAWYGLGLALGSLGRHEESAEALERAASLQP 183
LG Y+ K+Y+ A+ AF+D++RR +YGL L + G++ ++A L++A L P
Sbjct: 146 LGMAYYRIKNYQAAMDAFKDSIRRFSDFSYPYYGLALVYNATGKYTDAAMTLQKALELDP 205 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13460.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13460.1.1 >prot_P-wetherbeei_contig13460.1.1 ID=prot_P-wetherbeei_contig13460.1.1|Name=mRNA_P-wetherbeei_contig13460.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp DLGYVYHLKKDYERAITAFRDALRRDQKIDRAWYGLGLALGSLGRHEESAback to top mRNA from alignment at P-wetherbeei_contig13460:2..316+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13460.1.1 ID=mRNA_P-wetherbeei_contig13460.1.1|Name=mRNA_P-wetherbeei_contig13460.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig13460:2..316+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13460:2..316+ >mRNA_P-wetherbeei_contig13460.1.1 ID=mRNA_P-wetherbeei_contig13460.1.1|Name=mRNA_P-wetherbeei_contig13460.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig13460:2..316+ (Phaeothamnion wetherbeei SAG_119_79)back to top |