mRNA_P-wetherbeei_contig13415.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13415.1.1
Unique NamemRNA_P-wetherbeei_contig13415.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: A0A835YJV7_9STRA (Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV7_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 3.030e-157
Identity = 242/436 (55.50%), Postives = 308/436 (70.64%), Query Frame = 1
Query:   16 AEIFGIEMAANHEYLFS-GAKFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQLEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADLTA---GLPDAV---VVVKVPRSGGVVQRDVEYRRRERATRIREYFYGAGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRVGGAQISDSMLPLGQASLLGPTRVARVRPTAELTHSLLAVCHPVLTPDGTVVGQEVAGGEDDERAAQELLRSNAAGFVYVTEVNMETRRMTVLTPCPGALPSNYLFVGNIKWAE 1302
            AEIFG+E+A N EY FS GAK AV+TWYGC+++TT    V Y + +TPM+ YVN+H QLEARR +AL +L  G  A  GPRV+V G  DSGK++L  +L AYAVR+GRTPT+VDLDV  G+IT+PG ++A ++D  TLSIEE  +LAAPL F YGH  P +NPEL++ +V  LA  VEQRQ ND +A  AG VVNTCGW++G+G +LL H + AL+ D+VLVMGHD+LYA+L A    LPD      VVK+P SGGVVQR  + RR+ RA R+REYFYGA                         L+P++LEL++D VRV RVGG Q+S  +LP+GQA+LLGPTRV+ V+P+ +L H++LAVCHPVL PDGT +     GG DD  A QE+   N AGFVYVTEV+M  RR+ V++PCPG LPS YL VG I+W+E
Sbjct:   42 AEIFGVELAVNTEYHFSAGAKVAVFTWYGCKLQTTRTAEVLYVAKDTPMLSYVNTHIQLEARRDQALSKLSKGEKAV-GPRVLVAGATDSGKSSLCAVLCAYAVRLGRTPTFVDLDVGQGEITIPGTVSAVSLDSGTLSIEERLSLAAPLTFFYGHDSPGENPELFRHMVSRLAECVEQRQANDRDAAAAGTVVNTCGWVDGLGLELLRHCIDALSIDIVLVMGHDKLYAELMADSEALPDDAPPRTVVKLPTSGGVVQRSAQQRRQGRAARVREYFYGA---------------PHAERRASPALTPTLLELRMDSVRVCRVGGTQLSGGLLPVGQAALLGPTRVSMVKPSHDLLHAVLAVCHPVLKPDGTALVPGEEGGLDD--AGQEIADCNVAGFVYVTEVDMVGRRLVVMSPCPGDLPSAYLLVGGIRWSE 459          
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: D8LR58_ECTSI (Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR58_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 4.710e-154
Identity = 249/437 (56.98%), Postives = 312/437 (71.40%), Query Frame = 1
Query:    1 LKAGKAEIFGIEMAANHEYLFSGAKFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQLEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADLTAGLPDAVVVVKVPRSGGVVQRDVEYRRRERATRIREYFYGAGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRVGGAQISDSMLPLGQA-SLLGPTRVARVRPTAELTHSLLAVCHPVLTPDGTVVG--QEVAGGEDDERAAQELLRSNAAGFVYVTEVNMETRRMTVLTPCPGALPSNYLFVGNIKWAE 1302
            L+   AE+FGIE+AA +EY FS  K AV+TWYGC +ETTG     Y + ETPM  YVN+H+QLEARR +AL+ LQ GR    GPRV+VVG  DSGK+ LA ILAAYAVR+GR PT+VDLDV  G ITVPG +AAAA+D  ++S+EEGF+L APLV  YGHT   +NPEL+K LV  +A  +++R  ND +A  +G + NTCGW+EG+G +LL HA+  L  DVVLVM HDRLYAD+ A LP +V V+ +PRSGGV  R  +YRR  R  R REYFY           XXXXXXXXXXXXX   LSP+ L L  +DV ++RVGG  +SD+MLP+G + S LGP +V    P+++L H++LAVCHPVL  DGT++G    + G  D   AAQELL SNAAGFVYVTEV+M+ RR+ VL+PCPG+LPS +L  G +KW E
Sbjct:   35 LRENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRVANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVALRSSQYRRASRDRRCREYFY-----------XXXXXXXXXXXXXAPALSPAALHLDFNDVSIFRVGGQTVSDAMLPVGHSDSSLGPLQVNPFYPSSDLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSAEAAQELLNSNAAGFVYVTEVDMDKRRLAVLSPCPGSLPSRFLIAGTVKWQE 460          
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: A0A6H5KLD2_9PHAE (Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD2_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 9.470e-119
Identity = 216/390 (55.38%), Postives = 272/390 (69.74%), Query Frame = 1
Query:    1 LKAGKAEIFGIEMAANHEYLFSGAKFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQLEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADLTAGLPDAVVVVKVPRSGGVVQRDVEYRRRERATRIREYFYGAGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRVGGAQISDSMLPLGQA-SLLGPTRVARVRPTAELTHSLLAVCHPVLTPDGTVVG--QEVAGGEDDERAAQ 1161
            LK   AE+FGIE+AA +EY FS  K AV+TWYGC +ETTG     Y + ETPM  YVN+H+QLEARR +AL+ LQ GR    GPRV+VVG  DSGK+ LA ILAAYAVR+GR PT+VDLDV  G I VPG +AAAA+D  ++S+EEGF+L APLV  YGHT   +NPEL+K LV  +A  +++R  ND +A  +G + NTCGW+EG+G +LL HA+  L  DVVLVM HDRLYAD+ A LP +V V+ +PRSGGV  R  +YRR  R  R REYFYG            XXXXXXXXXXX   LSP+ L L  +DV ++RVGG  +SD+MLP+G + S LGP +V  + P+++L H++LAVCHPVL  DGT++G    + G  D   AAQ
Sbjct:   35 LKENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMIAVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRMANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVALRSSQYRRASRDRRCREYFYGX-----------XXXXXXXXXXXAPALSPAALHLDFNDVSIFRVGGQTVSDAMLPVGHSDSSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSAEAAQ 413          
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: A0A3R7G6W1_9STRA (Protein CLP1 homolog n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6W1_9STRA)

HSP 1 Score: 335 bits (860), Expect = 2.460e-107
Identity = 193/441 (43.76%), Postives = 260/441 (58.96%), Query Frame = 1
Query:    1 LKAGKAEIFGIEMAANHEYLFSGAKFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQLEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADLTAGLPDAVV------VVKVPRSGGVVQRDVEYRRRERATRIREYFYGAGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRVGGAQISDSMLPLGQASL-LGPTRVARVRPTAELTHSLLAVCHPVLTPDGTVVGQEVAGGEDDERAAQELLRSNAAGFVYVTEVNMETRRMTVLTPCPGALPSNYLFVGNIKWAE 1302
            LK+G AE+FG+E+A + EY+F   K A++TWYGC +E  G   VAY S ETPM  Y+N H+QL+ RR     EL   +  A GPRV+V GP DSGK+ L  IL  YA+R+G  PT V+LDV  G I+VPG L+A+ +D  +LS+EE F L  PL F YGHT P++N EL++   ++LA  V++R TND E   AG VVNTCGW++GVG+ LL+HA+     DVVLV+G DRLY+ L + L  A        ++K+ RSGGVV    + R   R + IREYFYGA +                       LSP + E   DDV  Y +   ++SD MLP+GQ        RV  V  TA+L HSL AV +P         GQ+ +     + +   LL + AAGFV++ EV +  +++ +L P PG LPS  L +G+IKW E
Sbjct:   28 LKSGSAELFGVELAIDREYVFRDRKLAIFTWYGCTLEVRGAPEVAYTSEETPMDSYLNIHAQLQRRR-----ELAKAKHGA-GPRVLVCGPVDSGKSTLTQILINYALRLGEKPTLVELDVGHGCISVPGTLSASPLDMNSLSVEEEFILTNPLAFFYGHTAPSENVELFRYQQQQLAKVVKRRLTNDEEVNAAGCVVNTCGWVDGVGFDLLVHAIKEFELDVVLVIGQDRLYSRLQSALTGANAGGVERSILKLSRSGGVVPLSTKLRSAARISCIREYFYGAHS----------------LSVTIPTLSPCINEFSFDDVSFYAIKDMKVSDVMLPVGQVETQTDRLRVVPVEKTADLGHSLAAVAYPRH-------GQDASSSSSTDLSW--LLGAPAAGFVFIKEVRVAEQKLVLLVPSPGPLPSRNLLIGSIKWME 437          
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: F0YC73_AURAN (Protein CLP1 homolog n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC73_AURAN)

HSP 1 Score: 335 bits (860), Expect = 8.210e-107
Identity = 199/446 (44.62%), Postives = 261/446 (58.52%), Query Frame = 1
Query:    1 LKAGKAEIFGIEMAANHEYLFSGAKFAVYTWYGCEVETTGPTLVAYQSS--ETPMIQYVNSHSQLEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVP-GVLAAAAMDQTTLSIEEGFTL--AAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADLTAGLPDAVVVVKVPRSGGVVQRDVEYRRRERATRIREYFYG--AGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRV-GGAQISDSMLPLGQASLLGPTRVARVRPTAELTHSLLAVCHPVLTPDGTVVGQEVAGGEDDERAA----QELLRSNAAGFVYVTEVNMETRRMTVLTPCPGALPSNYLFVGNIKWAE 1302
            LK G  E+ G+E+AA  EY F+GAK A+Y+W+GC++ET G     YQ+   ET     +N+HS LE RR  A      GR    GPRV+VVGP DSGK+ LA  L  YA R+GR PT+V+LD + G    P G +AAA + + TLS++EGF     APL + +G+  P ++P+LY  +V+ELA AV ++   D  A  AGLVV T  W++G G+  LL    A A D VLV+ HDRL+ADL   LP +V V K+PRSGGVVQRDV +RRR +  +I EYFYG  + A                      PL+P+  EL    VRV++V  G+   DSMLP+GQ S+L P +V  V  +  L H++LAVCHP    DG   G           AA    Q LL   AAGFV VT VN+E + +T+L PC G LPS  L +G ++W E
Sbjct:   30 LKQGLCEVLGVELAAGREYAFAGAKVALYSWHGCQLETRGECASVYQTGPGETTAAAALNAHSYLETRRDEASRADSCGRDC-RGPRVMVVGPSDSGKSTLAATLLGYAARLGREPTFVELDPALGDCGAPPGAVAAARVTRETLSVDEGFGSLDCAPLSYWFGYEAPREHPDLYARVVDELAVAVAEKLDGDRSANVAGLVVATSSWVDGDGFASLLRVASAFAVDAVLVLAHDRLFADLRQALPPSVAVAKLPRSGGVVQRDVVHRRRAKHRKIHEYFYGPQSHARSLLAKKDDDAALDKLLEATAPPLAPATHELPFRAVRVFKVLAGSTGDDSMLPVGQGSMLEPLQVVAVTVSPVLVHNVLAVCHPAR--DGDDAGDXXXXXXXAADAATSPHQHLLGCAAAGFVVVTNVNVEAQTITLLGPCSGDLPSRNLLLGKLEWME 472          
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: A0A485KVT1_9STRA (Protein CLP1 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVT1_9STRA)

HSP 1 Score: 330 bits (846), Expect = 3.210e-105
Identity = 182/435 (41.84%), Postives = 252/435 (57.93%), Query Frame = 1
Query:    1 LKAGKAEIFGIEMAANHEYLFSGAKFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQLEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADLTAGLPDAVV-VVKVPRSGGVVQRDVEYRRRERATRIREYFYGAGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRVGGAQISDSMLPLGQASLLGPTRVARVRPTAELTHSLLAVCHPVLTPDGTVVGQEVAGGEDDERAAQELLRSNAAGFVYVTEVNMETRRMTVLTPCPGALPSNYLFVGNIKWAE 1302
            L++G AE+FG+E+A + EY F   + A++TW+GCE+   G    +Y S ETPM   VN H+QL+  R +AL+          GPRV+V GP D+GK+ ++ +L  YA+RM   PT+VDLDV+ G ++VPG +AA  ++   LS+E+ F L APL + YGH    +NPELYK  V ELA  V+QR  ND +   +G+++NT  WI+  GYQ+LLH + A   D+VLV+G D+LY++L   L  +   V+K+PRS GVVQR  + R + R  R  EYFYG                           +P  +EL LDDV VYR+    +S+ MLP+GQ   +   RV     T +L H + AV HP             A  +DDE   Q LL S+AAGFV +  VN+ T +MT+L PCPG LPS  L VG +K+ E
Sbjct:   34 LRSGTAELFGVELAKDKEYHFRKCQLAIFTWHGCELHLQGQRASSYTSDETPMNAIVNIHAQLDQLRRQALDSKSA------GPRVLVTGPSDAGKSTVSRMLLNYALRMAMKPTFVDLDVAHGSLSVPGTIAATPLEMNCLSVEDEFILTAPLAYFYGHAEVKENPELYKYQVTELAKRVDQRLANDADVNASGVIINTSSWIDATGYQVLLHCIQAFNVDLVLVLGQDKLYSELARDLATSTASVIKLPRSDGVVQRSNQQRHQLRMDRFHEYFYGK------------RLHSTLPMQSPFEFAPHSVELDLDDVHVYRIQDLSVSNVMLPVGQTHDVQRLRVLPADKTTDLNHCIAAVSHPP---------HAKADSDDDE---QLLLGSSAAGFVQIKHVNVATGKMTLLVPCPGPLPSKNLIVGTLKFME 438          
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: A0A1Y1I0E8_KLENI (Protein CLP1 homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I0E8_KLENI)

HSP 1 Score: 330 bits (845), Expect = 5.460e-105
Identity = 188/447 (42.06%), Postives = 260/447 (58.17%), Query Frame = 1
Query:    1 LKAGKAEIFGIEMAANHEYLFSGA-KFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQLEARRTRALEELQTGRGAAN----GPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADLTAGL-----PDA--VVVVKVPRSGGVVQRDVEYRRRERATRIREYFYGAGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRVGGA-QISDSMLPLGQASLLGPTRVARVRPTAELTHSLLAVCHPVLTPDGTVVGQEVAGGEDDERAAQELLRSNAAGFVYVTEVNMETRRMTVLTPCPGALPSNYLFVGNIKWAE 1302
            L  G AEIFG E+A   E  + G  KFAV+TWYG  VE TG   V+Y + ETPM+ YVN+H+ LEARR  A E      GAA     GPR I+VGP DSGK+ L  IL  YA R+G  PT VDLD+  GQI++PG +AA  +D+    IE G+ + +PLV+ YGH  P++NP+LY+  VE+LAS +E+R     E R AG V+N  GW+E +GY+LLLHA+     DVVLV+G +RL++ L++       PD   + VVK+ +SGGVV R+ ++R+R R +R+REYFYG                          LSP  + +   DV++YR+GG  +   S LP+G  S   P +V  V  + +LTH++L + +                      +A++LL SN AGF+YVTEV+   R +T + P PG LP+N L  G++ W E
Sbjct:   40 LLEGVAEIFGTEIAQGQELHYRGGDKFAVFTWYGATVEITGQPEVSYVADETPMVSYVNTHAVLEARRQSAREASSVDGGAAGEETQGPRTIIVGPTDSGKSTLCKILLTYAARLGWKPTLVDLDIGQGQISIPGTIAATLVDKPVDPIE-GYEMESPLVYFYGHVSPSENPDLYRTQVEQLASMLERRFAGSAEYRNAGAVINAMGWVESLGYELLLHAIETFRIDVVLVIGQERLFSQLSSQFHGRTRPDGSRIDVVKLNKSGGVVNRNPKHRQRTRTSRVREYFYGIAG----------------------DLSPHAMTVSFADVQIYRIGGGPKAPSSALPVGAQSHADPIKVTHVSISKDLTHAVLGISYAA--------------------SAEQLLSSNVAGFIYVTEVDTMKRTLTYVAPSPGPLPNNLLLAGSLMWVE 443          
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: A0A6A4FNY2_9STRA (Protein CLP1 homolog n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FNY2_9STRA)

HSP 1 Score: 329 bits (843), Expect = 9.620e-105
Identity = 194/441 (43.99%), Postives = 259/441 (58.73%), Query Frame = 1
Query:    1 LKAGKAEIFGIEMAANHEYLFSGAKFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQLEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADLTAGLPDAVV------VVKVPRSGGVVQRDVEYRRRERATRIREYFYGAGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRVGGAQISDSMLPLGQASL-LGPTRVARVRPTAELTHSLLAVCHPVLTPDGTVVGQEVAGGEDDERAAQELLRSNAAGFVYVTEVNMETRRMTVLTPCPGALPSNYLFVGNIKWAE 1302
            LK+G AE+FG+E+A +  Y+F   K A++TWYGC +E  G   VAY S ETPM  Y+N H+QL+ RR     EL   + AA GPRV+V GP DSGK+ LA IL  YA+R+G  PT V+LDV  G ++VPG LAA+ +D   LSIEE F L  PL + YGH   ++N EL++   ++LA+AV++R  ND E   AG VVNTCGW++G G+ LL+ A+     DVVLV+G DRLY+ L + L  A        +VK+ RSGGVV  + + R   R + IREYFYGA +                       LSP + E   DDV  Y +   ++SD MLP+GQ        RV  V  TA+L HSL AV HP   P G    Q+ +     + +   LL + AAGFV++ EV +  +++ +L P PG LPS  L VG+IKW E
Sbjct:   31 LKSGSAELFGVELAIDRSYVFHDRKLAIFTWYGCTLEVRGAPEVAYTSEETPMDSYLNIHAQLQRRR-----ELARAKRAA-GPRVLVCGPADSGKSTLAQILVNYALRLGEKPTLVELDVGHGCLSVPGTLAASPLDMNALSIEEDFVLTNPLAYFYGHAACSENVELFRYQQQQLAAAVKRRLANDEEVNAAGCVVNTCGWVDGTGFDLLVQAIRDFDVDVVLVIGQDRLYSRLQSALTGANANGVDRSIVKLARSGGVVPLNNKLRSAARISCIREYFYGAHS----------------LSVAIPTLSPCINEFSFDDVSFYAIKDMKVSDVMLPVGQVETQTDRLRVVPVEKTADLGHSLAAVAHP---PHG----QDTSSLSSTDLSW--LLSAPAAGFVFIKEVRVAEQKLVLLVPSPGPLPSRNLLVGSIKWME 440          
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: H3GV05_PHYRM (Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=H3GV05_PHYRM)

HSP 1 Score: 328 bits (842), Expect = 1.280e-104
Identity = 190/441 (43.08%), Postives = 255/441 (57.82%), Query Frame = 1
Query:    1 LKAGKAEIFGIEMAANHEYLFSGAKFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQLEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADLTAGLPDAVV------VVKVPRSGGVVQRDVEYRRRERATRIREYFYGAGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRVGGAQISDSMLPLGQASLLGPT-RVARVRPTAELTHSLLAVCHPVLTPDGTVVGQEVAGGEDDERAAQELLRSNAAGFVYVTEVNMETRRMTVLTPCPGALPSNYLFVGNIKWAE 1302
            LK+G AE+FG+E+A + EY F   K A++TWYGC +E  G   VAY S +T M  Y+N H+QL+ RR     EL   + AA GPRV+V GP DSGK+ L  ILA YA+R+G  PT V+LDV  G ++VPG L+A+ +D  +LSIEE F L  PL F YGH   ++N EL++   ++LA AV++R  ND E   +G V+NTCGW++G+G+ LLLHA+     DVVLV+G DRL++ L + L  A        +VK+ RSGGVV  + + R   R + IREYFYGA +                       LSP + E   DDV  Y +   ++SD MLP+GQ        RV  V  TA+L HSL AV HP    D T                  LL + AAGFV++ EV +  +++ +L P PG LPS  L +G+IKW E
Sbjct:   29 LKSGSAELFGVELAIDREYTFRDRKLAIFTWYGCTLEVRGAPEVAYTSEDTTMDSYLNIHAQLQRRR-----ELAKAKHAA-GPRVLVCGPVDSGKSTLTHILANYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSIEEDFILTNPLAFFYGHAAASENVELFRYQQQQLAKAVKRRLANDEEVNASGCVINTCGWVDGMGFDLLLHAIKEFEVDVVLVIGQDRLFSRLQSSLTGANANGVDRSIVKLSRSGGVVPLNSKLRSAARISCIREYFYGAHS----------------LSVAISTLSPCINEFSFDDVSFYMIKDMKVSDVMLPVGQVETQSDRLRVVPVEKTADLGHSLAAVAHPQHGQDAT---------SSSATDLSWLLGAPAAGFVFIKEVRVAEQKLVLLVPSPGPLPSRNLLLGSIKWME 438          
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Match: K3W9W5_GLOUD (Protein CLP1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9W5_GLOUD)

HSP 1 Score: 327 bits (839), Expect = 3.280e-104
Identity = 180/440 (40.91%), Postives = 258/440 (58.64%), Query Frame = 1
Query:    1 LKAGKAEIFGIEMAANHEYLFSGAKFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQLEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGRTPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTHPADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLLLHAVGALAADVVLVMGHDRLYADL-----TAGLPDAVVVVKVPRSGGVVQRDVEYRRRERATRIREYFYGAGAGGAXXXXXXXXXXXXXXXXXXXPLSPSVLELKLDDVRVYRVGGAQISDSMLPLGQAS-LLGPTRVARVRPTAELTHSLLAVCHPVLTPDGTVVGQEVAGGEDDERAAQELLRSNAAGFVYVTEVNMETRRMTVLTPCPGALPSNYLFVGNIKWAE 1302
            LK+G AE+FG+E+A +HEY     K AV+TWYGC +E  G   VAY S ETPM  Y+N H+QL+ RR  A  +       ++GPRV+V GP DSGK+ L  IL  YA+R+G  PT V+LDV  G ++VPG +AA+ +D  ++S+EE F L  PL + +GH   +DNPEL+   + +LASAV++R  ND E   +G ++NT GW++G+GY LL+ ++     DVVLV+G DRL++ L     ++G   ++ +VK+ RSGGVV  + ++R  +R  RIREYFYG  +                        SP + E+  DDV  + +   ++SD MLP+GQ    L   RV +V  T EL  S+ AV HP  + D       ++           LL S AAGFV++ EV  + +++ +L P PG LPS  L +G+IKW E
Sbjct:   28 LKSGSAELFGVELAIDHEYTLRDKKVAVFTWYGCTLEVQGERDVAYSSEETPMNSYLNIHAQLQRRRELAAVKR------SSGPRVLVAGPVDSGKSTLTQILTNYALRLGEKPTLVELDVGVGSLSVPGTIAASPLDMNSISVEEEFVLTNPLAYFFGHAAQSDNPELFHHQMRQLASAVQRRMDNDAEVNASGCIINTSGWVDGLGYDLLVESIQVFEIDVVLVIGQDRLFSRLQSSFASSGASQSLSIVKLARSGGVVPLNSKHRSAKRLGRIREYFYGPNS----------------LSLAVPTHSPCITEISFDDVDFFAIKDMKVSDVMLPVGQTEDKLDRLRVVKVEKTQELLLSIAAVAHPKRSQDRDSSAANLSW----------LLNSPAAGFVFIKEVREDEKKLVLLVPSPGPLPSRNLILGSIKWLE 435          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13415.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJV7_9STRA3.030e-15755.50Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID... [more]
D8LR58_ECTSI4.710e-15456.98Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KLD2_9PHAE9.470e-11955.38Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A3R7G6W1_9STRA2.460e-10743.76Protein CLP1 homolog n=3 Tax=Phytophthora kernovia... [more]
F0YC73_AURAN8.210e-10744.62Protein CLP1 homolog n=1 Tax=Aureococcus anophagef... [more]
A0A485KVT1_9STRA3.210e-10541.84Protein CLP1 homolog n=1 Tax=Aphanomyces stellatus... [more]
A0A1Y1I0E8_KLENI5.460e-10542.06Protein CLP1 homolog n=1 Tax=Klebsormidium nitens ... [more]
A0A6A4FNY2_9STRA9.620e-10543.99Protein CLP1 homolog n=1 Tax=Phytophthora rubi Tax... [more]
H3GV05_PHYRM1.280e-10443.08Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4... [more]
K3W9W5_GLOUD3.280e-10440.91Protein CLP1 homolog n=1 Tax=Globisporangium ultim... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13415contigP-wetherbeei_contig13415:151..1818 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LR58
Preferred nameCLP1
PFAMsCLP1_N,CLP1_P,Clp1
Model size1505
Max annot lvl2759|Eukaryota
KEGG koko:K14399
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000214,GO:0000375,GO:0000377,GO:0000394,GO:0000398,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006366,GO:0006369,GO:0006378,GO:0006379,GO:0006388,GO:0006396,GO:0006397,GO:0006399,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009117,GO:0009791,GO:0009892,GO:0009908,GO:0009987,GO:0010228,GO:0010467,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016301,GO:0016310,GO:0016441,GO:0016458,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019205,GO:0019222,GO:0019438,GO:0019637,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021549,GO:0021695,GO:0021953,GO:0022008,GO:0022037,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030182,GO:0030423,GO:0030554,GO:0030902,GO:0031047,GO:0031123,GO:0031124,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035087,GO:0035194,GO:0035639,GO:0036094,GO:0040029,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046939,GO:0048367,GO:0048513,GO:0048519,GO:0048608,GO:0048699,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0050789,GO:0051731,GO:0051732,GO:0051733,GO:0051734,GO:0051736,GO:0055086,GO:0060255,GO:0060322,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0070922,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090567,GO:0097159,GO:0097367,GO:0097659,GO:0099402,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1902555,GO:1905348
Exons2
Evalue4.64e-151
EggNOG OGsCOG5623@1|root,KOG2749@2759|Eukaryota
Ec32 ortholog descriptionPre-mRNA cleavage complex II Clp1
Ec32 orthologEc-06_004260.1
EC2.7.1.78
DescriptionmRNA 3'-end processing
Cds size1269
COG categoryA
BRITEko00000,ko00001,ko01000,ko03019
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185984.4382474-UTR-P-wetherbeei_contig13415:150..3501683185984.4382474-UTR-P-wetherbeei_contig13415:150..350Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13415 151..350 -
1683185984.4705288-UTR-P-wetherbeei_contig13415:1782..18181683185984.4705288-UTR-P-wetherbeei_contig13415:1782..1818Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13415 1783..1818 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185984.4511852-CDS-P-wetherbeei_contig13415:350..14901683185984.4511852-CDS-P-wetherbeei_contig13415:350..1490Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13415 351..1490 -
1683185984.4610085-CDS-P-wetherbeei_contig13415:1653..17821683185984.4610085-CDS-P-wetherbeei_contig13415:1653..1782Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13415 1654..1782 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13415.1.1prot_P-wetherbeei_contig13415.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13415 351..1782 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13415.1.1

>prot_P-wetherbeei_contig13415.1.1 ID=prot_P-wetherbeei_contig13415.1.1|Name=mRNA_P-wetherbeei_contig13415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=423bp
MAANHEYLFSGAKFAVYTWYGCEVETTGPTLVAYQSSETPMIQYVNSHSQ
LEARRTRALEELQTGRGAANGPRVIVVGPPDSGKTALACILAAYAVRMGR
TPTYVDLDVSAGQITVPGVLAAAAMDQTTLSIEEGFTLAAPLVFHYGHTH
PADNPELYKLLVEELASAVEQRQTNDPEARTAGLVVNTCGWIEGVGYQLL
LHAVGALAADVVLVMGHDRLYADLTAGLPDAVVVVKVPRSGGVVQRDVEY
RRRERATRIREYFYGAGAGGAAAGAGGGSGGPLGRPAAAPPLSPSVLELK
LDDVRVYRVGGAQISDSMLPLGQASLLGPTRVARVRPTAELTHSLLAVCH
PVLTPDGTVVGQEVAGGEDDERAAQELLRSNAAGFVYVTEVNMETRRMTV
LTPCPGALPSNYLFVGNIKWAE*
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mRNA from alignment at P-wetherbeei_contig13415:151..1818-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13415.1.1 ID=mRNA_P-wetherbeei_contig13415.1.1|Name=mRNA_P-wetherbeei_contig13415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1668bp|location=Sequence derived from alignment at P-wetherbeei_contig13415:151..1818- (Phaeothamnion wetherbeei SAG_119_79)
CTCAAGGCCGGCAAGGCGGAGATCTTCGGCATTGAGATGGCCGCCAACCA TGAGTACCTCTTTAGTGGCGCCAAGTTCGCCGTCTACACATGGTACGGAT GCGAGGTCGAGACGACAGGGCCAACACTTGTCGCCTATCAGTCCTCCGAA ACGCCCATGATTCAGGTGCGGAGAGAAGGGAAGAGAATGCCACATCTACT TCCTTTTCGAAGCTGCTGCGTCGCTCGGGCAAGTTATTCACGAGTCCAAA CGTCTACGTGCTGCTCTTGACTCCTCCCTATTTTTCCTCTTTGCGCTGCG CCACATTTTCCTTGCACGTTACAAACAGTACGTCAACAGCCACTCGCAGC TGGAGGCGCGCCGCACGCGGGCGCTGGAGGAGCTGCAGACAGGCCGCGGT GCCGCCAACGGCCCCCGGGTCATCGTCGTCGGCCCGCCGGACAGCGGCAA GACGGCCCTCGCGTGCATCCTGGCGGCGTACGCTGTTCGGATGGGGCGGA CGCCGACCTACGTCGACCTGGACGTCTCCGCTGGGCAGATCACGGTCCCG GGCGTGCTAGCAGCGGCCGCCATGGACCAGACCACGCTCTCCATCGAGGA AGGGTTCACGCTGGCGGCGCCGCTCGTCTTTCACTACGGGCACACGCATC CGGCCGACAATCCGGAGCTCTACAAGCTGCTGGTGGAGGAGTTGGCGTCG GCGGTGGAGCAGCGACAGACAAATGATCCCGAGGCACGCACGGCGGGCCT CGTCGTCAACACCTGCGGCTGGATCGAAGGGGTCGGCTACCAGCTGCTGC TGCACGCCGTCGGCGCGCTGGCGGCCGACGTGGTCCTGGTGATGGGCCAC GACCGGCTTTACGCCGACCTGACGGCCGGCCTGCCCGACGCCGTCGTCGT GGTCAAAGTGCCTCGGTCCGGCGGCGTCGTGCAGCGCGATGTCGAATACC GCCGTCGCGAGCGCGCCACGCGCATCCGCGAGTACTTCTACGGCGCCGGC GCCGGCGGCGCAGCTGCCGGCGCCGGTGGCGGCAGTGGCGGGCCGCTGGG GCGACCGGCGGCGGCGCCGCCGCTCAGCCCGAGCGTGCTGGAGCTCAAGC TGGACGACGTGCGCGTCTATCGCGTGGGCGGTGCGCAGATCAGCGACAGC ATGTTGCCGCTGGGGCAGGCGAGCCTGCTGGGCCCGACGCGGGTCGCGCG CGTCCGGCCAACGGCCGAGCTGACGCACAGCCTGCTGGCCGTATGCCATC CTGTGCTGACTCCGGACGGGACGGTGGTCGGGCAGGAAGTCGCTGGCGGG GAGGACGACGAGCGGGCCGCGCAGGAGCTGCTTCGGTCGAACGCCGCGGG CTTCGTGTACGTGACCGAAGTCAATATGGAGACGCGGCGGATGACCGTGC TGACGCCTTGCCCCGGGGCGCTGCCAAGCAACTATCTCTTCGTCGGGAAC ATTAAATGGGCAGAGTGAATGATCTTACCTGGTGGAGCGGAAGGAAAGGA GTTTAACGACGCGGGTCGGCCAGCCAAGCGGCGGTGGGAGGCGGCGGGCA GCGACGGCGGCAGTGGCTGGCGGCGGCAATTCGTTGACCCTCTGGCTGGG GGAGGGGGCTGGAAACGTTATTACCACACCAATCACAATACGTTATTAAT GAATCGTTTTACGGCGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13415:151..1818-

>mRNA_P-wetherbeei_contig13415.1.1 ID=mRNA_P-wetherbeei_contig13415.1.1|Name=mRNA_P-wetherbeei_contig13415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1269bp|location=Sequence derived from alignment at P-wetherbeei_contig13415:151..1818- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGCCAACCATGAGTACCTCTTTAGTGGCGCCAAGTTCGCCGTCTA
CACATGGTACGGATGCGAGGTCGAGACGACAGGGCCAACACTTGTCGCCT
ATCAGTCCTCCGAAACGCCCATGATTCAGTACGTCAACAGCCACTCGCAG
CTGGAGGCGCGCCGCACGCGGGCGCTGGAGGAGCTGCAGACAGGCCGCGG
TGCCGCCAACGGCCCCCGGGTCATCGTCGTCGGCCCGCCGGACAGCGGCA
AGACGGCCCTCGCGTGCATCCTGGCGGCGTACGCTGTTCGGATGGGGCGG
ACGCCGACCTACGTCGACCTGGACGTCTCCGCTGGGCAGATCACGGTCCC
GGGCGTGCTAGCAGCGGCCGCCATGGACCAGACCACGCTCTCCATCGAGG
AAGGGTTCACGCTGGCGGCGCCGCTCGTCTTTCACTACGGGCACACGCAT
CCGGCCGACAATCCGGAGCTCTACAAGCTGCTGGTGGAGGAGTTGGCGTC
GGCGGTGGAGCAGCGACAGACAAATGATCCCGAGGCACGCACGGCGGGCC
TCGTCGTCAACACCTGCGGCTGGATCGAAGGGGTCGGCTACCAGCTGCTG
CTGCACGCCGTCGGCGCGCTGGCGGCCGACGTGGTCCTGGTGATGGGCCA
CGACCGGCTTTACGCCGACCTGACGGCCGGCCTGCCCGACGCCGTCGTCG
TGGTCAAAGTGCCTCGGTCCGGCGGCGTCGTGCAGCGCGATGTCGAATAC
CGCCGTCGCGAGCGCGCCACGCGCATCCGCGAGTACTTCTACGGCGCCGG
CGCCGGCGGCGCAGCTGCCGGCGCCGGTGGCGGCAGTGGCGGGCCGCTGG
GGCGACCGGCGGCGGCGCCGCCGCTCAGCCCGAGCGTGCTGGAGCTCAAG
CTGGACGACGTGCGCGTCTATCGCGTGGGCGGTGCGCAGATCAGCGACAG
CATGTTGCCGCTGGGGCAGGCGAGCCTGCTGGGCCCGACGCGGGTCGCGC
GCGTCCGGCCAACGGCCGAGCTGACGCACAGCCTGCTGGCCGTATGCCAT
CCTGTGCTGACTCCGGACGGGACGGTGGTCGGGCAGGAAGTCGCTGGCGG
GGAGGACGACGAGCGGGCCGCGCAGGAGCTGCTTCGGTCGAACGCCGCGG
GCTTCGTGTACGTGACCGAAGTCAATATGGAGACGCGGCGGATGACCGTG
CTGACGCCTTGCCCCGGGGCGCTGCCAAGCAACTATCTCTTCGTCGGGAA
CATTAAATGGGCAGAGTGA
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