mRNA_P-wetherbeei_contig134.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig134.5.1
Unique NamemRNA_P-wetherbeei_contig134.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig134.5.1 vs. uniprot
Match: A0A6H5KKU1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKU1_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 4.490e-36
Identity = 108/313 (34.50%), Postives = 143/313 (45.69%), Query Frame = 1 
Query:    7 FELVCTHGA-LRLYAGVGMFWGGMAVRLLIEGEVAAPPAYVHRRLAAMTAPGGAYYPFSDAASCDVLGGSGSGGXXXXXXXXXXXXXQAAGGRRTLGGALGRAMTIDVTCAHWT-HFAGARRCAMIRFVVGGSGSGIGSDLDSEVSAPDHVADAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSSAAADLRPTIVFATIDHPILREWMLPAQEIEVFPSGIVLDSLKADSAGPQAAAAEAAAGGGKRSGAGTRVQILLGWDSKGALQSFAKMAFLAERAERLEALDGHLRTIEEDY 939
            + LV + G  LRLYA   MFWGG A+RL +E EVA P  +  R LA++TA GG YYP+SD   CD++  S                           GAL       V C+HWT + +G RRC ++R+V              + S P  VAD  +                                            +    D RPTIVF TI+HPI+REW L   ++EVFPSG+VL+ +++  AGP                  TRV  L+GWD+KG LQ  AKM+++ ERA+RLE L  HLR +E  Y
Sbjct:  265 YNLVASSGDNLRLYAAANMFWGGQAIRLRVEMEVAVPLGFAMRWLASLTARGGVYYPYSDTVPCDMVESS--------------------------NGAL------SVACSHWTTNLSGTRRCTLLRYV------------SEDGSPPPGVADDPSL-------------------------------------------AGKPRDSRPTIVFTTIEHPIMREWALAGVDVEVFPSGLVLEEMESP-AGPV-----------------TRVHGLIGWDNKGTLQHMAKMSYMTERADRLEGLGQHLRAMERGY 472
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig134.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKU1_9PHAE4.490e-3634.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig134contigP-wetherbeei_contig134:10369..12188 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LNH7
PFAMsDUF3480,FYVE,PI3K_C2,PI3Ka,PI3_PI4_kinase
Model size1693
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K00914,ko:K04679
KEGG ReactionR03362
KEGG Pathwayko00562,ko01100,ko04070,ko04136,ko04138,ko04140,ko04144,ko04145,ko04350,ko04371,ko05152,ko05167,map00562,map01100,map04070,map04136,map04138,map04140,map04144,map04145,map04350,map04371,map05152,map05167
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005543,GO:0008289,GO:0032266,GO:0035091,GO:0043167,GO:0043168,GO:1901981
Exons2
Evalue2.22e-32
EggNOG OGsCOG5032@1|root,KOG1841@1|root,KOG0906@2759|Eukaryota,KOG1841@2759|Eukaryota
EC2.7.1.137
Description1-phosphatidylinositol binding
Cds size1689
COG categoryS
BRITEko00000,ko00001,ko01000,ko01009,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185983.7322557-CDS-P-wetherbeei_contig134:10368..118171683185983.7322557-CDS-P-wetherbeei_contig134:10368..11817Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig134 10369..11817 +
1683185983.7414567-CDS-P-wetherbeei_contig134:11946..121861683185983.7414567-CDS-P-wetherbeei_contig134:11946..12186Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig134 11947..12186 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig134.5.1prot_P-wetherbeei_contig134.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig134 10369..12186 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig134.5.1

>prot_P-wetherbeei_contig134.5.1 ID=prot_P-wetherbeei_contig134.5.1|Name=mRNA_P-wetherbeei_contig134.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=563bp
DDFELVCTHGALRLYAGVGMFWGGMAVRLLIEGEVAAPPAYVHRRLAAMT
APGGAYYPFSDAASCDVLGGSGSGGAGSSGCGGGGGAGQAAGGRRTLGGA
LGRAMTIDVTCAHWTHFAGARRCAMIRFVVGGSGSGIGSDLDSEVSAPDH
VADAAAATATTTGATKKTAAAKTAAPAPVAALPATAAAAARAAAAAAVQN
SSAAADLRPTIVFATIDHPILREWMLPAQEIEVFPSGIVLDSLKADSAGP
QAAAAEAAAGGGKRSGAGTRVQILLGWDSKGALQSFAKMAFLAERAERLE
ALDGHLRTIEEDYSREYGLALPERPARGQVAAATTEIGRGAGGANAAAGI
ARREDQGQQGLLPREAGSRSPPLWPFDSVPPTRNGVIAIGAVPARGGIGE
NGSVGGSGNGSSSRDPAAGAGVESEVAVLRRRLRASDDARLRLESELALT
RAAAAARDADATAALAETERTLAMKEIELAASQAEALGLRRELEMERSDL
IGGRAIRRPSRSSSLAIAATGRGSGSGVAASGVHRIELPLSDGDATPPAM
PSSPAVRGPPMRG
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mRNA from alignment at P-wetherbeei_contig134:10369..12188+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig134.5.1 ID=mRNA_P-wetherbeei_contig134.5.1|Name=mRNA_P-wetherbeei_contig134.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1820bp|location=Sequence derived from alignment at P-wetherbeei_contig134:10369..12188+ (Phaeothamnion wetherbeei SAG_119_79)
GATGACTTTGAGCTGGTGTGCACGCACGGCGCGCTGCGGCTTTATGCCGG
CGTGGGCATGTTTTGGGGTGGAATGGCCGTCCGGCTCCTGATCGAGGGGG
AAGTGGCGGCACCGCCGGCGTATGTACACAGGCGACTCGCCGCCATGACA
GCGCCCGGCGGCGCATACTACCCGTTCAGCGACGCAGCGTCCTGCGACGT
CCTCGGCGGCAGCGGTAGTGGCGGCGCTGGCAGCAGCGGCTGCGGCGGCG
GAGGCGGCGCTGGTCAAGCTGCGGGCGGAAGAAGGACTCTGGGAGGCGCT
TTGGGCCGGGCTATGACGATAGATGTGACGTGTGCCCACTGGACGCATTT
CGCGGGCGCTCGCCGCTGCGCGATGATCCGGTTCGTCGTTGGCGGCAGCG
GCAGCGGTATCGGCAGCGATCTTGACTCAGAGGTCTCAGCGCCAGATCAC
GTGGCCGACGCTGCGGCTGCAACAGCGACAACAACTGGCGCAACCAAAAA
GACGGCAGCGGCAAAGACGGCGGCACCGGCACCAGTGGCGGCGTTGCCAG
CCACCGCCGCCGCGGCTGCAAGGGCGGCGGCCGCCGCGGCAGTGCAGAAC
TCCTCTGCCGCGGCGGACCTGCGACCGACCATCGTCTTTGCGACGATCGA
CCACCCCATCCTGCGGGAGTGGATGCTTCCGGCGCAAGAGATCGAGGTGT
TCCCGTCCGGCATCGTCTTGGATAGCCTGAAAGCAGACTCTGCTGGACCG
CAGGCGGCGGCGGCGGAGGCGGCAGCCGGAGGCGGGAAGAGGAGCGGTGC
CGGCACCCGCGTACAGATCCTGCTCGGGTGGGACAGCAAGGGCGCGCTTC
AAAGCTTCGCAAAGATGGCGTTCCTCGCCGAGCGCGCTGAGCGCCTGGAA
GCACTCGACGGCCATTTGCGCACCATCGAGGAGGACTACTCCCGCGAGTA
CGGGCTTGCTCTTCCTGAGCGGCCCGCACGAGGTCAGGTGGCAGCGGCGA
CGACGGAAATAGGGCGAGGCGCAGGAGGCGCCAATGCGGCGGCGGGCATT
GCTCGTCGCGAAGACCAGGGCCAGCAGGGGCTCTTGCCACGCGAAGCGGG
CTCACGTTCACCCCCGCTCTGGCCCTTCGACTCCGTACCTCCAACGCGCA
ACGGCGTCATAGCCATCGGCGCCGTACCGGCGCGAGGAGGGATCGGCGAA
AATGGCAGCGTCGGTGGCAGCGGCAACGGCAGCAGCAGCAGGGATCCTGC
GGCCGGCGCAGGAGTGGAGTCGGAAGTGGCGGTGCTGCGGCGACGCCTGC
GGGCGAGCGATGATGCCCGATTGCGGCTGGAATCGGAGCTGGCGCTGACA
CGGGCCGCCGCCGCCGCCCGCGATGCTGATGCGACGGCAGCGTTGGCGGA
GACGGAGCGCACGCTGGCGATGAAGGAGATCGAGCTTGCGGCGTCACAGG
TGTTGTGTACGGCATTTTCGGCTTTTCTCAAGTGTTCTTTGACCACAACG
CTTGCTGCGCTCTTGGCGCTAAAATTAATAACGAGTTCCCTTTGTTCTTC
CGGAAAACTAATGGCTCGCATACGTCAGGCGGAGGCGTTGGGGCTGCGGC
GGGAACTCGAAATGGAGCGCTCCGATCTGATCGGCGGCAGGGCCATCCGC
CGGCCGTCCCGGTCGTCCTCGCTCGCCATCGCCGCCACCGGCCGCGGCAG
CGGCTCTGGCGTCGCGGCTTCGGGCGTGCACAGGATCGAGCTGCCTTTGT
CGGACGGCGACGCGACGCCGCCGGCCATGCCATCGTCGCCGGCCGTCCGG
GGCCCGCCGATGCGGGGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig134:10369..12188+

>mRNA_P-wetherbeei_contig134.5.1 ID=mRNA_P-wetherbeei_contig134.5.1|Name=mRNA_P-wetherbeei_contig134.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1689bp|location=Sequence derived from alignment at P-wetherbeei_contig134:10369..12188+ (Phaeothamnion wetherbeei SAG_119_79)
GATGACTTTGAGCTGGTGTGCACGCACGGCGCGCTGCGGCTTTATGCCGG
CGTGGGCATGTTTTGGGGTGGAATGGCCGTCCGGCTCCTGATCGAGGGGG
AAGTGGCGGCACCGCCGGCGTATGTACACAGGCGACTCGCCGCCATGACA
GCGCCCGGCGGCGCATACTACCCGTTCAGCGACGCAGCGTCCTGCGACGT
CCTCGGCGGCAGCGGTAGTGGCGGCGCTGGCAGCAGCGGCTGCGGCGGCG
GAGGCGGCGCTGGTCAAGCTGCGGGCGGAAGAAGGACTCTGGGAGGCGCT
TTGGGCCGGGCTATGACGATAGATGTGACGTGTGCCCACTGGACGCATTT
CGCGGGCGCTCGCCGCTGCGCGATGATCCGGTTCGTCGTTGGCGGCAGCG
GCAGCGGTATCGGCAGCGATCTTGACTCAGAGGTCTCAGCGCCAGATCAC
GTGGCCGACGCTGCGGCTGCAACAGCGACAACAACTGGCGCAACCAAAAA
GACGGCAGCGGCAAAGACGGCGGCACCGGCACCAGTGGCGGCGTTGCCAG
CCACCGCCGCCGCGGCTGCAAGGGCGGCGGCCGCCGCGGCAGTGCAGAAC
TCCTCTGCCGCGGCGGACCTGCGACCGACCATCGTCTTTGCGACGATCGA
CCACCCCATCCTGCGGGAGTGGATGCTTCCGGCGCAAGAGATCGAGGTGT
TCCCGTCCGGCATCGTCTTGGATAGCCTGAAAGCAGACTCTGCTGGACCG
CAGGCGGCGGCGGCGGAGGCGGCAGCCGGAGGCGGGAAGAGGAGCGGTGC
CGGCACCCGCGTACAGATCCTGCTCGGGTGGGACAGCAAGGGCGCGCTTC
AAAGCTTCGCAAAGATGGCGTTCCTCGCCGAGCGCGCTGAGCGCCTGGAA
GCACTCGACGGCCATTTGCGCACCATCGAGGAGGACTACTCCCGCGAGTA
CGGGCTTGCTCTTCCTGAGCGGCCCGCACGAGGTCAGGTGGCAGCGGCGA
CGACGGAAATAGGGCGAGGCGCAGGAGGCGCCAATGCGGCGGCGGGCATT
GCTCGTCGCGAAGACCAGGGCCAGCAGGGGCTCTTGCCACGCGAAGCGGG
CTCACGTTCACCCCCGCTCTGGCCCTTCGACTCCGTACCTCCAACGCGCA
ACGGCGTCATAGCCATCGGCGCCGTACCGGCGCGAGGAGGGATCGGCGAA
AATGGCAGCGTCGGTGGCAGCGGCAACGGCAGCAGCAGCAGGGATCCTGC
GGCCGGCGCAGGAGTGGAGTCGGAAGTGGCGGTGCTGCGGCGACGCCTGC
GGGCGAGCGATGATGCCCGATTGCGGCTGGAATCGGAGCTGGCGCTGACA
CGGGCCGCCGCCGCCGCCCGCGATGCTGATGCGACGGCAGCGTTGGCGGA
GACGGAGCGCACGCTGGCGATGAAGGAGATCGAGCTTGCGGCGTCACAGG
CGGAGGCGTTGGGGCTGCGGCGGGAACTCGAAATGGAGCGCTCCGATCTG
ATCGGCGGCAGGGCCATCCGCCGGCCGTCCCGGTCGTCCTCGCTCGCCAT
CGCCGCCACCGGCCGCGGCAGCGGCTCTGGCGTCGCGGCTTCGGGCGTGC
ACAGGATCGAGCTGCCTTTGTCGGACGGCGACGCGACGCCGCCGGCCATG
CCATCGTCGCCGGCCGTCCGGGGCCCGCCGATGCGGGGC
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