mRNA_P-wetherbeei_contig13227.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13227.3.1
Unique NamemRNA_P-wetherbeei_contig13227.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: A0A835YTG5_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG5_9STRA)

HSP 1 Score: 335 bits (860), Expect = 2.930e-109
Identity = 169/242 (69.83%), Postives = 202/242 (83.47%), Query Frame = 1
Query:    1 PESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGG----------LIEQQDALPPHRLLTLVQQAVAYQIEFCRYHPRVTPRVSTLARDFQLVVVPNRQRDLFV 696
            P  AL+P +PQI+ D++RMI QYLH+E +F S MV+QDEANM+T+EQQ+RRAQSKRLRKAV+EG W++A SL  K LPRQHHKRYLYALYRQEY+ELIE+QEYQKAFAYLNRRLKPME+TAAS PTEFQ+LCYLLTCKSV D+PHF GW+GVMAGRE+L+D+LARLVE+E G           L +    +PP RL+TL+QQAVAYQ+EF RYHPR+ P V++LARD+Q  VVPN QRDLFV
Sbjct:   20 PRDALDPRNPQIKRDIIRMIAQYLHNESYFASLMVLQDEANMKTSEQQSRRAQSKRLRKAVLEGDWDVAASLA-KNLPRQHHKRYLYALYRQEYMELIEKQEYQKAFAYLNRRLKPMEATAASNPTEFQNLCYLLTCKSVADSPHFMGWEGVMAGREKLSDELARLVEVEGGAAAAVPSAGASLADASQEIPPDRLVTLLQQAVAYQMEFRRYHPRMVPEVTSLARDYQCPVVPNVQRDLFV 260          
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: A0A6H5KDG3_9PHAE (CTLH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDG3_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 4.030e-84
Identity = 132/206 (64.08%), Postives = 164/206 (79.61%), Query Frame = 1
Query:    1 PESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGGLIEQQDALPPHRLLTLVQQAVAYQIEFCRYHPR 618
            P   L+ S PQI+ D+L MIVQYL  E+ F +A+V+QDEANM+T EQQARRAQ  RLR A +EG W+  ++L+TK L R H KR+ YA+YRQEYLELIERQEYQ+AFA+LNRRLKPME+TAASTP EF +LCYLLTCKSV DA HFR W GV+ GRE+LA++LARLVE E+  L      +PP+RL+TL++QAVA+QIE  RY+P+
Sbjct:   62 PTGTLDASDPQIKQDVLAMIVQYLRSEKLFMAAVVIQDEANMKTAEQQARRAQGSRLRTATLEGDWKAVINLITKNLSRLHQKRFYYAVYRQEYLELIERQEYQRAFAFLNRRLKPMEATAASTPNEFLNLCYLLTCKSVSDAGHFRSWGGVLGGREKLAEELARLVEAETVSLAHPSQ-MPPNRLVTLLEQAVAFQIESGRYNPK 266          
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: D7G553_ECTSI (WD40 repeat-containing protein SMU1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G553_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 4.860e-83
Identity = 133/206 (64.56%), Postives = 163/206 (79.13%), Query Frame = 1
Query:    1 PESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGGLIEQQDALPPHRLLTLVQQAVAYQIEFCRYHPR 618
            P   L+ S PQI+ D+L MIVQYL  E+ F +A+V+QDEANM+T EQQARRAQ  RLRKA +EG W   +SL+TK L R H KR+ YA+YRQEYLELIERQEYQ+AF +LNRRLKPME+TAASTP EF +LCYLLTCKSV DA HFR W GV+ GRE+LA++LARLVE E+  L      +PP+RL+TL++QAVA+QIE  RY+P+
Sbjct:   61 PTGTLDASDPQIKQDVLSMIVQYLRSEKLFMAAVVIQDEANMKTAEQQARRAQGSRLRKATLEGDWSAVISLITKNLSRLHQKRFYYAVYRQEYLELIERQEYQRAFVFLNRRLKPMEATAASTPNEFLNLCYLLTCKSVSDAGHFRSWGGVLGGREKLAEELARLVEAETVSLAHPSQ-MPPNRLVTLLEQAVAFQIESGRYNPK 265          
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: A0A0L0HFU0_SPIPD (WD40 repeat-containing protein SMU1 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HFU0_SPIPD)

HSP 1 Score: 234 bits (597), Expect = 2.140e-69
Identity = 123/258 (47.67%), Postives = 175/258 (67.83%), Query Frame = 1
Query:    4 ESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGGLIEQQDALPPHRLLTLVQQAVAYQIEFCRYHPRVTPRVSTLARDFQLVVVPNRQRDLFVARGGEPFATPVKCIDWVGPEGFLLVTG 777
            E        +IR D++RMIVQYLHDE +  S M V DEAN+++ E++ R++  +R+RKAV++G W     L TKTL + +HK +LYA Y+Q+YLE IE +E QKAF +LN+RLKP+E    +TP EF+ LCYLLT KSV DAP F+ W+G+ + RE+LA+    +V+ E+    E    +PP RLLT+++QAVAYQIE  RYHPR+ PRV+TL  D+  +++PN  R +F    G      VKC++++G EG  +V+G
Sbjct:  114 EGIFNAQEERIREDIIRMIVQYLHDEGYHASKMTVLDEANVKSYEREERQSDIRRMRKAVLDGDWAEVDRLCTKTLMK-NHKSFLYAAYKQQYLEYIEYREIQKAFTHLNKRLKPLEHLQ-TTPNEFKDLCYLLTGKSVHDAPSFKNWEGIGSAREKLAEHFQNMVDFEATDR-EGSVYVPPERLLTMLRQAVAYQIESSRYHPRIAPRVTTLLEDYHSLIIPNAVRSIFSGHKGN-----VKCVEFIGEEGLSIVSG 363          
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: A0A4P9W5R9_9FUNG (WD40 repeat-containing protein SMU1 (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W5R9_9FUNG)

HSP 1 Score: 228 bits (581), Expect = 8.560e-69
Identity = 121/260 (46.54%), Postives = 176/260 (67.69%), Query Frame = 1
Query:    4 ESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGGLIEQQDAL--PPHRLLTLVQQAVAYQIEFCRYHPRVTPRVSTLARDFQLVVVPNRQRDLFVARGGEPFATPVKCIDWVGPEGFLLVTG 777
            E        +I+ D+LR+IVQYL+DE +  S M + DEAN+++ E++ R  ++KR+RKAV++G W     L +K L + +HK +LYA+Y+Q+YLE IE  E QKAF +LN+RLKP+E     TP+EF+ LCYLLT KSV DA  F+ W+G+   RE+LA+    +V+++S    E+Q ++  PP RLLTL++QAVAYQIEF RYHPR+ P+V+TL  D+  +++PN     F    G      VKC+++VG EG +LV+G
Sbjct:   21 EDIFNSKEERIKEDILRLIVQYLNDEGYHVSKMTILDEANVKSHEREERHIETKRVRKAVLDGDWAEVDRLCSKPLVK-NHKSFLYAVYKQQYLEYIEHHEIQKAFTHLNKRLKPLEHLQ-KTPSEFKDLCYLLTAKSVHDAVSFKSWEGIGPSREKLAEQFQNMVDMDSA---ERQGSVYVPPQRLLTLLRQAVAYQIEFSRYHPRIAPKVTTLLEDYASLIIPNAVCHTFTGHKGN-----VKCVEFVGEEGSMLVSG 270          
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: A0A176W4M5_MARPO (WD40 repeat-containing protein SMU1 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W4M5_MARPO)

HSP 1 Score: 233 bits (595), Expect = 2.990e-68
Identity = 121/258 (46.90%), Postives = 172/258 (66.67%), Query Frame = 1
Query:    4 ESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGGLIEQQDALPPHRLLTLVQQAVAYQIEFCRYHPRVTPRVSTLARDFQLVVVPNRQRDLFVARGGEPFATPVKCIDWVGPEGFLLVTG 777
            ++  + ++ +I+ D+++MI+QYL DE +F S M +QDEAN+R  E    R+Q KR++ A+++G W     L+ KT P + H+ +LY  Y+Q+YLELIE+ EYQKAFA L +RLKP+E    S   EF+ LCYLLTCK + DAP F+ W+GV A RE+L +  + ++E+ES  L   +  +  HRLL L++QAV YQIEF RYHP+V P V TL  D+   V+PN  R  F  RG     + VKC+D+VG EG +LV+G
Sbjct:  210 DAIFDHNNHKIKEDIIKMIIQYLQDEGYFASMMTIQDEANVRVNEHLRHRSQFKRIKTAIMDGEWSEMEKLIQKT-PLKDHQHFLYNFYKQQYLELIEQMEYQKAFALLTKRLKPLEQMG-SLHNEFKDLCYLLTCKCIHDAPSFKNWEGVAASREKLVEQFSSMLEIESNDLAVARQEMQQHRLLHLLKQAVRYQIEFSRYHPKVVPIVPTLLEDYSCFVLPNAHRTTF--RGHR---SNVKCVDFVGEEGSMLVSG 460          
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: A0A397SL15_9GLOM (WD40 repeat-containing protein SMU1 n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SL15_9GLOM)

HSP 1 Score: 225 bits (573), Expect = 1.740e-66
Identity = 122/258 (47.29%), Postives = 169/258 (65.50%), Query Frame = 1
Query:    4 ESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGGLIEQQDALPPHRLLTLVQQAVAYQIEFCRYHPRVTPRVSTLARDFQLVVVPNRQRDLFVARGGEPFATPVKCIDWVGPEGFLLVTG 777
            E    P  P+IR D++RMIVQYL DE +  S M V DEAN++  E++ R  + KRL+KA+++G W     L    L + + K +LYA+Y+Q+YLE IE QE QKAF +LNRRLKP+E    +TP EF+ LCYLLT K+V DAP F+ W+G+   RE+L +    ++  E+    +    +PP+RLLTL++QAVAYQIEF RYHPRV PRV+TL +D+   V+PN  R   V   G      VKC++++G EG  +V+G
Sbjct:   44 EDIFNPEDPKIREDIIRMIVQYLSDEGYTASKMTVHDEANVKWHEREERVIEVKRLKKAILDGDWAEVEKLSANPLVK-NQKSFLYAVYKQQYLEYIEYQETQKAFTFLNRRLKPLE-LYQTTPNEFKDLCYLLTAKAVHDAPSFKSWEGIGPAREKLVEQFQNMLNFENTDK-DGSVYVPPNRLLTLLRQAVAYQIEFSRYHPRVAPRVNTLLQDYTSFVIPNAVRATLVGHHGN-----VKCVEFIGEEGREIVSG 293          
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: A0A397JPM7_9GLOM (WD40 repeat-containing protein SMU1 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JPM7_9GLOM)

HSP 1 Score: 224 bits (570), Expect = 6.300e-66
Identity = 121/261 (46.36%), Postives = 170/261 (65.13%), Query Frame = 1
Query:    4 ESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGGLIEQQDA---LPPHRLLTLVQQAVAYQIEFCRYHPRVTPRVSTLARDFQLVVVPNRQRDLFVARGGEPFATPVKCIDWVGPEGFLLVTG 777
            E    P  P+IR D++RMI+QYL DE +  S M + DEAN++  E++ R  + KRL+KA+++G W     L TK L + +HK +LYA+Y+Q+YLE IE QE QKAF +LN+RLKP+E    +TP EF+ LCYLLT K+V DAP FR W G+   R +L +    ++  E+     ++D    +PP+RLLTL++QA AYQIEF RYHPRV PRV+TL +D+   V+PN  R   +   G      VKC+++VG  G  +V+G
Sbjct:   57 EDIFNPEDPKIREDIIRMIIQYLSDEGYTASKMTIYDEANVKWHEREERVVEVKRLKKALLDGDWAEVDKLCTKPLVK-NHKSFLYAVYKQQYLEYIEHQETQKAFTFLNKRLKPLEHLQ-TTPNEFKDLCYLLTAKAVHDAPSFRNWDGIGPARVKLVEQFQNMLNFEN----TEKDGSVHVPPNRLLTLLRQAFAYQIEFSRYHPRVAPRVNTLLQDYTSFVIPNAVRATLIGHRGN-----VKCVEFVGEGGREIVSG 306          
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: A0A507DX48_9FUNG (WD40 repeat-containing protein SMU1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DX48_9FUNG)

HSP 1 Score: 221 bits (564), Expect = 6.630e-65
Identity = 116/258 (44.96%), Postives = 169/258 (65.50%), Query Frame = 1
Query:    4 ESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGGLIEQQDALPPHRLLTLVQQAVAYQIEFCRYHPRVTPRVSTLARDFQLVVVPNRQRDLFVARGGEPFATPVKCIDWVGPEGFLLVTG 777
            E     +  +I+ D++RMIVQYLHD  +  + M + DEAN+++ E++ R  + +R+RKAV++G W     L TKTL + +HK +LYA+Y+Q+YLE IE  E QKAF +LN+RLKP+E    +T  EF+ LCYLLT KS  DAP F+ W G+M  RE+LA+    +V+ E+    E    +PP RLLT+++QAVA+QIE  RYHPR+ PRV+TL  D+  +++PN  R  F    G      VKC+ ++G EG  +++G
Sbjct:   72 EEIFNANEERIKEDIVRMIVQYLHDGGYHAAKMTLLDEANVKSYEREERVFEIRRMRKAVLDGDWAEVDKLCTKTLMK-NHKSFLYAVYKQQYLEYIEHHEIQKAFTHLNKRLKPLEHLQ-TTSNEFKDLCYLLTAKSTLDAPSFKNWDGIMPAREKLAEHFQNMVDFENADR-EGSVYVPPQRLLTMLRQAVAFQIETSRYHPRIAPRVTTLLEDYHSLIIPNAVRSTFTGHKGN-----VKCVKFIGEEGLSILSG 321          
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Match: A0A1Y2H8K1_9FUNG (WD40 repeat-containing protein SMU1 n=2 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2H8K1_9FUNG)

HSP 1 Score: 223 bits (569), Expect = 9.550e-65
Identity = 121/265 (45.66%), Postives = 171/265 (64.53%), Query Frame = 1
Query:   13 LEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQARRAQSKRLRKAVIEGAWEMAVSLVTKT----------LPRQHHKRYLYALYRQEYLELIERQEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQGVMAGRERLADDLARLVELESGGLIEQQDALPPHRLLTLVQQAVAYQIEFCRYHPRVTPRVSTLARDFQLVVVPNRQRDLFVARGGEPFATPVKCIDWVGPEGFLLVTG 777
            L P+  +I+ D++R++VQYL DE +  S + +QDEAN+R  E   R+   +RLRKA+++G W     LV  +          L  +HHK +LYALY+Q++LELIE  E  KAF +L +RLKP+E+  A T  EF+ LCYLLT KSV DAP FR W+G+  GRERLA+ L  +V+LE    ++++  +PP+RL+TL++QAVAYQ+EF RYHP+V PR+ TL  D+  ++VPN  R              VKC  +VG +G  LV+G
Sbjct:  103 LNPADSKIKEDIVRLMVQYLTDEGYLASKLTLQDEANVRIHEAAERQTDLRRLRKAILDGDWAEVDKLVLSSXXXXXXXXXALLGKHHKPFLYALYKQQFLELIEHHEVHKAFTFLTKRLKPLEALQA-TADEFRDLCYLLTAKSVHDAPAFRNWEGIGPGRERLAEQLQAMVDLEG---VDREVFIPPNRLITLLRQAVAYQVEFARYHPKVPPRIQTLLEDYTTLIVPNAVRHTLSGHKDN-----VKCTSFVGADGQYLVSG 358          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13227.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YTG5_9STRA2.930e-10969.83WD40 repeat-containing protein SMU1 n=1 Tax=Tribon... [more]
A0A6H5KDG3_9PHAE4.030e-8464.08CTLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G553_ECTSI4.860e-8364.56WD40 repeat-containing protein SMU1 n=1 Tax=Ectoca... [more]
A0A0L0HFU0_SPIPD2.140e-6947.67WD40 repeat-containing protein SMU1 n=2 Tax=Spizel... [more]
A0A4P9W5R9_9FUNG8.560e-6946.54WD40 repeat-containing protein SMU1 (Fragment) n=1... [more]
A0A176W4M5_MARPO2.990e-6846.90WD40 repeat-containing protein SMU1 n=2 Tax=Marcha... [more]
A0A397SL15_9GLOM1.740e-6647.29WD40 repeat-containing protein SMU1 n=1 Tax=Glomus... [more]
A0A397JPM7_9GLOM6.300e-6646.36WD40 repeat-containing protein SMU1 n=1 Tax=Divers... [more]
A0A507DX48_9FUNG6.630e-6544.96WD40 repeat-containing protein SMU1 n=1 Tax=Powell... [more]
A0A1Y2H8K1_9FUNG9.550e-6545.66WD40 repeat-containing protein SMU1 n=2 Tax=Catena... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13227contigP-wetherbeei_contig13227:860..1776 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G553
PFAMsWD40
Model size777
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.97e-84
EggNOG OGsKOG0266@1|root,KOG0266@2759|Eukaryota
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-00_008530.1
DescriptionWD repeat-containing protein
Cds size777
COG categoryB
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185978.3262546-CDS-P-wetherbeei_contig13227:859..14501683185978.3262546-CDS-P-wetherbeei_contig13227:859..1450Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13227 860..1450 +
1683185978.3360164-CDS-P-wetherbeei_contig13227:1590..17761683185978.3360164-CDS-P-wetherbeei_contig13227:1590..1776Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13227 1591..1776 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13227.3.1prot_P-wetherbeei_contig13227.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13227 860..1776 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13227.3.1

>prot_P-wetherbeei_contig13227.3.1 ID=prot_P-wetherbeei_contig13227.3.1|Name=mRNA_P-wetherbeei_contig13227.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=259bp
PESALEPSSPQIRLDLLRMIVQYLHDERFFTSAMVVQDEANMRTTEQQAR
RAQSKRLRKAVIEGAWEMAVSLVTKTLPRQHHKRYLYALYRQEYLELIER
QEYQKAFAYLNRRLKPMESTAASTPTEFQSLCYLLTCKSVGDAPHFRGWQ
GVMAGRERLADDLARLVELESGGLIEQQDALPPHRLLTLVQQAVAYQIEF
CRYHPRVTPRVSTLARDFQLVVVPNRQRDLFVARGGEPFATPVKCIDWVG
PEGFLLVTG
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mRNA from alignment at P-wetherbeei_contig13227:860..1776+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13227.3.1 ID=mRNA_P-wetherbeei_contig13227.3.1|Name=mRNA_P-wetherbeei_contig13227.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=917bp|location=Sequence derived from alignment at P-wetherbeei_contig13227:860..1776+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGAGTCGGCGCTCGAGCCGTCGTCGCCGCAGATCCGCCTGGACTTGCT CCGCATGATCGTGCAGTACCTCCACGACGAGCGCTTCTTCACGAGCGCCA TGGTCGTCCAGGATGAGGCCAACATGCGAACGACGGAGCAGCAGGCGCGC CGCGCGCAGAGCAAGCGCCTGCGCAAAGCCGTCATCGAGGGCGCATGGGA GATGGCGGTATCGCTTGTCACAAAGACGCTGCCTCGGCAGCACCACAAGC GCTATCTCTACGCGCTCTACCGCCAGGAATACCTCGAGCTCATCGAGCGC CAGGAGTACCAGAAGGCGTTCGCCTACCTGAACCGCCGCCTCAAGCCGAT GGAGAGCACGGCGGCATCGACACCCACCGAGTTCCAATCCCTCTGCTACC TCCTTACCTGCAAGTCGGTCGGCGACGCGCCGCACTTCCGCGGCTGGCAG GGCGTCATGGCCGGGCGAGAGCGGCTGGCGGACGACCTGGCGCGCCTGGT GGAGCTGGAGAGCGGTGGCCTGATTGAGCAGCAGGATGCGCTACCACCGC ACCGCCTGCTGACGCTTGTGCAGCAGGCCGTCGCCTACCAGGTCAGTTTC AGTCAGCCAGCTCTTTCTCTTGTAAAATTTTGTAAATGTTCGAGCATTTC GTTCTCGGAACGAAGGAGATTGCGTGTGCAACGATTGTAAGCCTTTGTCC GTTGCTCCTTATTCCCTTTTCCTTTTGTCAGATCGAGTTTTGCCGGTATC ACCCACGGGTGACGCCGCGCGTCAGCACCCTGGCGCGCGACTTCCAGCTG GTGGTGGTACCCAACCGTCAGCGGGACCTCTTTGTAGCGCGTGGCGGCGA GCCGTTCGCGACCCCAGTCAAATGCATCGACTGGGTCGGGCCCGAAGGCT TCCTGCTCGTCACCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13227:860..1776+

>mRNA_P-wetherbeei_contig13227.3.1 ID=mRNA_P-wetherbeei_contig13227.3.1|Name=mRNA_P-wetherbeei_contig13227.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig13227:860..1776+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGAGTCGGCGCTCGAGCCGTCGTCGCCGCAGATCCGCCTGGACTTGCT
CCGCATGATCGTGCAGTACCTCCACGACGAGCGCTTCTTCACGAGCGCCA
TGGTCGTCCAGGATGAGGCCAACATGCGAACGACGGAGCAGCAGGCGCGC
CGCGCGCAGAGCAAGCGCCTGCGCAAAGCCGTCATCGAGGGCGCATGGGA
GATGGCGGTATCGCTTGTCACAAAGACGCTGCCTCGGCAGCACCACAAGC
GCTATCTCTACGCGCTCTACCGCCAGGAATACCTCGAGCTCATCGAGCGC
CAGGAGTACCAGAAGGCGTTCGCCTACCTGAACCGCCGCCTCAAGCCGAT
GGAGAGCACGGCGGCATCGACACCCACCGAGTTCCAATCCCTCTGCTACC
TCCTTACCTGCAAGTCGGTCGGCGACGCGCCGCACTTCCGCGGCTGGCAG
GGCGTCATGGCCGGGCGAGAGCGGCTGGCGGACGACCTGGCGCGCCTGGT
GGAGCTGGAGAGCGGTGGCCTGATTGAGCAGCAGGATGCGCTACCACCGC
ACCGCCTGCTGACGCTTGTGCAGCAGGCCGTCGCCTACCAGATCGAGTTT
TGCCGGTATCACCCACGGGTGACGCCGCGCGTCAGCACCCTGGCGCGCGA
CTTCCAGCTGGTGGTGGTACCCAACCGTCAGCGGGACCTCTTTGTAGCGC
GTGGCGGCGAGCCGTTCGCGACCCCAGTCAAATGCATCGACTGGGTCGGG
CCCGAAGGCTTCCTGCTCGTCACCGGC
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