mRNA_P-wetherbeei_contig13173.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13173.1.1
Unique NamemRNA_P-wetherbeei_contig13173.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig13173.1.1 vs. uniprot
Match: D8LM45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM45_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 3.680e-47
Identity = 98/274 (35.77%), Postives = 137/274 (50.00%), Query Frame = 1 
Query:   73 IAFPRPNGLRHGHGTRVWSTGARYDGPFVDDKMEGGGVFTDADXXXXXXXXXXXXXXGEGRCRYGNASGSDFSCVLGRRHPGKGHCEYSGAWRNDVPHGDGRLVCVDGRETAGRWIAGRLCGWGRAHLIPDTERGDPARMHIGGVGGLYRLARWAGRWNDGGEPGEGGGALXXXXXXXXXXXXXXXDGFGVAEYACGDRVVGDWRRGAPRGYGIYVFARSLRLRAVFWATTDGHRE-WAEWASAERESRLVREALRSIAARPGLLLGLDVDEVR 891
            + FP PN LR               G + +D+MEG GV   A+              G+GRC++GN   + F C LG  H G+G+C Y G W+     G G+ +CVD R   G W  G++ GW  + L+   ERGDP RM IGGVGGLYR++R++G+W++G                          G GVAEY   DR++G++      GYG+Y F  S + RA FW    G+RE W E    E   +L   AL++I A PG L+  D+ E++
Sbjct:  284 VRFPLPNSLRXXXXXXXXXXXXXXXGRWENDRMEGDGVHVCAEGSRYEGQLRANYRHGQGRCQWGNRHDTPFRCPLGYTHAGRGYCVYEGGWKLGHWEGQGKFLCVDDRTAEGTWKKGKMDGWATSELMLAHERGDPRRMFIGGVGGLYRVSRYSGQWSEG-----------------------VRQGLGVAEYTNKDRLIGNFVGTQLDGYGVYSFGASGKARAAFWRM--GNRERWVEDKEVEANGQLAATALKTIRATPGALVSGDLGELK 532
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BLAST of mRNA_P-wetherbeei_contig13173.1.1 vs. uniprot
Match: A0A7S3H286_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H286_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.150e-22
Identity = 69/214 (32.24%), Postives = 94/214 (43.93%), Query Frame = 1 
Query:   82 PRPNGLRHGHGTRVWSTGARYDGPFVDDKMEGGGVFTDADXXXXXXXXXXXXXXGEGRCRYGNASGSDFSCVLGRRHPGKGHCEYSGAWRNDVPHGDGRLVCVDGRETAGRWIAGRLCGWGRAHLIPDTERGDPARMHIGGVGGLYRLARWAGRWNDGGEPGEGGGALXXXXXXXXXXXXXXXDGFGVAEYACGDRVVGDWRRGAPRGYGIYVF 723
            P+ +G RHG G R W++GARY+G +V+DKM          XXXXXX        G+G  ++GN  G    C LG +H G G+C Y+G++R     G G   C+ G    G             H + D E+GD  R  IGG+G LYR   ++G W                             G+G   Y  GD + G +  G P G  +Y F
Sbjct:  298 PKCDGWRHGFGVRTWTSGARYEGQWVEDKMHXXXXXXXXXXXXXXXTFRNGLRSGKGTEQFGNLLGIPNCCPLGYKHHGTGYCTYTGSYRAGQFWGTGEFKCLLGPVYKGXXXXXXXXXXXEMHFLKDGEKGDLKRQCIGGMGSLYRAESYSGAW-----------------------CHNKRIGYGCLTYINGDTIQGHFEHGQPHGVHVYTF 488
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BLAST of mRNA_P-wetherbeei_contig13173.1.1 vs. uniprot
Match: A0A812I6S1_9DINO (Rsph10b protein n=5 Tax=Sar TaxID=2698737 RepID=A0A812I6S1_9DINO)

HSP 1 Score: 88.2 bits (217), Expect = 7.360e-16
Identity = 47/114 (41.23%), Postives = 57/114 (50.00%), Query Frame = 1 
Query:   70 GIAFPRPNGLRHGHGTRVWSTGARYDGPFVDDKMEGGGVFTDADXXXXXXXXXXXXXX--GEGRCRYGNASGSDFSCVLGRRHPGK-GHCEYSGAWRNDVPHGDGRLVCVDGRE 402
            G+  P  +G RHG G RVWS+GARY+G +V D M G G+   A                   G C +G++ G  F C L R H G  G C Y G WR    HG+GR VC DGR 
Sbjct:  380 GVLVPAADGKRHGRGVRVWSSGARYEGDWVQDAMSGFGILIGAGPAGLRYEGQFQDGRFXXRGVCSWGHSGGGRFVCPLQRSHLGSVGRCIYDGMWRRGELHGEGRFVCCDGRS 493
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13173.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM45_ECTSI3.680e-4735.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3H286_9STRA2.150e-2232.24Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A812I6S1_9DINO7.360e-1641.23Rsph10b protein n=5 Tax=Sar TaxID=2698737 RepID=A0... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13173contigP-wetherbeei_contig13173:444..1480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LM45
PFAMsFYVE,MORN
Model size891
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.04e-48
EggNOG OGsCOG5253@1|root,KOG0229@2759|Eukaryota
Description1-phosphatidylinositol-4-phosphate 5-kinase activity
Cds size891
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185976.1959207-CDS-P-wetherbeei_contig13173:443..11941683185976.1959207-CDS-P-wetherbeei_contig13173:443..1194Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13173 444..1194 -
1683185976.2039132-CDS-P-wetherbeei_contig13173:1340..14801683185976.2039132-CDS-P-wetherbeei_contig13173:1340..1480Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13173 1341..1480 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13173.1.1prot_P-wetherbeei_contig13173.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13173 444..1480 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13173.1.1

>prot_P-wetherbeei_contig13173.1.1 ID=prot_P-wetherbeei_contig13173.1.1|Name=mRNA_P-wetherbeei_contig13173.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=297bp
GKYVWQDGGYYEGEYLAVTMSKTGIAFPRPNGLRHGHGTRVWSTGARYDG
PFVDDKMEGGGVFTDADGARYEGAFIAGRRRGEGRCRYGNASGSDFSCVL
GRRHPGKGHCEYSGAWRNDVPHGDGRLVCVDGRETAGRWIAGRLCGWGRA
HLIPDTERGDPARMHIGGVGGLYRLARWAGRWNDGGEPGEGGGALGGGSA
GGGGGGGSGRDGFGVAEYACGDRVVGDWRRGAPRGYGIYVFARSLRLRAV
FWATTDGHREWAEWASAERESRLVREALRSIAARPGLLLGLDVDEVR
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mRNA from alignment at P-wetherbeei_contig13173:444..1480-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13173.1.1 ID=mRNA_P-wetherbeei_contig13173.1.1|Name=mRNA_P-wetherbeei_contig13173.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1037bp|location=Sequence derived from alignment at P-wetherbeei_contig13173:444..1480- (Phaeothamnion wetherbeei SAG_119_79)
GGAAAGTATGTCTGGCAGGACGGGGGCTACTACGAGGGCGAGTACCTCGC
CGTGACGATGAGCAAGACCGGCATCGCTTTCCCTCGCCCTAACGGGCTGC
GACACGGCCACGGGACCCGCGTGTGGTCCACTGGAGCAAGGTGTGTTTTC
CAAGTTTTCCCGCCTGTTGACTAAGAGCAGTTTGTCATGTGTTCCCCGCT
GTGTACCAACCCATTCCTCTTCTGTAGACTGGCCAAGCATTCGTCGTCTT
TATTATTTTTTGCTCACTTCCGTTGAGGAAAAAAAGGTACGACGGCCCAT
TTGTGGACGACAAGATGGAGGGCGGCGGCGTTTTTACGGACGCCGACGGC
GCCCGCTATGAGGGCGCTTTTATCGCCGGCCGCCGCCGCGGCGAGGGCCG
TTGCCGCTATGGCAACGCCAGCGGCAGCGACTTCAGCTGCGTTTTGGGCC
GCAGGCACCCTGGCAAAGGCCACTGCGAATACAGCGGCGCCTGGCGGAAC
GACGTGCCGCACGGCGACGGCCGGTTGGTCTGCGTCGACGGCAGGGAAAC
CGCTGGGCGGTGGATTGCCGGGCGCCTCTGCGGCTGGGGTCGCGCGCATT
TGATCCCCGACACAGAGCGCGGCGATCCGGCCCGGATGCATATCGGTGGC
GTCGGTGGCCTCTATCGGCTGGCGCGGTGGGCGGGCCGCTGGAATGACGG
GGGAGAACCCGGGGAAGGCGGCGGCGCTCTCGGCGGCGGCAGTGCTGGTG
GCGGCGGCGGCGGTGGCAGCGGCCGCGATGGCTTCGGCGTCGCCGAGTAC
GCCTGCGGCGACCGCGTCGTCGGCGACTGGCGGCGCGGCGCGCCGCGCGG
CTACGGCATCTACGTCTTCGCGCGCAGCCTGCGTCTGCGGGCGGTCTTCT
GGGCCACCACCGACGGCCACCGCGAGTGGGCCGAGTGGGCTAGCGCCGAG
CGCGAGAGCCGGCTGGTGCGGGAGGCGCTGCGGAGCATCGCCGCCCGGCC
GGGCCTACTGCTGGGACTCGACGTGGACGAGGTGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13173:444..1480-

>mRNA_P-wetherbeei_contig13173.1.1 ID=mRNA_P-wetherbeei_contig13173.1.1|Name=mRNA_P-wetherbeei_contig13173.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig13173:444..1480- (Phaeothamnion wetherbeei SAG_119_79)
GGAAAGTATGTCTGGCAGGACGGGGGCTACTACGAGGGCGAGTACCTCGC
CGTGACGATGAGCAAGACCGGCATCGCTTTCCCTCGCCCTAACGGGCTGC
GACACGGCCACGGGACCCGCGTGTGGTCCACTGGAGCAAGGTACGACGGC
CCATTTGTGGACGACAAGATGGAGGGCGGCGGCGTTTTTACGGACGCCGA
CGGCGCCCGCTATGAGGGCGCTTTTATCGCCGGCCGCCGCCGCGGCGAGG
GCCGTTGCCGCTATGGCAACGCCAGCGGCAGCGACTTCAGCTGCGTTTTG
GGCCGCAGGCACCCTGGCAAAGGCCACTGCGAATACAGCGGCGCCTGGCG
GAACGACGTGCCGCACGGCGACGGCCGGTTGGTCTGCGTCGACGGCAGGG
AAACCGCTGGGCGGTGGATTGCCGGGCGCCTCTGCGGCTGGGGTCGCGCG
CATTTGATCCCCGACACAGAGCGCGGCGATCCGGCCCGGATGCATATCGG
TGGCGTCGGTGGCCTCTATCGGCTGGCGCGGTGGGCGGGCCGCTGGAATG
ACGGGGGAGAACCCGGGGAAGGCGGCGGCGCTCTCGGCGGCGGCAGTGCT
GGTGGCGGCGGCGGCGGTGGCAGCGGCCGCGATGGCTTCGGCGTCGCCGA
GTACGCCTGCGGCGACCGCGTCGTCGGCGACTGGCGGCGCGGCGCGCCGC
GCGGCTACGGCATCTACGTCTTCGCGCGCAGCCTGCGTCTGCGGGCGGTC
TTCTGGGCCACCACCGACGGCCACCGCGAGTGGGCCGAGTGGGCTAGCGC
CGAGCGCGAGAGCCGGCTGGTGCGGGAGGCGCTGCGGAGCATCGCCGCCC
GGCCGGGCCTACTGCTGGGACTCGACGTGGACGAGGTGCGG
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