mRNA_P-wetherbeei_contig13134.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: A0A2D4C2E2_PYTIN (SCD domain-containing protein (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2E2_PYTIN) HSP 1 Score: 112 bits (279), Expect = 2.440e-25 Identity = 50/110 (45.45%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 130 IAAIFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLL 459 I +FNGV VHRYRD +R+E IR LG W++ALPD F+ + Y+KY+GW+L+DK A+VRL V++ L+ +Y+ ++ +++E FT RF P + + DVD + +A ++LL Sbjct: 345 IQLLFNGVVVHRYRDVMADIRLESIRTLGNWIMALPDQFLKDNYMKYLGWVLNDKDASVRLGVVEILRELYENEEFAVKLELFTSRFLPRYLELCNDVDESVVQACIKLL 454
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: A0A4W4HJ05_ELEEL (Stromal antigen 3 n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4HJ05_ELEEL) HSP 1 Score: 102 bits (254), Expect = 1.560e-24 Identity = 47/107 (43.93%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 139 IFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLL 459 IF GV+VHRYRD +RV C++ +G W+ P +F+ +G+LKYMGW+L+DK A+VRL+ + +LQ +Y ++ + R+E FT RF+ ++ MV D D + A++LL Sbjct: 4 IFKGVFVHRYRDRVPEIRVICMKEMGVWLRENPTSFLNDGHLKYMGWMLNDKQASVRLQCVLALQKLYAERSFISRLELFTSRFKERMLNMVMDKDPDVAVEAVKLL 110
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: A0A5N5MG58_PANHP (SCD domain-containing protein n=3 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5MG58_PANHP) HSP 1 Score: 105 bits (262), Expect = 4.570e-23 Identity = 52/121 (42.98%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 139 IFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLL---RRAWEGGLLDD 492 IF GV+VHRYRD +R C+ LG W+ P +F+ +G+LKY+GW+L DK A+VRLR + SLQ +Y+++ + R+E FT RF+ ++ MV D D + A+RLL ++ E GL ++ Sbjct: 303 IFKGVFVHRYRDKVSEIRAVCMEELGVWLRENPASFLNDGHLKYLGWMLHDKQASVRLRCVLSLQKLYEEKSFIGRLELFTSRFKERLLNMVLDKDPDVAVEAVRLLLIIKQKTEDGLSEE 423
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: A0A8C6YYH8_NOTPE (Cohesin subunit SA-2-like n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6YYH8_NOTPE) HSP 1 Score: 105 bits (261), Expect = 5.920e-23 Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 82 LQQRRHAEAASTLEEGIAAIFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLL 459 LQ+RR + ++ + AIF G +++RYRD +R CI +G WM PD F+ + YLKY+GW+L DK A VRL+ L LQ IY +++++ R++ FT RF+ +V M D D + A++LL Sbjct: 44 LQRRRKEQKLLDIQNMMNAIFKGTFLNRYRDVIPEIRATCIEEIGSWMNTYPDAFLNDSYLKYVGWMLYDKQAEVRLKCLLGLQGIYSRKELVSRMDLFTSRFKDRIVSMPLDKDHEVAVQAMKLL 169
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: A0A8C6YTE9_NOTPE (Cohesin subunit SA-2-like n=3 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6YTE9_NOTPE) HSP 1 Score: 105 bits (261), Expect = 6.180e-23 Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 82 LQQRRHAEAASTLEEGIAAIFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLL 459 LQ+RR + ++ + AIF G +++RYRD +R CI +G WM PD F+ + YLKY+GW+L DK A VRL+ L LQ IY +++++ R++ FT RF+ +V M D D + A++LL Sbjct: 233 LQRRRKEQKLLDIQNMMNAIFKGTFLNRYRDVIPEIRATCIEEIGSWMNTYPDAFLNDSYLKYVGWMLYDKQAEVRLKCLLGLQGIYSRKELVSRMDLFTSRFKDRIVSMPLDKDHEVAVQAMKLL 358
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: A0A7L2SB96_9PASS (STAG2 protein (Fragment) n=1 Tax=Mystacornis crossleyi TaxID=98133 RepID=A0A7L2SB96_9PASS) HSP 1 Score: 98.6 bits (244), Expect = 6.920e-23 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 1 Query: 136 AIFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLL 459 AIF G +++RYRD +R CI +G W+ PD F+ + YLKY+GW+L DK A VRL+ L LQ IY ++++ R++ FT RF+ +V M D D + A++LL Sbjct: 15 AIFKGTFLNRYRDVIPEIRATCIEEIGSWIKTYPDAFLNDSYLKYVGWMLFDKQAEVRLKCLLGLQGIYSRKELASRMDLFTNRFKDRIVSMPLDKDHEVAVQAMKLL 122
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: A0A7S0RG96_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RG96_9CHLO) HSP 1 Score: 104 bits (259), Expect = 1.130e-22 Identity = 53/126 (42.06%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 112 STLEEGIAAIFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLLRRAWEGGLLD 489 ++LE + +FNGV+VHRYRD E VR ECI A+G W P F+ + YLKY+GW L+DK ++VR L +LQ++YD++D ++ FT RF V +MV D+D + +L L + L+D Sbjct: 213 NSLEALMKQVFNGVFVHRYRDIDEHVRGECIAAVGRWCHTYPSYFLKDTYLKYIGWSLNDKESSVRSAALTALQVLYDEEDNYAPMDTFTARFSERVCQMVDDIDNNVAIKSLGTLTKLVRHDLID 338
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: UPI00074FF70D (cohesin subunit SA-2-like n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FF70D) HSP 1 Score: 104 bits (259), Expect = 1.150e-22 Identity = 48/114 (42.11%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 118 LEEGIAAIFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLL 459 +E + AIF G+++ RYRD +R CI +G WM P+TF+ + YLKY+GW+L DK VRL+ LQ LQ IYDQ++++ +++ FT RF+ ++ M D D + A++LL Sbjct: 301 IENMMNAIFKGIFLQRYRDIIPEIRAICIEEMGSWMKIYPNTFLNDSYLKYIGWMLYDKQPEVRLKCLQGLQGIYDQKELVSKMDLFTSRFKDRIMSMTLDKDHEVAVQAMKLL 414
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: A0A6J2ULP4_CHACN (cohesin subunit SA-1-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2ULP4_CHACN) HSP 1 Score: 103 bits (258), Expect = 1.580e-22 Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 130 IAAIFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLLRRAWEGGLLDDLKEEE 507 I ++F GV+VHRYRD +R C+ +G W+ P F+ +G+LKY+GW+L DK A VRL+ + +LQ +Y ++D + R+E FT RFR +V MV D D + A++LL E D L EEE Sbjct: 296 INSVFKGVFVHRYRDNVPEIRTICMEEIGLWLREYPTYFLSDGHLKYLGWMLHDKQAPVRLQCVLALQRLYQEKDFIGRLELFTSRFRERMVNMVLDKDFDVAVEAIKLLLLVQER-TEDGLSEEE 420
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Match: UPI0011B82D69 (cohesin subunit SA-3 isoform X1 n=3 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B82D69) HSP 1 Score: 103 bits (258), Expect = 1.580e-22 Identity = 54/134 (40.30%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 130 IAAIFNGVWVHRYRDPCEPVRVECIRALGEWMLALPDTFVVNGYLKYMGWLLSDKGAAVRLRVLQSLQLIYDQQDMLMRIEEFTGRFRPAVVRMVFDVDGAASEAALRLLRRAWEGGLLDDLKEEEREEVRVWH 531 I A GV+VHRYRD +R CI+ LG W+ P++F+ +GYLKY+GW L DK + VRL+ +++LQ +Y ++D L R+E FT RF+ ++ MVFD + + A+ LL L+ EE +E H Sbjct: 297 INAAMRGVFVHRYRDCVPDIRAVCIQELGLWLRTDPESFLKDGYLKYLGWTLFDKQSVVRLQCVRALQALYQERDFLGRLEFFTNRFKERMLTMVFDKEPDVAAEAVNLLL------LIQQFSEEGLQEEECAH 424 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13134.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13134.1.1 >prot_P-wetherbeei_contig13134.1.1 ID=prot_P-wetherbeei_contig13134.1.1|Name=mRNA_P-wetherbeei_contig13134.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp KLATTEQQLKASLSRGSAAAAKSQALALQQRRHAEAASTLEEGIAAIFNGback to top mRNA from alignment at P-wetherbeei_contig13134:389..1572- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13134.1.1 ID=mRNA_P-wetherbeei_contig13134.1.1|Name=mRNA_P-wetherbeei_contig13134.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1184bp|location=Sequence derived from alignment at P-wetherbeei_contig13134:389..1572- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13134:389..1572- >mRNA_P-wetherbeei_contig13134.1.1 ID=mRNA_P-wetherbeei_contig13134.1.1|Name=mRNA_P-wetherbeei_contig13134.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig13134:389..1572- (Phaeothamnion wetherbeei SAG_119_79)back to top |