mRNA_P-wetherbeei_contig13088.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: A0A6H5JP10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP10_9PHAE) HSP 1 Score: 156 bits (395), Expect = 8.410e-42 Identity = 86/144 (59.72%), Postives = 101/144 (70.14%), Query Frame = 1 Query: 1 ATNLMIRDARMQMLVAPEKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVADTVVAMDCYKPADVTAAAHRIARE--CRPLGPPPAPSHTEFYLAGSGGPAARRPQTASFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 ATN MIRD RMQMLVA EKEPITPFI++V+ LY + VS+ILV+GG GDYFEVADTV+ MDCY P DVTA A RIA + H F+ AG AR PQ ++ + GKV+AR KDK+QYG+VDIDL VEQLVE Sbjct: 516 ATNFMIRDVRMQMLVAKEKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGXXXXXXVKRHKTFHFAGG----ARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVE 655
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: W7TBB4_9STRA (ABC transporter, ATPase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBB4_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.330e-40 Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = 1 Query: 1 ATNLMIRDARMQMLVAPEKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVADTVVAMDCYKPADVTAAAHRIARECRPLGPPPAPSHTEFYLAGSGGPAARRPQTASFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 ATN MIRD RMQ+LV+ +KEPITPF+AKV+ LY + +S++LV+GGAGDYFEVADTV+ MD Y P D T AA IA + + + T F+ G + R P AS T+GKV+ARGKDKLQYGE D+DLS VEQLVE Sbjct: 125 ATNFMIRDLRMQLLVSKDKEPITPFLAKVQALYTQHGISSLLVIGGAGDYFEVADTVIMMDNYTPLDKTVAAKAIADQYS------SSAGTSFFAPHFGTLSRRLPVPASLRTEGKVVARGKDKLQYGEEDVDLSGVEQLVE 260
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: W7T242_9STRA (ABC transporter, ATPase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T242_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.840e-40 Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = 1 Query: 1 ATNLMIRDARMQMLVAPEKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVADTVVAMDCYKPADVTAAAHRIARECRPLGPPPAPSHTEFYLAGSGGPAARRPQTASFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 ATN MIRD RMQ+LV+ +KEPITPF+AKV+ LY + +S++LV+GGAGDYFEVADTV+ MD Y P D T AA IA + + + T F+ G + R P AS T+GKV+ARGKDKLQYGE D+DLS VEQLVE Sbjct: 142 ATNFMIRDLRMQLLVSKDKEPITPFLAKVQALYTQHGISSLLVIGGAGDYFEVADTVIMMDNYTPLDKTVAAKAIADQYS------SSAGTSFFAPHFGTLSRRLPVPASLRTEGKVVARGKDKLQYGEEDVDLSGVEQLVE 277
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: A0A484EHU5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHU5_BRELC) HSP 1 Score: 144 bits (363), Expect = 1.380e-37 Identity = 79/142 (55.63%), Postives = 98/142 (69.01%), Query Frame = 1 Query: 1 ATNLMIRDARMQMLVAPEKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVADTVVAMDCYKPADVTAAAHRIARECRPLGPPPAPSHTEFYLAGSGGPAARRPQTASFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 ATN MIRD +MQ LVA +KEPITPFI+KV+ LY + VS++LV+GGAGDYF VAD V+ MD Y+P DVT A RIA E R + +A G +R P F +GKV++RG DK+QYGEVD+DLSAVEQ+VE Sbjct: 420 ATNFMIRDGKMQQLVAKDKEPITPFISKVQALYRQHNVSSVLVIGGAGDYFSVADHVIMMDSYEPRDVTVEAKRIASEHREVS----------QIADFGNLQSRIPSRHGFEINGKVVSRGLDKIQYGEVDLDLSAVEQIVE 551
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: D7FUV6_ECTSI (Predicted ATPase of the ABC class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV6_ECTSI) HSP 1 Score: 137 bits (344), Expect = 2.740e-37 Identity = 74/125 (59.20%), Postives = 89/125 (71.20%), Query Frame = 1 Query: 52 EKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVADTVVAMDCYKPADVTAAAHRIARECRPLGPPPAPSHTEFYLAGSGGPAARRPQTASFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 EKEPITPFI++V+ LY + VS+ILV+GG GDYFEVADTV+ MDCY P DVTA A RIA + G H F+LAG AR PQ ++ + GKV+AR KDK+QYG+VDIDL VEQLVE Sbjct: 68 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGG----ARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVE 188
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: A0A3R7IFS1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IFS1_9STRA) HSP 1 Score: 142 bits (358), Expect = 6.850e-37 Identity = 80/143 (55.94%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 1 ATNLMIRDARMQMLVAPEKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVADTVVAMDCYKPADVTAAAHRIARECRPLGPPPAPSHTEFYL-AGSGGPAARRPQTASFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 ATN MIRD +MQ LVA +KEPITPFI+KV+ LY + VS++LV+GGAGDYF VAD V+ MD Y+P DVTA A +IA E H E A GG R P + F +GK+++RG DK+QYGEVD+DLSAVEQ+VE Sbjct: 418 ATNFMIRDWKMQQLVAKDKEPITPFISKVRALYEQCGVSSVLVIGGAGDYFSVADHVIMMDSYEPRDVTAEAKKIASE-----------HGEIRQDATFGGFKVRIPLSRGFEVNGKIVSRGVDKIQYGEVDLDLSAVEQIVE 549
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: A0A7S2RPE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPE7_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.630e-36 Identity = 77/146 (52.74%), Postives = 95/146 (65.07%), Query Frame = 1 Query: 1 ATNLMIRDARMQMLVAPEKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVADTVVAMDCYKPADVTAAAHRIARECRPLGPPPAPSHTEFYLAGSGGPAARRPQTA----SFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 ATN MIRD RMQ LVA EKEPITPFI +V+ LY VS+ILV+GGAGDYF+V DTV+ MD Y P+D TA A IA++ +P+ E S P +PQ SF+ GK+ +RG K QYG++D+DLS VEQLVE Sbjct: 4 ATNFMIRDIRMQALVAKEKEPITPFITRVRTLYESHGVSSILVIGGAGDYFDVCDTVIMMDSYLPSDRTADAKAIAQQFASSSSSQSPAAVEGGAVSS--PFHYQPQRVPVAQSFSCTGKIASRGLGKFQYGDLDVDLSGVEQLVE 147
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: H3G7G9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7G9_PHYRM) HSP 1 Score: 139 bits (350), Expect = 3.730e-36 Identity = 79/143 (55.24%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 1 ATNLMIRDARMQMLVAPEKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVADTVVAMDCYKPADVTAAAHRIARECRPLGPPPAPSHTEFYLAGSGGP-AARRPQTASFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 ATN MIRD +MQ LVA +KEPITPFI+KV+ LY + VS++LV+GGAGDYF VAD V+ MD Y+P DVTA A +IA E H E + G AR P + F +GKV++RG K+QYGEVD+DLSAVEQ+VE Sbjct: 366 ATNFMIRDWKMQQLVAKDKEPITPFISKVRALYTQRGVSSVLVIGGAGDYFSVADNVIMMDSYEPRDVTAEAKKIASE-----------HGEIRQDATFGEFKARIPLSRGFEVNGKVVSRGIGKIQYGEVDLDLSAVEQIVE 497
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: A0A835YTL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTL6_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.410e-35 Identity = 90/184 (48.91%), Postives = 103/184 (55.98%), Query Frame = 1 Query: 1 ATNLMIRDARMQMLVAPEKEPITPFIAK----------------------VKPLYARLRVSTILVVGGAGDYFE--------------------VADTVVAMDCYKPADVTAAAHRIARECRPLGPPPAPSHTEFYLAGSGGPAARRPQTASFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 ATN MIRDARMQ LVAP+KEPITPFI+K V+ LYA VS++LV+GGAGDYFE VADTVV MDCY P DVTA A I E LG + L G + R P ASFTT GKV+ARGKDK+QYG+VDI+L+ VEQL E Sbjct: 455 ATNFMIRDARMQALVAPDKEPITPFISKASARAHGRARCGLLRPGQRARPVRALYADKGVSSVLVIGGAGDYFEGKLFLVSHAFPKSVGVTFYQVADTVVMMDCYAPRDVTAQARAIVTESLSLG-----HKSVIQLPEFGQVSQRTPSAASFTTHGKVVARGKDKIQYGDVDIELAPVEQLCE 633
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Match: K3WBG0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBG0_GLOUD) HSP 1 Score: 137 bits (345), Expect = 4.880e-35 Identity = 79/143 (55.24%), Postives = 97/143 (67.83%), Query Frame = 1 Query: 1 ATNLMIRDARMQMLVAPEKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVADTVVAMDCYKPADVTAAAHRIARECRPLGPPPAPSHTEFYLAGS-GGPAARRPQTASFTTDGKVMARGKDKLQYGEVDIDLSAVEQLVE 426 ATN MIRD +MQ LVA EKEPITPFI+KV+ LY + VS++LV+GGAGDYF VAD V+ MD Y+P DVT A +IA++ H E GG AR P F +GKV+ARG ++QYGEVD+DL+AVEQLVE Sbjct: 432 ATNFMIRDWKMQQLVAKEKEPITPFISKVRALYNQNGVSSVLVIGGAGDYFSVADHVIMMDSYEPRDVTKEAKQIAKQ-----------HGEIRQDDDFGGFTARIPLPRGFEVNGKVVARGLGRIQYGEVDLDLAAVEQLVE 563 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13088.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13088.1.1 >prot_P-wetherbeei_contig13088.1.1 ID=prot_P-wetherbeei_contig13088.1.1|Name=mRNA_P-wetherbeei_contig13088.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp MIRDARMQMLVAPEKEPITPFIAKVKPLYARLRVSTILVVGGAGDYFEVAback to top mRNA from alignment at P-wetherbeei_contig13088:782..1830- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13088.1.1 ID=mRNA_P-wetherbeei_contig13088.1.1|Name=mRNA_P-wetherbeei_contig13088.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1049bp|location=Sequence derived from alignment at P-wetherbeei_contig13088:782..1830- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13088:782..1830- >mRNA_P-wetherbeei_contig13088.1.1 ID=mRNA_P-wetherbeei_contig13088.1.1|Name=mRNA_P-wetherbeei_contig13088.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig13088:782..1830- (Phaeothamnion wetherbeei SAG_119_79)back to top |