mRNA_P-wetherbeei_contig13070.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: A0A836CB83_9STRA (GlcNAc-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB83_9STRA) HSP 1 Score: 210 bits (534), Expect = 7.650e-63 Identity = 100/170 (58.82%), Postives = 122/170 (71.76%), Query Frame = 1 Query: 1 QVRNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHLNAPHAQGWRASRQRDEAAELAASNARLWTLLGMPNGATDPAVVEDVRYGTWGLGRKRSLEQLYEYVGVDLSRKTYYGHQADRCGTVDFVP 510 QVRNE AKALRLMT PKLTTTW AG SF KCH RAV YDP+LPQ+FDGEEFS FARL+T GYDVYTP+++Y+ HDYN N P+A GW + RD AAE S+ RLWTLL MP G + P + V++G +GLG R+L+QL ++ +DL KT+ AD C V +VP Sbjct: 204 QVRNEGAKALRLMTQPKLTTTWAAGLSFSKCHSMRAVPYDPYLPQVFDGEEFSYFARLFTNGYDVYTPTKTYIGHDYNGANNPNAHGWYVATGRDRAAEEKMSDMRLWTLLEMPGGDSTPEGRQAVQFGPFGLGTARTLDQLMDFAMIDLRTKTHKADPADMCQDVHYVP 373
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: A0A6H5L6U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U7_9PHAE) HSP 1 Score: 179 bits (455), Expect = 2.690e-50 Identity = 89/177 (50.28%), Postives = 118/177 (66.67%), Query Frame = 1 Query: 1 QVRNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHLNAPHAQGWRASRQRD-----EAAELAASNARLWTLLGMPNGATDPAVVEDVRYGTWGLGRKRSLEQLYEYVGVDLSRKTYYGHQADRCGT-VDFVPF 513 Q RN+QA+A+ MT PKLTTTWGAG+SF KCH ER V YDP L +IFDGEEFSK ARLWT GYDVYTP R ++ HDY+H + WR++++ D + LA N RLW L+ MP + + +V+ WGLG +R+L++ E+ GVDL K + G DRCG+ V++VP+ Sbjct: 242 QPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHEQTTSWRSNKKVDGDDGKDRQRLA--NQRLWNLMEMPLSSEEGR--REVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPY 414
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: F0Y7S9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7S9_AURAN) HSP 1 Score: 168 bits (425), Expect = 3.370e-46 Identity = 87/177 (49.15%), Postives = 110/177 (62.15%), Query Frame = 1 Query: 4 VRNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHLNAPHAQ-------GWRASRQRDEAAELAASNARLWTLLGMPNGATDPAVVEDVRYGTWGLGRKRSLEQLYEYVGVDLSRKTYYGHQADRCGTVDFVPF 513 VRN QAKA RL+ PKLTT W AG SF +CH ERAV YDP P IF GEEFS+ AR +T GYD+YTP R+ V HDY H + G R ++ + A+ A+N R+WTLLGMP G DPA R G +GLG KRSL+ L + G++L +T +RCG +D+VP+ Sbjct: 233 VRNMQAKAARLLEKPKLTTLWAAGLSFSRCHAERAVPYDPHTPYIFWGEEFSRTARFFTNGYDIYTPPRTIVAHDYKHTQGDPSHFKWNGKGGPRLNQNKTIVAQRDAANRRIWTLLGMPGGDPDPAARR--RLGAYGLGDKRSLDDLVAFTGINLYNRTI---GPNRCGNIDWVPW 404
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: A0A8J2SM54_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM54_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.680e-46 Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1 Query: 4 VRNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHLNAPHAQ-------GWRASRQRDEAAELAASNARLWTLLGMPNGATDPAVVEDVRYGTWGLGRKRSLEQLYEYVGVDLSRKTYYGHQADRCGTVDFVPFE 516 VRN QAKA RL+ PKLTT W AG SF +CH ER V YDP+ P IF GEEFS+ AR +T GYD+YTP ++ + HDY H G R +R + A+N R+WTLLGMP G DP++V + G +GLG KRSL+ L + G++L +T G RCG +D+VP++ Sbjct: 243 VRNMQAKAARLLKKPKLTTLWAAGLSFSRCHAERTVPYDPYTPYIFWGEEFSRTARFFTHGYDIYTPPKTLIAHDYKHTQGDPTHFKWNGRGGPRLNRNQTIIKARDAANKRIWTLLGMPGG--DPSMVSSL--GKYGLGTKRSLDDLIAFTGINLRNRTVSGSGNSRCGNIDWVPWD 416
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: I2CPM0_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPM0_NANGC) HSP 1 Score: 160 bits (405), Expect = 9.970e-46 Identity = 88/172 (51.16%), Postives = 108/172 (62.79%), Query Frame = 1 Query: 4 VRNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHLNAPHAQGWRASRQRDEAAELAASNARLWTLLGMPNGATDPAVVEDVRY-GTWGLGRKRSLEQLYEYVGVDLSRKTYYGHQADRCGTVDFVPFE 516 VRNEQAK++ ++T PK+T+TW AGF+F KCH ++ YDP LP +FDGEEFSKFARLWTRGYDVYTP RS V+HDYNH + A AS RD EL S RL LLG E + W LG +RSLEQL ++ GVD + H + CG + +VPFE Sbjct: 54 VRNEQAKSVMMLTRPKMTSTWAAGFAFNKCHADKRTPYDPHLPSLFDGEEFSKFARLWTRGYDVYTPHRSVVYHDYNHGPSTVAA---ASWTRD-GKELERSRNRLKVLLGDSTAPLARNTSEAHAFLARWDLGNRRSLEQLIQFTGVDTVNREIL-HSS--CGYLAWVPFE 218
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: A0A7S3UP91_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UP91_HETAK) HSP 1 Score: 157 bits (398), Expect = 1.030e-45 Identity = 82/170 (48.24%), Postives = 104/170 (61.18%), Query Frame = 1 Query: 7 RNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHLNAPHAQGWRASRQRDEAAELAASNARLWTLLGMPNGATDPAVVEDVRYGTWGLGRKRSLEQLYEYVGVDLSRKTYYGHQADRCGTVDFVPFE 516 RN A + ++ PKL + W AGFSF +CHGER V YDP LP IFDGEEFS+ ARLWTRGYD YTP R V HDYN + QGWR + Q+++ + A S R++ LL MP G + G +GLG +RSL Q +VGV L R+ + CGT+ +VPFE Sbjct: 7 RNGDAFSAFHLSRPKLGSLWAAGFSFMRCHGERQVPYDPQLPNIFDGEEFSRSARLWTRGYDFYTPHRPVVVHDYNKPKDYNPQGWRNNNQQNKEKDKARSRQRIFDLLEMPEGTS----AGKAALGKYGLGDRRSLAQYEAFVGVSLKRREML---ENHCGTLQWVPFE 169
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: A0A7S1Z148_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z148_TRICV) HSP 1 Score: 157 bits (397), Expect = 7.560e-43 Identity = 83/172 (48.26%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 4 VRNEQAKALRLMTAPKLTTT-WGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHL-NAPHAQGWRASRQRDEAAELAASNARLWTLLGMPNGATDPAVVEDVRYGTWGLGRKRSLEQLYEYVGVDLSRKTYYGHQADRCGTVDFVPF 513 VR K + ++ PKLT WGAG SF KCH E V DP P +FDGEEF++ AR WT GYD+YTP+R YV HDY + P W R D A AAS+ RL T+L MP G TDPAV + +R +GLG +R+LEQL E+ GVDL + + +RCG + +VPF Sbjct: 203 VRTHATKCAQNLSKPKLTNAIWGAGLSFSKCHAELKVPVDPHTPYVFDGEEFNRAARFWTYGYDIYTPNRVYVLHDYQRSQHNPVTASWH--RNTDMVA-TAASHKRLKTMLDMPRGETDPAVADRLRRSKFGLGDRRNLEQLMEFSGVDLRNEKFPIDGKNRCGNLQWVPF 371
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: A0A7S3UUL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUL0_HETAK) HSP 1 Score: 155 bits (391), Expect = 1.350e-42 Identity = 85/172 (49.42%), Postives = 110/172 (63.95%), Query Frame = 1 Query: 7 RNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHLNAP-HAQGWRASRQRDEAAELAASNARLWTLLGMPNGATDPAVVEDVRYGTWGLGRKRSLEQLYEYVGVDL-SRKTYYGHQADRCGTVDFVPFE 516 RNEQAKA R ++ PKLTT W AG SF KCHGER YDP LP IFDGEE++K RL+T GYD+YTP RSYV+HDY+H A W SR+ + AS R+ TLL M G D + + G +GLG KR+++Q + GVD+ +RK++ A+ CG V +VPF+ Sbjct: 25 RNEQAKACRTLSEPKLTTVWAAGLSFLKCHGERLTPYDPNLPGIFDGEEYTKGIRLFTHGYDMYTPHRSYVYHDYSHAKTDGRAHTW--SRKT-----VKASQERIMTLLEMNEG--DKSAEAKAKLGKYGLGPKRTIDQYINFTGVDIRNRKSF----ANACGNVAWVPFQ 183
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: D7FQK5_ECTSI ([Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK5_ECTSI) HSP 1 Score: 150 bits (379), Expect = 2.180e-40 Identity = 75/153 (49.02%), Postives = 101/153 (66.01%), Query Frame = 1 Query: 1 QVRNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHLNAPHAQGWRASRQRD-----EAAELAASNARLWTLLGMPNGATDPAVVEDVRYGTWGLGRKRSLEQLYEYVGV 444 Q RN+QA + MT PKLTTTWGAG+SF KCH ER V YDP L +IFDGEEFSK ARLWT GYDVYTP R ++ HDY+H + WR++++ + + LA N RLW L+ MP + + + ++V+ WGLG +R+L++ E+ G Sbjct: 284 QPRNQQA--IHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQRLA--NQRLWNLMEMPRSSKEGS--KEVQGDPWGLGDRRTLDEFIEFTGT 430
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Match: A0A6H5KPV9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPV9_9PHAE) HSP 1 Score: 150 bits (379), Expect = 9.110e-40 Identity = 80/171 (46.78%), Postives = 102/171 (59.65%), Query Frame = 1 Query: 7 RNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEEFSKFARLWTRGYDVYTPSRSYVFHDYNHLN-APHAQGWRASRQRDEAAELAASNARLWTLLGMPNGATDPAVVEDVRYGTWGLGRKRSLEQLYEYVGVDLSRKTYYGHQADRCGTVDFVPFE 516 R QAK + +PKLT TW AG S KCH +A YDP L ++FDGEEFS ARLWTRGYD YTP +S V HDYN + P W ++ A +LA R++TL GMP + E + G +GLG KR+LEQ E++GV+L+ G RCGT+ +VPFE Sbjct: 244 RYVQAKLATKLPSPKLTNTWAAGLSLAKCHAWKASPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNKVKEGPQPSSWLNNKMVAGAKDLAYK--RMFTLFGMPGKVDTEEIWESI--GQYGLGTKRTLEQYQEFIGVNLTTLEIMG---SRCGTLTYVPFE 407 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13070.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13070.1.1 >prot_P-wetherbeei_contig13070.1.1 ID=prot_P-wetherbeei_contig13070.1.1|Name=mRNA_P-wetherbeei_contig13070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp QVRNEQAKALRLMTAPKLTTTWGAGFSFGKCHGERAVGYDPFLPQIFDGEback to top mRNA from alignment at P-wetherbeei_contig13070:89..1041+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13070.1.1 ID=mRNA_P-wetherbeei_contig13070.1.1|Name=mRNA_P-wetherbeei_contig13070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=953bp|location=Sequence derived from alignment at P-wetherbeei_contig13070:89..1041+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13070:89..1041+ >mRNA_P-wetherbeei_contig13070.1.1 ID=mRNA_P-wetherbeei_contig13070.1.1|Name=mRNA_P-wetherbeei_contig13070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig13070:89..1041+ (Phaeothamnion wetherbeei SAG_119_79)back to top |