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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 2426 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 2424 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185972.8180513-CDS-P-wetherbeei_contig1307:1919..2270 | 1683185972.8180513-CDS-P-wetherbeei_contig1307:1919..2270 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1307 1920..2270 - |
| 1683185972.8255107-CDS-P-wetherbeei_contig1307:2801..3485 | 1683185972.8255107-CDS-P-wetherbeei_contig1307:2801..3485 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1307 2802..3485 - |
| 1683185972.832538-CDS-P-wetherbeei_contig1307:3764..4882 | 1683185972.832538-CDS-P-wetherbeei_contig1307:3764..4882 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1307 3765..4882 - |
| 1683185972.8396127-CDS-P-wetherbeei_contig1307:5123..5394 | 1683185972.8396127-CDS-P-wetherbeei_contig1307:5123..5394 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1307 5124..5394 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1307.1.1 >prot_P-wetherbeei_contig1307.1.1 ID=prot_P-wetherbeei_contig1307.1.1|Name=mRNA_P-wetherbeei_contig1307.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=808bp
LPPAAFEALALSDGLPATLAGLGRRYDVVPLVRLLAFGYVRQLGADPKYA
EGLTTLLGDHHWPLGAMRPLAHEVAAATLAACRQAIATSNGADKKRPRGS
ASSDEKAGVALDPDAPLKAPEAPGAALLEASRGVLGALWQRFPDETGAAI
EDAMCEAEGTKGQAGKLFALLEGTLMGRAVFGPGGGSLQMALQHPSAAVR
VQAAARAEQVLLRDGSAEGGGSEGCTEDDGLGQALLRRLEDEDASVVAAV
LSRKALAAVVAAAAGQPAVGSELASPADASLTAVRKWRHALCNPHPAAPP
RTTGAALATLLRFLAGPLLAAHPEIISAVVSALLLCFPGTAVAAATRIRG
KAVRKPQRKAVVTVCATAVSAAAATGHLLFVGLEGVAADMTAASKKKNKK
GEAKATAAAAAGSEDAAGGDDAVDSGGDTGGAKPHQRLDDWADAVKCVLV
ANVAESSADLDIEELLGSAGAEDDSCRLIAAAVAGALRGDNMAPSARQLL
ARRTAPLLARRARGAAWAMRGLAATIPALPQHLAPGAVVWAEHAGREGQH
GPGGILSLCLLASAGAQPPSAPTPADAAATAKGAKKPSTADGEGPGAIAA
AASAALGALLEHQYRKRPLAGLLALAASAGTAGGAQAAAAVRALCVSAAF
VEVAAGGGGGGGGSAKSMLEVAADATATLPCALLCLGNPQQEVREAAVLY
ATAAAKFLAACEAGAAAPTPAKRPMSSRRKDSSAAAPVNAEAVAALDAAL
GTTAGAAVRAEDVDAAEDTAPAPLVPLDFSTAAVLLRALTDQRAEELALD
TDCLRRCL back to topmRNA from alignment at P-wetherbeei_contig1307:1919..5394- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1307.1.1 ID=mRNA_P-wetherbeei_contig1307.1.1|Name=mRNA_P-wetherbeei_contig1307.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3476bp|location=Sequence derived from alignment at P-wetherbeei_contig1307:1919..5394- (Phaeothamnion wetherbeei SAG_119_79)
CTACCGCCCGCCGCCTTCGAAGCGCTGGCGCTCTCGGATGGCCTGCCGGC
GACGCTCGCGGGGCTCGGCCGGCGCTACGACGTCGTGCCGCTGGTGCGCC
TGCTCGCGTTCGGTTACGTGCGGCAATTGGGGGCCGACCCCAAGTATGCA
GAGGGCTTGACGACTCTACTGGGAGATCATCATTGGCCGCTCGGGGCGAT
GAGGCCGCTGGCGCACGAGGTGGCTGCTGCGACACTCGCCGCCTGCCGTC
AGGCCATCGCGACATCCAACGGTGAGGAGGAGGAGGGATGGCCCTTGAAG
TGTGTGCCTTTTCTTGGGAGTGCTTGTATGTGGCCGCATTTTTCTTGCCG
CTTCTCGTTCCTTGGTCCATCTTTGGTCCATTAGATTAATTATTATGCTC
GGGCAAACCCACATGCAAAGGTTTTAACTTCCTGCCCTCCGTTGAAGCGA
GAGTCTTAATTGTCTTCTCTGTTCGTTCGCTTTTCCTCTTTCTGCCACTG
TCGACACCGCAGGAGCCGATAAAAAGAGACCCAGGGGTTCGGCATCCTCG
GACGAGAAAGCTGGCGTCGCATTAGACCCCGACGCGCCGCTGAAGGCGCC
GGAGGCACCAGGTGCTGCCCTCCTAGAAGCGTCCCGCGGCGTGCTCGGCG
CGCTGTGGCAGCGCTTTCCCGACGAGACGGGCGCCGCCATCGAAGACGCC
ATGTGCGAGGCCGAAGGCACGAAGGGGCAGGCAGGGAAGCTCTTCGCGTT
GCTCGAGGGGACGCTGATGGGGCGCGCCGTCTTCGGGCCCGGTGGCGGCT
CGCTTCAGATGGCGCTCCAGCACCCGTCCGCGGCCGTCCGCGTCCAGGCC
GCCGCGCGCGCCGAACAGGTCTTGCTGCGCGACGGCAGCGCGGAAGGCGG
GGGAAGCGAGGGATGTACGGAAGACGACGGTTTAGGGCAGGCGCTCCTCC
GGCGGCTGGAGGACGAGGATGCGTCGGTGGTGGCGGCGGTGCTCTCCCGC
AAGGCGCTCGCCGCCGTTGTAGCGGCGGCAGCGGGCCAGCCTGCCGTGGG
AAGCGAGCTGGCGTCGCCGGCCGACGCATCGCTGACAGCCGTGCGCAAGT
GGCGGCACGCACTCTGCAACCCGCACCCGGCAGCGCCGCCGCGGACGACG
GGCGCCGCGCTGGCCACACTGCTGCGGTTTCTGGCCGGCCCGCTATTGGC
AGCGCATCCGGAGATTATATCCGCCGTTGTCTCGGCCCTGCTGCTGTGCT
TCCCAGGAACGGCTGTGGCGGCGGCGACCCGCATCCGCGGCAAGGCTGTG
CGCAAGCCCCAGCGCAAGGCTGTCGTGACCGTGTGCGCGACAGCCGTTTC
TGCGGCTGCGGCAACGGGGCACCTCCTCTTTGTGGGCCTGGAGGGCGTGG
CGGCCGACATGACCGCCGCCTCGAAAAAGAAGAACAAGAAGGGCGAGGCG
AAAGCCACGGCGGCGGCTGCTGCTGGCAGTGAGGATGCAGCAGGAGGCGA
TGACGCTGTCGATAGTGGCGGGGATACGGGCGGCGCAAAGCCGCATCAGC
GGCTGGACGATTGGGCAGACGCCGTGAAATGCGTGCTGGTAGCCAACGTG
GCGGAGTCGTCCGCAGATTTGGACATCGAGGTGAGCGTGGGAGACGTGTG
TGTATGCTCTATTGGAGTATTCCGTGTGCGGTCATGGTCGTGATGAAAGC
AATACTTATGTACAACCAGACTTACGTCGTGGTGGCGCTTTTAACTGCAA
TCTGAACCTGACCGCTGATAAGAGCTCGGGAACCACGTCGGCCGCGCTGA
AAGTCTGTAGCCACAGTTTTAAAGTACTGGAAATGGTTTTGACAGCAATA
ATATTCCTGCATCTTTTGGCCCCTTTCCTGTGGCCTCATGTCATGTCTGT
TCGCTGCAGGAGCTGCTGGGCAGCGCCGGCGCGGAAGACGACTCATGCCG
GCTCATCGCTGCGGCGGTCGCGGGGGCGCTGCGAGGCGACAACATGGCGC
CGAGCGCCCGGCAGTTGCTGGCGAGGCGCACCGCGCCGCTGCTGGCGCGG
CGGGCGCGGGGCGCAGCATGGGCGATGCGCGGCCTCGCCGCTACCATCCC
GGCGCTGCCGCAGCACCTCGCACCGGGAGCCGTCGTGTGGGCAGAGCATG
CGGGAAGAGAGGGGCAGCACGGTCCCGGCGGGATCCTGTCGCTTTGCCTC
TTGGCGTCGGCAGGAGCCCAGCCGCCGTCGGCGCCGACGCCGGCCGACGC
CGCAGCCACCGCAAAGGGGGCCAAGAAGCCGTCGACAGCGGACGGCGAAG
GGCCCGGCGCCATTGCGGCGGCGGCGTCGGCGGCACTGGGGGCTCTGCTG
GAGCACCAGTACCGCAAGCGGCCGTTGGCGGGGCTGTTGGCGCTCGCGGC
GTCGGCGGGCACGGCGGGCGGCGCCCAGGCGGCCGCGGCAGTGAGGGCAC
TGTGCGTCTCCGCTGCCTTTGTCGAGGTGGCGGCGGGAGGCGGCGGCGGC
GGCGGCGGATCGGCGAAGTCGATGCTCGAGGTGGCAGCGGACGCGACGGC
AACGCTGCCATGCGCGTTGTTGTGCCTCGGGAACCCTCAGCAGGCGAGCG
CAGTTGCCGATGTGGTGTGCGTGTATCGCTCTTTCTGCTTGGGGTACTGT
CGACAGCTCCCCCAATTATCTTTTCTGCATTTGCCGACCTCGTCCAACTT
TTTTGCCACTCATTAGTCGAATTGCCTGTCAGGCGCTTCGCAGCTTGTTT
GATAGTCGCCCGTGCCTTCAGCCGCTGGCGTTTCGTCAGCGGCTTGGTTT
TGCGTACCGTTGGAGCTACGCACGGGTGGCACTGATAGCAAGCGAGAGGA
AACGGGTGCATCTGAAGTGGCTGGGGCATTCCATTTCTTCGCCCCGGCCG
CTAAACAAGCTGCCCAACATTTCTTTACCACCGGCCAGTTGGAATGCACG
TTGAGTGCACAAACTCCCTTTTCCTTCTTTCTTTTCTTCTGTTTCTGTCG
GTCTATGCGCTATAGTGTACAGTCGCGCAAAAGCAACACGCACAGTACTG
ACCGACTTTATGTACACACTCGCTTTCTGCGGACGAATTTGTTCGCTGTT
TGCTTGATATTGTGAAACCCGCAGGAGGTTCGTGAGGCCGCAGTCCTGTA
CGCTACGGCTGCCGCGAAGTTTCTGGCGGCGTGCGAGGCCGGCGCAGCAG
CGCCGACGCCGGCGAAGCGGCCCATGTCCAGCCGGCGGAAGGATAGCAGC
GCCGCCGCCCCCGTCAACGCCGAGGCGGTTGCGGCGCTCGACGCGGCGCT
CGGGACGACGGCGGGCGCGGCGGTGAGGGCGGAGGACGTCGACGCGGCGG
AGGACACGGCGCCGGCGCCGCTCGTGCCGCTGGACTTCTCCACCGCCGCG
GTGCTGCTACGGGCCCTGACGGACCAGCGGGCAGAGGAACTGGCACTCGA
CACCGACTGCCTGCGGCGCTGCCTGA back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1307:1919..5394- >mRNA_P-wetherbeei_contig1307.1.1 ID=mRNA_P-wetherbeei_contig1307.1.1|Name=mRNA_P-wetherbeei_contig1307.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2424bp|location=Sequence derived from alignment at P-wetherbeei_contig1307:1919..5394- (Phaeothamnion wetherbeei SAG_119_79)
CTACCGCCCGCCGCCTTCGAAGCGCTGGCGCTCTCGGATGGCCTGCCGGC
GACGCTCGCGGGGCTCGGCCGGCGCTACGACGTCGTGCCGCTGGTGCGCC
TGCTCGCGTTCGGTTACGTGCGGCAATTGGGGGCCGACCCCAAGTATGCA
GAGGGCTTGACGACTCTACTGGGAGATCATCATTGGCCGCTCGGGGCGAT
GAGGCCGCTGGCGCACGAGGTGGCTGCTGCGACACTCGCCGCCTGCCGTC
AGGCCATCGCGACATCCAACGGAGCCGATAAAAAGAGACCCAGGGGTTCG
GCATCCTCGGACGAGAAAGCTGGCGTCGCATTAGACCCCGACGCGCCGCT
GAAGGCGCCGGAGGCACCAGGTGCTGCCCTCCTAGAAGCGTCCCGCGGCG
TGCTCGGCGCGCTGTGGCAGCGCTTTCCCGACGAGACGGGCGCCGCCATC
GAAGACGCCATGTGCGAGGCCGAAGGCACGAAGGGGCAGGCAGGGAAGCT
CTTCGCGTTGCTCGAGGGGACGCTGATGGGGCGCGCCGTCTTCGGGCCCG
GTGGCGGCTCGCTTCAGATGGCGCTCCAGCACCCGTCCGCGGCCGTCCGC
GTCCAGGCCGCCGCGCGCGCCGAACAGGTCTTGCTGCGCGACGGCAGCGC
GGAAGGCGGGGGAAGCGAGGGATGTACGGAAGACGACGGTTTAGGGCAGG
CGCTCCTCCGGCGGCTGGAGGACGAGGATGCGTCGGTGGTGGCGGCGGTG
CTCTCCCGCAAGGCGCTCGCCGCCGTTGTAGCGGCGGCAGCGGGCCAGCC
TGCCGTGGGAAGCGAGCTGGCGTCGCCGGCCGACGCATCGCTGACAGCCG
TGCGCAAGTGGCGGCACGCACTCTGCAACCCGCACCCGGCAGCGCCGCCG
CGGACGACGGGCGCCGCGCTGGCCACACTGCTGCGGTTTCTGGCCGGCCC
GCTATTGGCAGCGCATCCGGAGATTATATCCGCCGTTGTCTCGGCCCTGC
TGCTGTGCTTCCCAGGAACGGCTGTGGCGGCGGCGACCCGCATCCGCGGC
AAGGCTGTGCGCAAGCCCCAGCGCAAGGCTGTCGTGACCGTGTGCGCGAC
AGCCGTTTCTGCGGCTGCGGCAACGGGGCACCTCCTCTTTGTGGGCCTGG
AGGGCGTGGCGGCCGACATGACCGCCGCCTCGAAAAAGAAGAACAAGAAG
GGCGAGGCGAAAGCCACGGCGGCGGCTGCTGCTGGCAGTGAGGATGCAGC
AGGAGGCGATGACGCTGTCGATAGTGGCGGGGATACGGGCGGCGCAAAGC
CGCATCAGCGGCTGGACGATTGGGCAGACGCCGTGAAATGCGTGCTGGTA
GCCAACGTGGCGGAGTCGTCCGCAGATTTGGACATCGAGGAGCTGCTGGG
CAGCGCCGGCGCGGAAGACGACTCATGCCGGCTCATCGCTGCGGCGGTCG
CGGGGGCGCTGCGAGGCGACAACATGGCGCCGAGCGCCCGGCAGTTGCTG
GCGAGGCGCACCGCGCCGCTGCTGGCGCGGCGGGCGCGGGGCGCAGCATG
GGCGATGCGCGGCCTCGCCGCTACCATCCCGGCGCTGCCGCAGCACCTCG
CACCGGGAGCCGTCGTGTGGGCAGAGCATGCGGGAAGAGAGGGGCAGCAC
GGTCCCGGCGGGATCCTGTCGCTTTGCCTCTTGGCGTCGGCAGGAGCCCA
GCCGCCGTCGGCGCCGACGCCGGCCGACGCCGCAGCCACCGCAAAGGGGG
CCAAGAAGCCGTCGACAGCGGACGGCGAAGGGCCCGGCGCCATTGCGGCG
GCGGCGTCGGCGGCACTGGGGGCTCTGCTGGAGCACCAGTACCGCAAGCG
GCCGTTGGCGGGGCTGTTGGCGCTCGCGGCGTCGGCGGGCACGGCGGGCG
GCGCCCAGGCGGCCGCGGCAGTGAGGGCACTGTGCGTCTCCGCTGCCTTT
GTCGAGGTGGCGGCGGGAGGCGGCGGCGGCGGCGGCGGATCGGCGAAGTC
GATGCTCGAGGTGGCAGCGGACGCGACGGCAACGCTGCCATGCGCGTTGT
TGTGCCTCGGGAACCCTCAGCAGGAGGTTCGTGAGGCCGCAGTCCTGTAC
GCTACGGCTGCCGCGAAGTTTCTGGCGGCGTGCGAGGCCGGCGCAGCAGC
GCCGACGCCGGCGAAGCGGCCCATGTCCAGCCGGCGGAAGGATAGCAGCG
CCGCCGCCCCCGTCAACGCCGAGGCGGTTGCGGCGCTCGACGCGGCGCTC
GGGACGACGGCGGGCGCGGCGGTGAGGGCGGAGGACGTCGACGCGGCGGA
GGACACGGCGCCGGCGCCGCTCGTGCCGCTGGACTTCTCCACCGCCGCGG
TGCTGCTACGGGCCCTGACGGACCAGCGGGCAGAGGAACTGGCACTCGAC
ACCGACTGCCTGCGGCGCTGCCTG back to top
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