mRNA_P-wetherbeei_contig13047.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: D7FUY2_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUY2_ECTSI) HSP 1 Score: 172 bits (435), Expect = 6.120e-50 Identity = 83/130 (63.85%), Postives = 102/130 (78.46%), Query Frame = 1 Query: 1 VRGARGFRHLPGQYGPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETRHPVPTRRADGMLSNVISSFEKV 390 ++GARG+R GQYG GGRSSVN+ TVA+FGATGFLGR+VTN+LG+ GTRC++PNRGCEM+ R K FDLGQ FPFY DE S+R AI +AD VVNLIGK+YET+H TR+ DG ++ V SSF+ V Sbjct: 15 LQGARGYRKHLGQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGNADTVVNLIGKHYETKHLCFTRKEDGAINRVNSSFKNV 144
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: F0XY56_AURAN (RmlD_sub_bind domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY56_AURAN) HSP 1 Score: 141 bits (355), Expect = 6.680e-38 Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 22 RHLPGQYGPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETRHPVPTRRADGMLSNVISSFEKV 390 +H G+YG GGR SV+ V A+FG GFLGRYV +++G+IGTR + NRGCE+E R LK FD GQ PFY DE SI I A+VVVN++GKYYETR+ VPT+RADG SNV S+E+V Sbjct: 43 QHRVGEYGLGGRHSVSGVRCALFGGIGFLGRYVCSEMGKIGTRVRVGNRGCELEARHLKVSFDHGQFHAPFYSARDEASIAEVIGRANVVVNMVGKYYETRNVVPTKRADGAYSNVNYSYEEV 165
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: A0A7S3HC55_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC55_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.290e-37 Identity = 68/116 (58.62%), Postives = 85/116 (73.28%), Query Frame = 1 Query: 43 GPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETRHPVPTRRADGMLSNVISSFEKV 390 GPGGRSS + +T +FGA GF+GRY ++LG+ G+R Y+P RGCEME R LKPMFDLGQ + P D SI A+ +DVV+N+IGK+YET+H VPTRRADG LS V FE+V Sbjct: 33 GPGGRSSNSGITATVFGAYGFVGRYFVDELGKRGSRVYIPYRGCEMEIRHLKPMFDLGQLGLMPFSPRDRESICEAVKKSDVVINMIGKHYETKHIVPTRRADGNLSRVNYDFEEV 148
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: A0A7S1TSG5_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSG5_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.680e-36 Identity = 69/115 (60.00%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 43 GPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETRHPVPTRRADGMLSNVISSFEK 387 G GGRS+ + V +FGA GFLGRYV N LGQ G LPNRGCEME R L PMFDLGQA +P YH DE SIRAA+A AD+V++L+GK YET+ VPT+RADG + V ++E+ Sbjct: 91 GRGGRSTSSGKRVVVFGAGGFLGRYVCNVLGQQGHVTVLPNRGCEMEYRHLHPMFDLGQAAYPLYHGKDEASIRAAVAGADMVISLVGKQYETKAMVPTKRADGTTTRVNFTYEE 205
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: A0A836CC16_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC16_9STRA) HSP 1 Score: 135 bits (340), Expect = 7.460e-36 Identity = 62/104 (59.62%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 79 VAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETRHPVPTRRADGMLSNVISSFEKV 390 + IFGATGFLGRYV ++LGQ+ R +PNRGCEME R LKPMF LG A FPFY DE S+R AI ++D+V+NL+GKYYET+H + TRRADG S + F ++ Sbjct: 31 ITIFGATGFLGRYVASRLGQLKARTNMPNRGCEMEIRHLKPMFSLGDAHFPFYSIRDETSVRQAIGESDIVINLVGKYYETKHIMKTRRADGTKSRINYGFAEI 134
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: A0A6U0YMP2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0YMP2_9STRA) HSP 1 Score: 130 bits (328), Expect = 5.010e-34 Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 10 ARGFRHLPGQYGPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETRHPVPT 339 ARG+R GQ+G GGRSSV+ + VA+FG TGFLGRYV N+ G+IG+ Y+ RG EME R LKPMFDLG +Y DE SIR I AD+VVNL+GK +ET+H VPT Sbjct: 26 ARGYRTAVGQFGHGGRSSVSGLKVALFGGTGFLGRYVANEFGKIGSTAYVGTRGSEMEARHLKPMFDLGNLAIYYYDGRDEDSIRDIIRGADLVVNLVGKTFETKHVVPT 135
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: A0A7S2G5Q4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5Q4_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.620e-33 Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 28 LPGQYGPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETRHPVPTRRADGMLSNVISS 378 + G+ G GGRSS++ + VA+FGATGFLGRYV N+LG+ GT + NRGCEMETR L+PMFDLG FY P D+ SIR I D+V+N+IGK YETR +PT DG L + S Sbjct: 38 VSGEQGHGGRSSISGLKVAVFGATGFLGRYVVNELGKTGTTVTIGNRGCEMETRHLRPMFDLGNMAIEFYSPRDDDSIRRTIEGCDIVINMIGKRYETRKLLPTS-PDGALDPIKGS 153
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: A0A8J2SDM8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDM8_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.170e-31 Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 1 Query: 34 GQYGPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETRHPVPTRRADGMLSNVISSFEK 387 G+YG GGR SV+ V ++FGATGFLGRYV +++G++GTR + NRG + ETR LK FD GQ PFY P D S++ I A VN++GKYYET+ VPT++ DG S V S+E+ Sbjct: 38 GEYGLGGRHSVSGVRASLFGATGFLGRYVCSEMGKVGTRVRVGNRGSDDETRHLKVSFDHGQFHAPFYSPRDAASVQDVIGRATCTVNMVGKYYETKGVVPTKKPDGSKSRVNYSYEE 155
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: A0A7S2UDV5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDV5_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.720e-30 Identity = 61/97 (62.89%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 34 GQYGPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETR 324 G+ GPGGRSSV + VA+FGA+GFLGRYV LG GT YL NRG + E R+LKPMFDLG++ F FY D S+ IADADVV+NLIGKYYET+ Sbjct: 38 GEAGPGGRSSVAGLKVAVFGASGFLGRYVCENLGVNGTLTYLGNRGDDFEMRWLKPMFDLGRSKFVFYSSRDRQSMADVIADADVVINLIGKYYETK 134
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Match: A0A7S1UWU6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWU6_9STRA) HSP 1 Score: 120 bits (302), Expect = 4.780e-30 Identity = 61/100 (61.00%), Postives = 72/100 (72.00%), Query Frame = 1 Query: 43 GPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRCYLPNRGCEMETRFLKPMFDLGQAWFPFYHPDDEPSIRAAIADADVVVNLIGKYYETRHPVPTR 342 GPGGR+S ++ VAIFGATGFLGRYV ++LG G Y+ NRG EME R LK FDLG+ F FY P D S+ IADAD+VVNLIGKY+ET PV T+ Sbjct: 57 GPGGRASNADLKVAIFGATGFLGRYVCSELGANGVLAYIANRGDEMEARHLKVCFDLGRTRFVFYSPRDRESVEDVIADADIVVNLIGKYHETGQPVETK 156 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13047.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13047.1.1 >prot_P-wetherbeei_contig13047.1.1 ID=prot_P-wetherbeei_contig13047.1.1|Name=mRNA_P-wetherbeei_contig13047.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp VRGARGFRHLPGQYGPGGRSSVNNVTVAIFGATGFLGRYVTNKLGQIGTRback to top mRNA from alignment at P-wetherbeei_contig13047:897..1576+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13047.1.1 ID=mRNA_P-wetherbeei_contig13047.1.1|Name=mRNA_P-wetherbeei_contig13047.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=680bp|location=Sequence derived from alignment at P-wetherbeei_contig13047:897..1576+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13047:897..1576+ >mRNA_P-wetherbeei_contig13047.1.1 ID=mRNA_P-wetherbeei_contig13047.1.1|Name=mRNA_P-wetherbeei_contig13047.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig13047:897..1576+ (Phaeothamnion wetherbeei SAG_119_79)back to top |