mRNA_P-wetherbeei_contig13038.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13038.1.1
Unique NamemRNA_P-wetherbeei_contig13038.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: A0A2E8VVZ9_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8VVZ9_9GAMM)

HSP 1 Score: 579 bits (1492), Expect = 5.900e-205
Identity = 283/409 (69.19%), Postives = 324/409 (79.22%), Query Frame = 1
Query:   31 EASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPHVGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGR------------------------------KVSGKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGGPFRDVPRN 1167
            EAS+ +EVRAWL +HWD  RSLV WRN+LADSGWGMPHWP AWYG+ LP A+ P++EE F   GAVGVA+ GIR LAAATLLEHG+D+HK ++LRRILTGED+WCQLFSEPGSGSDLAGATTRAD+DG+ WVVNGQK+WTTSAHHA+WGLLLARTDWDAPKH G++YF+IDM Q  +EVQPL+QMNGHASFNQVFF+DA +PA+N V  IG+GWK+AMTTLAHERR AD LR        VG IYE+ER EI TVMEPYKWYPQRAGRVDLVLPRA +TG                               +  G+ +GPEGSLGKLA+S+VA+ AA VHT ++G  AML GSDS  DG+IAEILLSVPATSIAGGTDEIQRNII ERVL + +EPRMD GPFRDVPRN
Sbjct:    9 EASIGAEVRAWLAEHWDPNRSLVDWRNMLADSGWGMPHWPEAWYGKALPGAITPVIEEAFAEIGAVGVAKTGIRTLAAATLLEHGTDAHKEKYLRRILTGEDTWCQLFSEPGSGSDLAGATTRADRDGDHWVVNGQKVWTTSAHHADWGLLLARTDWDAPKHQGLTYFVIDMLQDGVEVQPLRQMNGHASFNQVFFTDALVPAENQVSAIGNGWKVAMTTLAHERRGADGLRGASSEVERVGSIYEEERREIETVMEPYKWYPQRAGRVDLVLPRARETGAINDPVTRQEIARLLVMAKSAEWTARRARAAQEQGRPQGPEGSLGKLASSNVAKLAARVHTMVTGESAMLGGSDSAMDGVIAEILLSVPATSIAGGTDEIQRNIIAERVLGMEKEPRMDTGPFRDVPRN 417          
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: A0A6N9BUY9_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6N9BUY9_9GAMM)

HSP 1 Score: 574 bits (1480), Expect = 3.810e-203
Identity = 283/414 (68.36%), Postives = 322/414 (77.78%), Query Frame = 1
Query:   16 MSAHDEASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPHVGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGR------------------------------KVSGKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGGPFRDVPRN 1167
            MS   EA +R+EVR WL+ HWD  R LV WRN+LAD+GWG+PHWPR W+G  LPV +   V+EEF   GAVGVA+ GIRLLAAATLLEHG+D HK RFLRRILTGED+WCQLFSEPGSGSDLAGATTRAD DG+ WVVNGQK+WTTSAHHA +GLLLARTDWD PKH G++YF++DM Q  +EV+ L+QMNGHASFNQVFF+DARIP +  V + G+GW++AMTTLAHERR ADALR    A   VG IYE+E  EIAT+MEPYKWYPQRAGRVDLVLPRA +TGR                              +  G+ +GPEGSLGKLAASHVARAAA VHT ISGA+AML+G D P  G IAEIL+SVPATSIAGGTDEIQRNII ERVL +P+EPRMD GPFRDVPRN
Sbjct:    1 MSERSEAEIRAEVRQWLEAHWDPDRPLVEWRNMLADAGWGVPHWPREWFGLGLPVPVSQAVDEEFAKIGAVGVAKAGIRLLAAATLLEHGNDFHKERFLRRILTGEDTWCQLFSEPGSGSDLAGATTRADFDGQQWVVNGQKVWTTSAHHAHYGLLLARTDWDVPKHQGLTYFVLDMEQPGVEVRQLRQMNGHASFNQVFFTDARIPPEYRVSETGNGWRVAMTTLAHERRGADALRTHASARERVGRIYEEEAREIATIMEPYKWYPQRAGRVDLVLPRARETGRLDDPVVRQEVAKLLTLVKSAEWTARRARAAQEQGRPQGPEGSLGKLAASHVARAAARVHTLISGADAMLSGDDGPRAGTIAEILVSVPATSIAGGTDEIQRNIIAERVLGMPKEPRMDTGPFRDVPRN 414          
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: UPI0010804846 (acyl-CoA dehydrogenase family protein n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0010804846)

HSP 1 Score: 561 bits (1446), Expect = 5.070e-198
Identity = 274/411 (66.67%), Postives = 320/411 (77.86%), Query Frame = 1
Query:   28 DEASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPHVGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGR------------------------------KVSGKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGG-PFRDVPRN 1167
            DEA+VR+EVRAWL+ HWD +R LVAWR++LA+SGWG+PHWPR WYGRDLPV L+P+VEEEF   GAVGVA+ GIR+LAAAT+L HG+  HK RFLRRILTGED+WCQLFSEPGSGSD+A A TRA+  G  WV+NGQK+WTTSAHHA+WGLLLARTDWD PKH G+S+FIIDMRQ  +E +PL+QMNG+ASFNQVF +DA +P + LVG++G+GW +A TTL HERR ADALR W   S   G IYE+ER EIATVMEPY+WYPQRAGRVDLV+ RA   GR                              +  G+ +GPEGSLGKL ASHVARAAA VHTQI+GA+A+L+G D P  GLIAEILLSVPATSIAGGTDEIQRNII ERVL +P+EP  D   PFR+VPRN
Sbjct:    2 DEAAVRAEVRAWLEAHWDPERGLVAWRHMLAESGWGVPHWPREWYGRDLPVGLVPVVEEEFRRIGAVGVAKAGIRMLAAATILAHGTRLHKERFLRRILTGEDTWCQLFSEPGSGSDVAAAVTRAEFRGNRWVINGQKVWTTSAHHADWGLLLARTDWDRPKHKGLSFFIIDMRQPGVEARPLRQMNGYASFNQVFLTDAEVPPEFLVGEVGEGWAVATTTLMHERRGADALRSWALGSDRPGRIYEEERAEIATVMEPYRWYPQRAGRVDLVMERARAAGRLGDPVLRQEIAKLLTLSRAAEWLARRARTAQEQGRPQGPEGSLGKLVASHVARAAARVHTQIAGADALLSGEDGPMGGLIAEILLSVPATSIAGGTDEIQRNIIAERVLRMPKEPNPDADRPFREVPRN 412          
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: A0A2V9JIJ8_9BACT (Acyl-CoA dehydrogenase n=2 Tax=Bacteria TaxID=2 RepID=A0A2V9JIJ8_9BACT)

HSP 1 Score: 556 bits (1433), Expect = 4.640e-196
Identity = 274/414 (66.18%), Postives = 315/414 (76.09%), Query Frame = 1
Query:   16 MSAHDEASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPHVGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGRKVS------------------------------GKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGGPFRDVPRN 1167
            MS   E  VR+EVRAWL  +WD + SLVAWRN L DSGWGMPHWP AWYGR LP+ L+  VEEEF   GAVGVA+ G+RLLAAATLLEHG+D  K RFLRRILTGED+WCQLFSEPGSGSDLAGATTRAD  G+ W++NGQK+WTTSAHHA+ GLLLARTDWDAPKH G+SYF+ID++Q  ++VQPLKQMNGHASFNQVFF+DA +PA+NLVG+IG+GWK+AMTTLAHERR AD L          G IY +ER E+ T  +PY WYPQRAGRVDL+L RA +TG                                  G+ +GPEGSLGKLAASHVARAAAHVHT ++GA+A+L G  SP DG+IAEIL+SVPA SIAGGTDEIQRNII ERVL LP+EPR D GPFR V +N
Sbjct:    1 MSKVSETDVRAEVRAWLAANWDPEMSLVAWRNKLVDSGWGMPHWPEAWYGRGLPLGLVRAVEEEFARIGAVGVAKSGVRLLAAATLLEHGTDRQKERFLRRILTGEDTWCQLFSEPGSGSDLAGATTRADLHGDYWLINGQKVWTTSAHHADHGLLLARTDWDAPKHEGLSYFVIDIKQPGVDVQPLKQMNGHASFNQVFFTDAHVPAENLVGRIGEGWKVAMTTLAHERRGADGLSAPAKRGARTGRIYVEERRELETANQPYTWYPQRAGRVDLILDRAKETGANTDPHVRQEIAKLMILAKSAEWTARRARAAQQQGRPQGPEGSLGKLAASHVARAAAHVHTLMTGADALLTGPGSPRDGIIAEILVSVPAISIAGGTDEIQRNIIAERVLGLPKEPRFDTGPFRQVRKN 414          
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: A0A6L7XV79_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7XV79_9GAMM)

HSP 1 Score: 554 bits (1428), Expect = 3.200e-195
Identity = 275/407 (67.57%), Postives = 317/407 (77.89%), Query Frame = 1
Query:   37 SVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPHVGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGRKVS------------------------------GKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGGPFRDVPRN 1167
            SVR EVR WL+ +WD    LVAWRNLLADSGWGMP WPR W+GRDLP AL P+V+EEF   GAVGVA+ GIRLLAAATLLEHGSD+HK+ FL RILTGED+WCQLFSEPGSGSDLAGATTRAD+ G+ ++VNGQK+WTTSAHHA++GLLLARTDWD PKH G++YF++DMRQ  ++V+PLKQMNGHASFNQVFF+DA +PA+NLV  +G+GW++A+TTL HERR AD LR         G IYEQER+EIA  +EPYKWYPQRAGRVDLVL RA  TGR                                 G+ +GPEGSLGKLA+S++AR A+HVHT I+GA AMLAG D    GLIAEIL+SVPATSIAGGTDEIQRNII ERVL LP+EPRMD GPFRDV RN
Sbjct:   13 SVRREVREWLEANWDPNEDLVAWRNLLADSGWGMPVWPRQWHGRDLPQALAPVVDEEFARLGAVGVAKTGIRLLAAATLLEHGSDAHKATFLHRILTGEDTWCQLFSEPGSGSDLAGATTRADRHGDHFLVNGQKVWTTSAHHADYGLLLARTDWDVPKHQGLTYFVLDMRQEGVDVRPLKQMNGHASFNQVFFTDAVVPAENLVSAVGNGWQVAITTLMHERRGADGLRGVQRERDLPGRIYEQEREEIAVALEPYKWYPQRAGRVDLVLERAQATGRNTDPATRQEIAKLLTMARSAEWTARRARAAQQQGRPQGPEGSLGKLASSNIARQASHVHTLIAGANAMLAGEDGDLGGLIAEILVSVPATSIAGGTDEIQRNIIAERVLGLPKEPRMDTGPFRDVKRN 419          
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: A0A2E8KA34_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8KA34_9GAMM)

HSP 1 Score: 551 bits (1419), Expect = 7.470e-194
Identity = 274/418 (65.55%), Postives = 316/418 (75.60%), Query Frame = 1
Query:    4 GGCRMSAHDEASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPHVGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGR------------------------------KVSGKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGGPFRDVPRN 1167
            GG  MS  D  +V+ EVR WLQ++WD   SLV WRN LADSGWG+P WPR WYGRDLPVA+LP +EEEF    A+GVAR GIR+LAAAT+LEHGSD HK  FLRRILTGED+WCQLFSEPGSGSDLAGATTRAD DGE W++NGQKLWTTSAHHA++GLLLARTDWD PKH G++YFI+DM Q  ++V  +KQMNGHASFNQVF +DA I   + V + G GW++AMTTLAHERRNAD + R    S   G IYE+ER E+ATVMEPYKWYPQRAGRVDLV+PRA  TGR                              +  G  +GPEGSLGKL+AS+VAR A+ VHT ISGA+A+L GSD   DGLIAE+L+SVPA SIAGGTDEIQRNII ERVL + +EPR D GPF+DVPRN
Sbjct:    2 GGRDMS--DLTAVKEEVRTWLQENWDDSLSLVEWRNRLADSGWGVPDWPRQWYGRDLPVAILPEIEEEFAEINAIGVARSGIRMLAAATILEHGSDMHKKEFLRRILTGEDTWCQLFSEPGSGSDLAGATTRADFDGENWIINGQKLWTTSAHHADYGLLLARTDWDVPKHQGLTYFILDMTQPGVDVHQVKQMNGHASFNQVFITDATIAPQHRVDEEGAGWRVAMTTLAHERRNADGMNRLNRDSGLPGAIYEEERKEVATVMEPYKWYPQRAGRVDLVMPRAQQTGRIEDAGIRQEIAKLLIMSKSAEWTARRARAAQEQGMPQGPEGSLGKLSASNVARQASRVHTLISGADALLTGSDGAMDGLIAEVLVSVPAVSIAGGTDEIQRNIISERVLGMEKEPRFDSGPFKDVPRN 417          
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: A0A523LXF7_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523LXF7_9GAMM)

HSP 1 Score: 550 bits (1417), Expect = 5.240e-193
Identity = 279/423 (65.96%), Postives = 315/423 (74.47%), Query Frame = 1
Query:    1 DGGCRMSAHDEASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRW----GHASPHVGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGR------------------------------KVSGKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGGPFRDVPRN 1167
            DG   MS   E+SVR++V  WL+ +WD    L  WRN L DSGWGMP WP  W+GRD   +L+  VE+EF   GA+GVAR GIRLLAAATLLEHGS +HK +FLRRILTGED+WCQLFSEPGSGSDLAGATTRAD DG+ WVVNGQKLWTTSAHHA WGLLLARTDWDAPKH G+SYF+IDMRQ  ++VQPL QMNGHASFNQVFF DA +   +L+G+IG GW++AMTTLAHERR AD LR      G     VG IY++E+ E ATVMEPY WYPQRAGRVDL L RA D+GR                              +  GK +GPEGSLGKLAASHVARAAA VHT ISGA+AMLAGSD   DG++AEILLSVPA SIAGGTDEIQRNII ERVL +P+E R D GPFRDVP+N
Sbjct:   22 DGATGMSEPSESSVRADVSGWLESNWDPDLGLNEWRNKLVDSGWGMPEWPTDWFGRDFSASLVRAVEQEFAKQGAIGVARGGIRLLAAATLLEHGSTAHKEQFLRRILTGEDNWCQLFSEPGSGSDLAGATTRADLDGDQWVVNGQKLWTTSAHHANWGLLLARTDWDAPKHEGLSYFVIDMRQPGVDVQPLAQMNGHASFNQVFFDDAVVERGHLIGEIGKGWQVAMTTLAHERRRADGLRSGYSDVGADIERVGRIYDEEQVETATVMEPYTWYPQRAGRVDLALSRALDSGRIEDPTVRQELAKLLILSSSAEWTARRARAAQQMGKPQGPEGSLGKLAASHVARAAARVHTLISGADAMLAGSDGAEDGIVAEILLSVPAVSIAGGTDEIQRNIIAERVLQMPKETRFDKGPFRDVPKN 444          
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: A0A6A7KSY6_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KSY6_9PROT)

HSP 1 Score: 548 bits (1413), Expect = 5.890e-193
Identity = 272/415 (65.54%), Postives = 317/415 (76.39%), Query Frame = 1
Query:   16 MSAHDEASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPHVGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGR------------------------------KVSGKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGG-PFRDVPRN 1167
            MS  DE ++R+E RAWL+ +W     LV WRN+LAD+GWGMP WP+ WYGR LP  L P+VEEEF+  GAVGVAR+GIR+LAAATLLEHGS  HK +FLRRILTGED+WCQLFSEPG GSDLAGATTRA+  G  W+VNGQK+WTTSAHHA++GLLLARTDWDAPKH G+SYF+ID+ Q  +EV PL+QMNGHASFNQVF +DA +  + +VG +G+GWKIA TTL +ERRNAD+LRR+   +   G  Y +ER EI TVMEPYKWYPQRAGRVDLV+ RA  TGR                              +  G+ +GPEGSLGKL ASHVARAAAHVHT +SGA+AMLAG D P DG+IAEILLSVPATSIAGGTDEIQRNII ERVL +P+EPR D   PFR+VPRN
Sbjct:    1 MSDFDEQAIRAEARAWLEANWSPDLGLVEWRNMLADTGWGMPAWPKEWYGRGLPAGLAPVVEEEFQRIGAVGVARMGIRMLAAATLLEHGSRMHKEKFLRRILTGEDAWCQLFSEPGCGSDLAGATTRAELKGNRWIVNGQKVWTTSAHHAQYGLLLARTDWDAPKHKGLSYFVIDIDQPGVEVYPLRQMNGHASFNQVFLTDAEVAPEFMVGALGEGWKIATTTLMNERRNADSLRRYAQPNFKPGRAYAEERAEIETVMEPYKWYPQRAGRVDLVVERAKATGRNADPTVRQEIAKLLILSKTAEWTARRARAAQAQGRPQGPEGSLGKLIASHVARAAAHVHTLVSGADAMLAGKDGPLDGVIAEILLSVPATSIAGGTDEIQRNIIAERVLKMPKEPRTDTDRPFREVPRN 415          
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: A0A2D9JJF4_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9JJF4_9GAMM)

HSP 1 Score: 545 bits (1403), Expect = 2.020e-191
Identity = 271/416 (65.14%), Postives = 319/416 (76.68%), Query Frame = 1
Query:   16 MSAHDEASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPH-VGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGR------------------------------KVSGKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGG-PFRDVPRN 1167
            MS  +EA +R+EVR WL+++WD  R LV WRN+LADSGWGMP WP AWYGRDLPV L P+VEE F   GA+GVAR G+R+L AATLLEHGSD HKS+FLRRILTGED+WCQLFSEPGSGSDLAG TTRA+  G  WVV+GQK+W+TSAH A+WG+LLARTDWDA KH G+SYF+IDM Q  +E +PL+QMNG+ASFN+VF ++A +P D LVG+ G GW+IA TTL HERRNADALR+WG       G IYE+E  EIATVMEPY+WYPQRAGRVDL+L RA DTG+                              +  G+ +GPEGSLGKLA+SHVARAAA VHT +SG++AMLAG D   DGLIAEILLSVPATSIAGGTDEIQRNII ERVL +P+E R+D G PF +V +N
Sbjct:    1 MSESNEADLRAEVRTWLEENWDPNRGLVEWRNILADSGWGMPTWPSAWYGRDLPVGLGPVVEEAFRDFGAIGVARSGVRMLVAATLLEHGSDLHKSKFLRRILTGEDTWCQLFSEPGSGSDLAGLTTRAEFQGNQWVVSGQKVWSTSAHKADWGVLLARTDWDAHKHAGLSYFVIDMSQPGVEARPLQQMNGYASFNEVFMTEATVPPDMLVGETGQGWQIATTTLMHERRNADALRQWGRPDAGGKGQIYEEEAAEIATVMEPYRWYPQRAGRVDLILKRARDTGKLDDPVVRQEIAKLLTMSKSAEWTARRARAAQELGRPQGPEGSLGKLASSHVARAAAQVHTMLSGSDAMLAGEDGAEDGLIAEILLSVPATSIAGGTDEIQRNIISERVLKMPKENRVDTGRPFSEVRKN 416          
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Match: A0A6N6ZSN6_9PROT (Putative acyl-CoA dehydrogenase n=9 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6N6ZSN6_9PROT)

HSP 1 Score: 544 bits (1401), Expect = 3.930e-191
Identity = 269/415 (64.82%), Postives = 310/415 (74.70%), Query Frame = 1
Query:   16 MSAHDEASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYGRDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLRRILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHHAEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVFFSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPHVGPIYEQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGR------------------------------KVSGKAEGPEGSLGKLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAGGTDEIQRNIIGERVLDLPREPRMDGG-PFRDVPRN 1167
            MS   E SVR+EVRAWL+ +W+ +  LV WRN LADSGWG+P WP+ WYGRDLP AL+P+V EEF   GA+GVA+ GIR LAAAT+L HG+D HK +FLRRILTGED+WCQLFSEPGSGSD+AGA TRA+  G  W+VNGQK+WTTSAHHA WGLLLARTDWD  KH G+SYFIIDM Q  + VQPLKQMNGHASFNQVF +DA +  + LV  +GDGW +  TTL HERR AD LR W   S   G  Y++ER EIAT MEPYKWYPQRAGRVDL+L RA +TGR                                 GK +GPEGSLGKL ASHVARAAA VHTQ+SGA+A+L+G DSP +G+IAEIL+SVPATSIAGGTDEIQRNII ERVL +P+EP +D   PFRDVPRN
Sbjct:    1 MSELTEDSVRAEVRAWLEANWNPELGLVEWRNKLADSGWGVPDWPKEWYGRDLPAALVPVVAEEFTRIGAIGVAKAGIRTLAAATILAHGTDLHKEKFLRRILTGEDTWCQLFSEPGSGSDVAGAVTRAEMQGNKWIVNGQKVWTTSAHHAHWGLLLARTDWDQTKHKGLSYFIIDMHQPGVNVQPLKQMNGHASFNQVFLTDAVVEPEFLVANVGDGWAVTTTTLMHERRGADGLRTWAMGSDRKGRAYDEERAEIATTMEPYKWYPQRAGRVDLILSRAKETGRYEDPVVRQEIARLLIMSKAAEWTARRARAAAQQGKPQGPEGSLGKLVASHVARAAARVHTQLSGADALLSGPDSPMNGVIAEILVSVPATSIAGGTDEIQRNIISERVLKMPKEPSIDTTKPFRDVPRN 415          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13038.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8VVZ9_9GAMM5.900e-20569.19Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria... [more]
A0A6N9BUY9_9GAMM3.810e-20368.36Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria... [more]
UPI00108048465.070e-19866.67acyl-CoA dehydrogenase family protein n=1 Tax=Cren... [more]
A0A2V9JIJ8_9BACT4.640e-19666.18Acyl-CoA dehydrogenase n=2 Tax=Bacteria TaxID=2 Re... [more]
A0A6L7XV79_9GAMM3.200e-19567.57Acyl-CoA dehydrogenase n=2 Tax=Gammaproteobacteria... [more]
A0A2E8KA34_9GAMM7.470e-19465.55Acyl-CoA dehydrogenase n=2 Tax=Gammaproteobacteria... [more]
A0A523LXF7_9GAMM5.240e-19365.96Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria... [more]
A0A6A7KSY6_9PROT5.890e-19365.54Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria... [more]
A0A2D9JJF4_9GAMM2.020e-19165.14Acyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria... [more]
A0A6N6ZSN6_9PROT3.930e-19164.82Putative acyl-CoA dehydrogenase n=9 Tax=Alphaprote... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13038contigP-wetherbeei_contig13038:419..1603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000038_gene1777
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size1185
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.16e-191
EggNOG OGsCOG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TQRA@28211|Alphaproteobacteria,2JPQZ@204441|Rhodospirillales
DescriptionAcyl-CoA dehydrogenase, middle domain
Cds size1170
COG categoryI
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185971.7838063-UTR-P-wetherbeei_contig13038:418..4331683185971.7838063-UTR-P-wetherbeei_contig13038:418..433Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13038 419..433 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185971.7938998-CDS-P-wetherbeei_contig13038:433..16031683185971.7938998-CDS-P-wetherbeei_contig13038:433..1603Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13038 434..1603 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13038.1.1prot_P-wetherbeei_contig13038.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13038 434..1603 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13038.1.1

>prot_P-wetherbeei_contig13038.1.1 ID=prot_P-wetherbeei_contig13038.1.1|Name=mRNA_P-wetherbeei_contig13038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=390bp
MSAHDEASVRSEVRAWLQQHWDIQRSLVAWRNLLADSGWGMPHWPRAWYG
RDLPVALLPIVEEEFEACGAVGVARIGIRLLAAATLLEHGSDSHKSRFLR
RILTGEDSWCQLFSEPGSGSDLAGATTRADQDGEGWVVNGQKLWTTSAHH
AEWGLLLARTDWDAPKHTGMSYFIIDMRQAAIEVQPLKQMNGHASFNQVF
FSDARIPADNLVGKIGDGWKIAMTTLAHERRNADALRRWGHASPHVGPIY
EQERDEIATVMEPYKWYPQRAGRVDLVLPRAHDTGRKVSGKAEGPEGSLG
KLAASHVARAAAHVHTQISGAEAMLAGSDSPHDGLIAEILLSVPATSIAG
GTDEIQRNIIGERVLDLPREPRMDGGPFRDVPRNPQRGR*
back to top

mRNA from alignment at P-wetherbeei_contig13038:419..1603+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13038.1.1 ID=mRNA_P-wetherbeei_contig13038.1.1|Name=mRNA_P-wetherbeei_contig13038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig13038:419..1603+ (Phaeothamnion wetherbeei SAG_119_79)
GACGGAGGCTGCCGCATGAGTGCCCATGACGAAGCCTCGGTGCGCAGCGA AGTGCGTGCCTGGTTGCAGCAACACTGGGACATCCAACGCAGTCTCGTGG CGTGGCGTAATCTGCTCGCCGACAGCGGCTGGGGCATGCCCCATTGGCCG CGCGCGTGGTATGGCCGCGATCTGCCGGTCGCCCTGCTGCCGATAGTGGA AGAAGAATTCGAAGCCTGTGGCGCGGTCGGCGTGGCGCGCATCGGCATCC GCCTGCTGGCGGCAGCAACCCTGCTCGAACATGGCTCGGACTCGCACAAG TCGCGCTTCCTGCGCCGCATCCTGACCGGCGAAGACAGTTGGTGTCAGTT GTTCAGCGAACCGGGCAGTGGTTCCGACCTGGCCGGTGCGACCACTCGCG CGGACCAGGATGGTGAGGGCTGGGTGGTGAACGGGCAAAAGCTGTGGACC ACCAGTGCCCATCATGCGGAGTGGGGCTTGCTGCTCGCGCGCACCGACTG GGACGCGCCGAAACATACCGGCATGTCTTACTTCATCATCGACATGCGGC AAGCCGCCATTGAAGTGCAACCGCTGAAACAGATGAACGGCCATGCCTCG TTCAACCAGGTGTTTTTCAGTGACGCCAGAATTCCGGCTGACAACCTGGT CGGCAAGATAGGCGACGGCTGGAAGATTGCCATGACCACCCTCGCCCATG AGCGACGCAACGCCGATGCGCTGCGTCGCTGGGGCCACGCCTCGCCCCAT GTCGGCCCGATATACGAGCAGGAGCGCGACGAAATCGCGACCGTCATGGA GCCTTACAAGTGGTATCCGCAACGCGCCGGGCGTGTCGATCTGGTGCTGC CGCGCGCCCATGACACCGGCCGCAAGGTCTCGGGCAAAGCTGAAGGCCCG GAAGGCTCTCTGGGCAAACTGGCGGCGAGCCATGTCGCGCGCGCCGCTGC CCATGTCCACACGCAGATCAGCGGCGCCGAGGCGATGCTGGCCGGCAGCG ACAGTCCGCACGATGGTCTCATCGCCGAGATCCTGCTGTCAGTACCCGCC ACTTCGATCGCCGGCGGCACCGATGAGATCCAGCGCAACATCATCGGTGA GCGGGTCCTGGATCTGCCGCGCGAGCCGCGCATGGATGGCGGACCATTCC GCGATGTACCGAGAAATCCGCAGCGCGGGCGTTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig13038:419..1603+

>mRNA_P-wetherbeei_contig13038.1.1 ID=mRNA_P-wetherbeei_contig13038.1.1|Name=mRNA_P-wetherbeei_contig13038.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1170bp|location=Sequence derived from alignment at P-wetherbeei_contig13038:419..1603+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTGCCCATGACGAAGCCTCGGTGCGCAGCGAAGTGCGTGCCTGGTT
GCAGCAACACTGGGACATCCAACGCAGTCTCGTGGCGTGGCGTAATCTGC
TCGCCGACAGCGGCTGGGGCATGCCCCATTGGCCGCGCGCGTGGTATGGC
CGCGATCTGCCGGTCGCCCTGCTGCCGATAGTGGAAGAAGAATTCGAAGC
CTGTGGCGCGGTCGGCGTGGCGCGCATCGGCATCCGCCTGCTGGCGGCAG
CAACCCTGCTCGAACATGGCTCGGACTCGCACAAGTCGCGCTTCCTGCGC
CGCATCCTGACCGGCGAAGACAGTTGGTGTCAGTTGTTCAGCGAACCGGG
CAGTGGTTCCGACCTGGCCGGTGCGACCACTCGCGCGGACCAGGATGGTG
AGGGCTGGGTGGTGAACGGGCAAAAGCTGTGGACCACCAGTGCCCATCAT
GCGGAGTGGGGCTTGCTGCTCGCGCGCACCGACTGGGACGCGCCGAAACA
TACCGGCATGTCTTACTTCATCATCGACATGCGGCAAGCCGCCATTGAAG
TGCAACCGCTGAAACAGATGAACGGCCATGCCTCGTTCAACCAGGTGTTT
TTCAGTGACGCCAGAATTCCGGCTGACAACCTGGTCGGCAAGATAGGCGA
CGGCTGGAAGATTGCCATGACCACCCTCGCCCATGAGCGACGCAACGCCG
ATGCGCTGCGTCGCTGGGGCCACGCCTCGCCCCATGTCGGCCCGATATAC
GAGCAGGAGCGCGACGAAATCGCGACCGTCATGGAGCCTTACAAGTGGTA
TCCGCAACGCGCCGGGCGTGTCGATCTGGTGCTGCCGCGCGCCCATGACA
CCGGCCGCAAGGTCTCGGGCAAAGCTGAAGGCCCGGAAGGCTCTCTGGGC
AAACTGGCGGCGAGCCATGTCGCGCGCGCCGCTGCCCATGTCCACACGCA
GATCAGCGGCGCCGAGGCGATGCTGGCCGGCAGCGACAGTCCGCACGATG
GTCTCATCGCCGAGATCCTGCTGTCAGTACCCGCCACTTCGATCGCCGGC
GGCACCGATGAGATCCAGCGCAACATCATCGGTGAGCGGGTCCTGGATCT
GCCGCGCGAGCCGCGCATGGATGGCGGACCATTCCGCGATGTACCGAGAA
ATCCGCAGCGCGGGCGTTAG
back to top