mRNA_P-wetherbeei_contig13035.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13035.1.1
Unique NamemRNA_P-wetherbeei_contig13035.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: A0A7X1P1D0_9PROT (MmgE/PrpD family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P1D0_9PROT)

HSP 1 Score: 525 bits (1352), Expect = 2.270e-181
Identity = 264/448 (58.93%), Postives = 331/448 (73.88%), Query Frame = 1
Query:   31 DSTTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGGHPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWKLPAPGDARMVTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREVHVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDLCGPRIAAGAREELLRRLWNFERVGDIDTEILRMLA 1374
            D TT +LV+FAL ++Y AL    VH CK+RLIDT  CALGA+DEP SAMAR++A R  G P+A +WGS   STPE AAFANG MLR +DISDTY+G   GHPSD+ A ++A A+   ADG +VI A   AYD+YC+L DA D   +GWDQ +Y VL  V+G GKL+ L REQ  NA++LAL PNMA+ QTR+G LSSWKGCAGANAARNAVFAA+LA++GFTGP+ +FEG+ GL+++ G+FEW LP PG   MV +T++K+LPVCYHGQSAVL AL+++ R+ V  ++E+ VEAYR AV  MG +PSRWAPTT ETADHS+PYTIAIA LDGAVT  S+E  RFT+P VV LM+KVKV ED  LTA YP+ +P R+T+ + SGEV T EMRYP GH K+A+ D  +  KF  +   R   GA  E+L RLW  E+  D+  E++  LA
Sbjct:   53 DRTTAQLVDFALQSQYAALSPQAVHECKRRLIDTLGCALGAFDEPLSAMARAVASRSQGDPSARIWGSRAASTPENAAFANGVMLRLMDISDTYLGKARGHPSDVTAAVLAAADIAHADGRAVIAANAAAYDIYCSLCDAHDWNARGWDQPVYAVLAAVVGAGKLLDLEREQFANAIALALVPNMAMTQTRRGPLSSWKGCAGANAARNAVFAALLARDGFTGPTAIFEGEGGLFDIAGQFEWHLPDPGC--MVGRTHIKTLPVCYHGQSAVLLALDMRKRLPVERVKEIRVEAYRTAVDMMGNDPSRWAPTTHETADHSLPYTIAIAFLDGAVTESSFERARFTDPQVVALMQKVKVDEDPALTALYPDGAPGRLTVVMDSGEVETAEMRYPTGHAKSAITDAEVEEKFCGMLEKRNMRGACSEVLGRLWQLEQARDVGAEVVDRLA 498          
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: A0A7C2YEF6_9PROT (MmgE/PrpD family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YEF6_9PROT)

HSP 1 Score: 476 bits (1226), Expect = 6.530e-163
Identity = 242/442 (54.75%), Postives = 308/442 (69.68%), Query Frame = 1
Query:   22 KHTDSTTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGGHPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWKLPAPGDARMVTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREVHVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDLCGPRIAAGAREELLRRLWNFERVGDI 1347
            K  D TT RLVEF+    +  L A T H  K+ LIDTFA ALGA DEP   M+R+LA R      A +WGSD  ++ E AAFANG M+R LD+SDTY+G   GHPSDM++G+IA AE  RADG ++I A+++AYDVYC+  + VD+  +GWDQ +YGVLG  LG  KL+RLS +   +AVSLAL PN+AL Q R+G LSSWKGCAGANA+RNA+FA +LA+ GFTGP   FEG  GLW+ +GR EW LP   D  +++ T++K LPVCYHGQS+V  AL+L+ + +VA I E+ VE Y   V  MG +PSRWAP TRETADHS+PY +A+ALLDGAVT  S+ P R   P V  LMRKVKV ED  LT  YPES+P RVT+ + SG+ +  E+RYP GHVKN + D  I AKF D+   R++A  R+  L+ +W  E + D+
Sbjct:    6 KSWDETTRRLVEFSRRTRFEDLGARTHHEAKRHLIDTFAAALGACDEPVCVMSRALAARYRADGEARIWGSDTSASAEMAAFANGVMVRALDVSDTYLGRSRGHPSDMISGLIAAAELARADGRTLIEAISLAYDVYCSFCEHVDLNAQGWDQPVYGVLGCALGAAKLLRLSADATAHAVSLALVPNVALAQARRGALSSWKGCAGANASRNALFAVMLARAGFTGPFAPFEGSGGLWDAIGRAEWPLP---DEPLISSTHMKCLPVCYHGQSSVEAALQLRAQANVADIEEIRVETYGAGVFMMGSDPSRWAPETRETADHSLPYCVAVALLDGAVTEASFAPPRLHAPEVKTLMRKVKVAEDRALTDLYPESAPGRVTLVMRSGQRHVAEIRYPRGHVKNPLSDARIEAKFADMSDGRLSAAQRDAALQAIWRLEALADV 444          
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: A0A370NLM3_9BURK (Uncharacterized protein n=1 Tax=Cupriavidus lacunae TaxID=2666307 RepID=A0A370NLM3_9BURK)

HSP 1 Score: 439 bits (1130), Expect = 2.100e-148
Identity = 225/451 (49.89%), Postives = 303/451 (67.18%), Query Frame = 1
Query:   31 DSTTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGG-HPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWK-LPAPGDARMVTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREVHVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDLCGPRIAAGAREELLRRLWNFERVGDIDTEILRMLAV 1377
            DS T +LVE A    Y  L   TVH CK+RLIDT ACA+G++D P S   R LA    GTP A +WG+  ++TPE AAF NG MLR  + SDTY+G GGG HPSDM++G++A A+A  A+G +++ A+ + YDVYC L DA ++G KG+DQ ++ VLGTVLGVGKL  L+  QM +AV+LA+ PNMALRQTR G+LS WKGCAGANA RNA+FAA LA+ G  GP+ +F+GKQGL +V G F W  L      RM+T+T++K LPVCYH QSA L ALEL  ++++  + ++HVE Y+ AV    G+  +W P T E+ADHS+P+ +A AL  G V    +       P V+ LM KV+VTED  L+  +PES+ +RVT+  +SG   + E+ YP GH++N M D  I AKF  L GPR  AGA +  L+ LW  +   D++T++L  L++
Sbjct:    2 DSLTQQLVELAHDTRYHTLGTETVHECKRRLIDTIACAMGSFDHPLSVSMRELASHYHGTPGAGIWGTTSRTTPEMAAFVNGVMLRVGENSDTYIGKGGGGHPSDMISGMVAAADACGANGRALVEAVVIGYDVYCRLMDASNLGEKGFDQVVHVVLGTVLGVGKLFGLTAVQMHHAVALAIAPNMALRQTRHGQLSHWKGCAGANAVRNAIFAAALAKRGVEGPASIFDGKQGLCSVTGNFAWPALEEFRSHRMITRTSIKPLPVCYHTQSAALAALELHTKLNLGEVDDIHVETYKTAVDMAAGDAGQWTPRTPESADHSLPFVVATALERGRVEPNCFHADELCHPGVLRLMAKVRVTEDQALSRLWPESAAARVTVRGASGREVSSEVLYPKGHIRNPMSDAEISAKFVALFGPRSGAGACDRALKALWEIDESDDLNTDLLVPLSL 452          
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: UPI00131C741D (MmgE/PrpD family protein n=1 Tax=Acidisphaera sp. S103 TaxID=1747223 RepID=UPI00131C741D)

HSP 1 Score: 437 bits (1124), Expect = 1.490e-147
Identity = 222/433 (51.27%), Postives = 291/433 (67.21%), Query Frame = 1
Query:   31 DSTTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGGHPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWKLPAPG--DARMVTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREVHVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDLCGPRIAAGAREELLRRLW 1323
            D TTT L ++A    Y AL    VHACK+RL+D+ ACALGA D P     R+LARR  G P A+VWGS  +S+PE AAFANG  +R+LD SDTY+    GHPSD++AGI+A+A+AVRA G  VINA+ +AY++YC   D V   TKG DQ    V+      G+L+ LSR+ + NA++LAL PN+ L   R GELS WKGCAG N A+  VFAA LAQ+GFTGPS VF+G  GLW++LG  EW+L  PG    R + Q+++K+ PVCYHG SAV  A+ L+ R+  + +R + +E Y  AV +M G+P+RWAP TRETADHS+PY +++ALLDGA+T  SY P R  +PAV  LM KVKV E +  +A YP+ +P+RVT+ L+SG+  T E+R+P GH  N + D  + AKF  L  P +   A   LL  LW
Sbjct:    2 DRTTTHLADYAAATAYAALPPSAVHACKRRLVDSMACALGALDAPLCHRVRALARRHAGDPDAAVWGSPARSSPEIAAFANGVAVRYLDHSDTYVSKSPGHPSDVIAGILAIADAVRAPGTEVINAIVLAYEIYCGFLDVVAAHTKGIDQATAVVIAVAAAGGRLLGLSRDAIANAIALALVPNLHLSNVRHGELSDWKGCAGPNGAKAGVFAAYLAQDGFTGPSGVFDGPGGLWSILGPVEWRLDDPGAHQPRKIEQSDIKTFPVCYHGLSAVEAAIGLRDRISPSELRSIEIETYGLAVLRMAGDPTRWAPKTRETADHSLPYVVSVALLDGALTSASYNPARLNDPAVAALMAKVKVGETSGHSAGYPDGAPARVTVGLASGQSVTAEIRFPKGHQNNPVSDAELEAKFFSLAAPTVNRTAARRLLDGLW 434          
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: W0PB65_ADVMD (Putative 2-methylcitrate dehydratase PrpD n=1 Tax=Advenella mimigardefordensis (strain DSM 17166 / LMG 22922 / DPN7) TaxID=1247726 RepID=W0PB65_ADVMD)

HSP 1 Score: 424 bits (1090), Expect = 2.360e-142
Identity = 217/447 (48.55%), Postives = 299/447 (66.89%), Query Frame = 1
Query:   40 TTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGG-HPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWKLPAPGDA-RMVTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREVHVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDLCGPRIAAGAREELLRRLWNFERVGDIDTEILRMLA 1374
            T +L+E A    Y  L A TVH CK+R+ID+ ACA+ +++ P S   R+LA    G P A++WG+ +++TPE AAFANG M+R  + SDT++G GGG HPSDM+AG+IAVAEA +A G ++I A+ +AYDVYC L DAVD+  KGWDQ  +  LGTVLG  +L+ L   QM  A+SLA+ PNMALRQTR GELS WKGCAGANAARNAVFAA LAQ G  GPS +F+GKQGLW+V G+FEW +   GD+ RMV +T++K LPVCYH QSA L AL+L P++    I +VHV  YR A+        +WAP T E+ADHS+P+ +A ALL GA+   S++  R   P V  +M  ++V+ED  L++ +P+S+ +RVT+   +G   + E+ YP GHV N M D  +  K ++           ++++  LW  ++ G + + I ++LA
Sbjct:    5 TKQLIELAQNTRYERLGAETVHECKRRIIDSIACAMASFNHPLSISMRTLASSYRGAPDAALWGTGVRTTPEMAAFANGVMVRVGENSDTFIGKGGGGHPSDMIAGLIAVAEAAQASGQALIEAIVIAYDVYCGLMDAVDLAAKGWDQAFHVTLGTVLGASRLLGLDESQMEQAISLAICPNMALRQTRHGELSHWKGCAGANAARNAVFAATLAQRGVIGPSGIFDGKQGLWSVTGQFEWPVLYHGDSLRMVARTSIKPLPVCYHTQSAALAALKLFPKLAKDTISQVHVHTYRTALEMAADGAHQWAPQTSESADHSLPFVVATALLHGAIAPSSFQADRLACPDVRKVMSTIQVSEDPALSSLWPKSAAARVTVETRNGVQLSEEILYPKGHVNNPMSDDEVATKLYEGVSALAGQDKGKKIVTTLWGIDQNGVLASAIGQVLA 451          
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: A0A2E6QB62_9PROT (2-methylcitrate dehydratase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QB62_9PROT)

HSP 1 Score: 395 bits (1016), Expect = 3.960e-131
Identity = 204/440 (46.36%), Postives = 277/440 (62.95%), Query Frame = 1
Query:   31 DSTTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGGHPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWKLPAPGDARMVTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREVHVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDLCGPRIAAGAREELLRRLWNFERVGDID 1350
            D+TT RLV++ALG  Y  +    V   K RL+DT  C  GA++ P S  AR LA R +    A+V     +  PE AAFAN  MLR LD+SD Y    GGHPSD++  + A AE    DG S+I  + +AY+VYC+  ++ D  + GWDQ +YGV+ + LG GKL+ L REQ+G+ V+L+L PNMA+ QTRQGELS+WKGCAG NAARN +FAA+LAQEGFTGP Q  +GK G    +G F+W L        + +T LK+ P+CY GQ+AV  ALE++ ++ VA I +VH++ Y  + T MG +PSRWAP TRETADHSMPY IA ALLDG VT  S+      +PA + LM+K+ V  D  +T  +P   P R+T+TL  G+  T E+ +P GH ++ M D  +  KF +L     A    E ++  + N + + DI+
Sbjct:    2 DATTERLVDYALGVNYEDIAPEIVAGTKTRLLDTLGCIAGAWEHPVSTDARRLAARTSMDTPATVIADGNQVAPEMAAFANSVMLRVLDVSDAYRVKCGGHPSDIMGAVFAAAELGARDGKSLIVGLALAYEVYCSFTESHDANSLGWDQPVYGVVASALGAGKLLGLDREQLGHTVALSLVPNMAMYQTRQGELSAWKGCAGGNAARNGLFAALLAQEGFTGPEQPIDGKFGFKEFVGEFDWALEPGKPPYRIGKTYLKAFPICYQGQTAVWAALEMRDQIAVADIEKVHIDTYLKSFTMMGSDPSRWAPKTRETADHSMPYVIAKALLDGGVTEASFSDDALRDPATLALMQKITVAADDAMTEVHPGKVPGRITVTLKDGKEVTHELPFPKGHSQSPMSDDEVKTKFRELYSVYGAPAGAEAVIDVVENLDALDDIE 441          
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: A0A2E7RAB4_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7RAB4_9PROT)

HSP 1 Score: 388 bits (997), Expect = 2.400e-128
Identity = 195/414 (47.10%), Postives = 267/414 (64.49%), Query Frame = 1
Query:   31 DSTTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGGHPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWKLPAPGDARM-VTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREVHVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDL 1269
            D+TT  L ++AL   Y  + A  +   K R++DT  C  GA D P S     +ARR +    A+++ +  K++PE AAFAN  MLR LD+SD+Y    GGHPSD+L    A AE   A G  +I A+ + Y+VYC+  + +D+ TKGWDQ +YG++ + +  GKL+RL  EQ+ +A++LAL PNMA  QTR+GELS+WKGCAGANAARN +FAA+LA EGFTGP +  EGK GLW+V+G+F+W L  PG+A   +  TNLK+ P+CY GQ+AV  AL ++ R  V AI+ +HV+ Y  A T MG +P+RWAP TRETADHSMPY +  A L G V   ++  +    P +  LM ++ V ED  LT  +PE  P R+T+TL+ G  +  E+ YP GH K+ M    +  KFH L
Sbjct:    2 DATTENLAKYALSVNYDEISADVIAGAKLRILDTLGCIAGAIDHPVSKSVCRMARRYSMETPATIFATGEKTSPEMAAFANSVMLRVLDLSDSYRVKSGGHPSDLLGASFAAAEIADATGKELIAAIALGYEVYCSFTETIDVNTKGWDQPIYGIVASAVSAGKLLRLDCEQLTHAIALALVPNMATFQTREGELSAWKGCAGANAARNGLFAALLAMEGFTGPEKPVEGKYGLWDVIGKFQWPLQ-PGEAPYRIAITNLKAFPICYQGQTAVWTALGMRDRFSVDAIKNIHVDTYLKAFTMMGSDPNRWAPRTRETADHSMPYVVGTAFLYGDVGEAAFTDEALQSPNIKALMPRITVAEDPALTEAHPEQVPCRMTVTLNDGSKHVHELPYPKGHAKHPMSADEVTNKFHRL 414          
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: UPI001CAF153D (MmgE/PrpD family protein n=1 Tax=Paraburkholderia unamae TaxID=219649 RepID=UPI001CAF153D)

HSP 1 Score: 381 bits (979), Expect = 1.130e-125
Identity = 198/435 (45.52%), Postives = 269/435 (61.84%), Query Frame = 1
Query:   37 TTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGGHPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWKLPAPGDARMVTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREVHVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDLCGPRIAAGAREELLRRLWNFERVG 1341
            T  RL +FA   +  +L A  + ACK+RLID+ ACA  AY EP     R  A R +  PAA +WGS   ++ E AAFANGTM+R+LD SDT++G   GHPSDM+AG++AVAEA    GAS+ +A+ VAY+VYC L D V + +   DQ     LGT  G G+L+ LS+ Q  +A+SLAL PN+ L   R G LS WKGCAG N  RN +FAA+LA+EG +GP+ + EG  GL++++  F+W + A      +T T+LK  PVCYHGQ+A+  A+EL  RV +  IRE+HVE Y  A   M  +  RWAP+TRETADHS+PYTIA+AL +G +   +Y+ +R  EP    LM  ++V+    +T Q+P   P+R++I    GE Y +    P GH KN + D  + +KF DL      A A    L  LW  +R+ 
Sbjct:    4 TVARLAKFAHETDIDSLPATAIEACKRRLIDSVACAAAAYQEPFCERIRGFAMRYSAVPAARIWGSGATTSTELAAFANGTMVRYLDYSDTFLGKSAGHPSDMIAGLVAVAEAHGQSGASLTSAIIVAYEVYCGLCDGVALSSVAVDQATCAALGTAAGAGRLLGLSQAQFEHAISLALAPNLHLYNVRSGTLSDWKGCAGPNGTRNGIFAALLAREGVSGPASIVEGAGGLFDIVDPFDWIVDAA--TPWITSTHLKFHPVCYHGQTAIDAAIELHKRVSIQRIREIHVETYDAAYRAMANDVHRWAPSTRETADHSLPYTIAVALHEGKLVPSAYKTERLAEPRTKQLMDLIRVSSSDAMTGQFPARVPTRISIRAEGGETYCQLQELPRGHAKNPLSDAELESKFIDLYATWGDASAARRTLDTLWQVDRLA 436          
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: A0A2E6Q8Z2_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6Q8Z2_9PROT)

HSP 1 Score: 379 bits (972), Expect = 2.790e-124
Identity = 190/444 (42.79%), Postives = 274/444 (61.71%), Query Frame = 1
Query:   31 DSTTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGGHPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWKLPAPGDARMVTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREVHVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDLC---GPRIAAGAREELLRRLWNFERVGDIDT 1353
            D TT RLV++ L   +  L  P + ACK RL+DT  C  G Y+ P +   R+ A R      A++ G+   +TP+ AAFANG  LR LD++D Y    GGHPSD+L  + A AE    DG S + AM + Y++YC++ DA DI  KGWDQ ++GV+ + L  G+LM L REQ+G+A+++AL PNMA+ QTR+G+LS+WKGCA ANAARN +FAA+LA+EGFTGP Q  EG  G W+++G FEW L +      +  +++K+ P+C HGQ+AV  AL L+ ++    I  V +E Y  A   MG + SRWAPTTRETADHS+PY +A ALL+G +   ++ P    +  +  LM+K+ VT   ++T+++P   P R+TITL  G  +  ++ +  GH  N M +  +  KF +L    G    A    +++RR    E V ++ T
Sbjct:   24 DPTTERLVDYTLATRFEDLSEPVIIACKDRLLDTLGCIAGGYNHPVAIATRNFAGRYRMDRPATIIGNGCAATPDIAAFANGVGLRILDMNDNYRVKSGGHPSDILGALFAGAELGTCDGRSFLTAMAIGYEIYCSICDATDINGKGWDQPVFGVVASALTAGRLMGLGREQLGHALAMALVPNMAMIQTRKGQLSAWKGCAAANAARNGLFAALLAEEGFTGPEQPIEGTHGFWDIVGEFEWPLQSGEPPERIRGSDMKAFPICVHGQTAVWVALGLREKLQTEKIASVRIETYHRAFEMMGQDESRWAPTTRETADHSLPYVVAAALLNGPIDETAFAPDALKDGKLSGLMQKITVTATEEMTSRHPAGMPCRLTITLDDGSEFAHQLDFQKGHPSNPMSEAELSTKFKNLFATYGNEDQADEVIDIVRRFEEAEAVAELIT 467          
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Match: A0A370NLR8_9BURK (MmgE/PrpD family protein n=1 Tax=Cupriavidus lacunae TaxID=2666307 RepID=A0A370NLR8_9BURK)

HSP 1 Score: 377 bits (968), Expect = 6.910e-124
Identity = 198/445 (44.49%), Postives = 277/445 (62.25%), Query Frame = 1
Query:   31 DSTTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALGAYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDISDTYMGLGGGHPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDAVDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQTRQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGRFEWKLPAPGDARMVTQTNLKSLPVCYHGQSAVLCALELQPRV---DVAAIREVH---VEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYEPQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREMRYPMGHVKNAMDDQAIGAKFHDLCGPRIAAGAREELLRRLWNFERVGDI 1347
            D+TT R+      AE+R L    +H C++R+ID+ ACA  AY EP  A  R+ A R  GTPAA +WGS  +++ E AAFANGTMLR+ D SDT++G   GHPSDM+ G++A+AEA    G  ++ A+ VAY+VYC+L D+  + ++G DQ      G+  G  +L+ L   Q G A+SLAL+ ++ L   R G+LS WKGCAG N ARN VFAA+LA+EG TGPS V EGK GL +V G  +W++ A G+  ++  T+LK  PVCYHGQ+AV  AL L+ R+   D+ AI  +    V+ Y  A+  MGG+P+RWAPT RETADHS+PYTIA+ALL+G +    YE +R  +P  + LM +++V   A+LT  +P  S SR+ I L  G  Y+     P G   N + D  + +KF +L  P     A    L  LW+ +++  +
Sbjct:    2 DATTLRIARHVAAAEFRRLPEQAIHECRRRIIDSVACAAAAYREPFCATIRTFAARYAGTPAARMWGSGERTSIEMAAFANGTMLRYQDYSDTHLGKSNGHPSDMIGGLVALAEAFHLGGEDLVTAIVVAYEVYCSLCDSTALASRGIDQGTCAAAGSAAGAARLLGLGETQAGEAISLALSSSLQLYNVRTGDLSDWKGCAGPNGARNGVFAALLAREGVTGPSAVVEGKGGLRDVAGELDWRVGA-GEMPLIVGTHLKFHPVCYHGQAAVDAALTLRDRISGEDIVAIESIEAIEVQTYEAALRAMGGDPTRWAPTNRETADHSLPYTIAVALLNGRLVSADYERERLADPRTLRLMERIRVGCSAELTNAFPAHSRSRIAIRLKDGTTYSHLQNDPKGSAANPLTDAELESKFLELYRPWSDGPAARRTLDLLWSVDQLASV 445          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13035.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X1P1D0_9PROT2.270e-18158.93MmgE/PrpD family protein n=1 Tax=Betaproteobacteri... [more]
A0A7C2YEF6_9PROT6.530e-16354.75MmgE/PrpD family protein n=1 Tax=Betaproteobacteri... [more]
A0A370NLM3_9BURK2.100e-14849.89Uncharacterized protein n=1 Tax=Cupriavidus lacuna... [more]
UPI00131C741D1.490e-14751.27MmgE/PrpD family protein n=1 Tax=Acidisphaera sp. ... [more]
W0PB65_ADVMD2.360e-14248.55Putative 2-methylcitrate dehydratase PrpD n=1 Tax=... [more]
A0A2E6QB62_9PROT3.960e-13146.362-methylcitrate dehydratase n=1 Tax=Rhodospirillac... [more]
A0A2E7RAB4_9PROT2.400e-12847.10Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
UPI001CAF153D1.130e-12545.52MmgE/PrpD family protein n=1 Tax=Paraburkholderia ... [more]
A0A2E6Q8Z2_9PROT2.790e-12442.79Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A370NLR8_9BURK6.910e-12444.49MmgE/PrpD family protein n=1 Tax=Cupriavidus lacun... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13035contigP-wetherbeei_contig13035:370..1749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1247726.MIM_c20300
PFAMsMmgE_PrpD
Model size1380
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC01152
KEGG koko:K01720
KEGG ReactionR04424
KEGG Pathwayko00640,map00640
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.87e-143
EggNOG OGsCOG2079@1|root,COG2079@2|Bacteria,1MUIG@1224|Proteobacteria,2VZAZ@28216|Betaproteobacteria
EC4.2.1.79
DescriptionMmgE/PrpD family
Cds size1380
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185971.7559054-CDS-P-wetherbeei_contig13035:369..17491683185971.7559054-CDS-P-wetherbeei_contig13035:369..1749Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13035 370..1749 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13035.1.1prot_P-wetherbeei_contig13035.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13035 370..1749 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13035.1.1

>prot_P-wetherbeei_contig13035.1.1 ID=prot_P-wetherbeei_contig13035.1.1|Name=mRNA_P-wetherbeei_contig13035.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=460bp
MDTISSDKHTDSTTTRLVEFALGAEYRALDAPTVHACKQRLIDTFACALG
AYDEPPSAMARSLARRCTGTPAASVWGSDIKSTPEAAAFANGTMLRFLDI
SDTYMGLGGGHPSDMLAGIIAVAEAVRADGASVINAMTVAYDVYCTLNDA
VDIGTKGWDQTLYGVLGTVLGVGKLMRLSREQMGNAVSLALTPNMALRQT
RQGELSSWKGCAGANAARNAVFAAVLAQEGFTGPSQVFEGKQGLWNVLGR
FEWKLPAPGDARMVTQTNLKSLPVCYHGQSAVLCALELQPRVDVAAIREV
HVEAYRGAVTQMGGEPSRWAPTTRETADHSMPYTIAIALLDGAVTVRSYE
PQRFTEPAVVDLMRKVKVTEDAKLTAQYPESSPSRVTITLSSGEVYTREM
RYPMGHVKNAMDDQAIGAKFHDLCGPRIAAGAREELLRRLWNFERVGDID
TEILRMLAV*
back to top

mRNA from alignment at P-wetherbeei_contig13035:370..1749-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13035.1.1 ID=mRNA_P-wetherbeei_contig13035.1.1|Name=mRNA_P-wetherbeei_contig13035.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1380bp|location=Sequence derived from alignment at P-wetherbeei_contig13035:370..1749- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACACCATCTCATCAGACAAGCACACGGACTCGACCACCACGCGGCT GGTTGAGTTCGCGCTTGGCGCGGAATATCGGGCGCTCGACGCGCCAACGG TGCACGCCTGCAAGCAGCGCTTGATAGACACGTTTGCCTGCGCGCTGGGC GCGTACGACGAGCCGCCCAGCGCAATGGCGCGTTCGCTCGCCCGTCGCTG CACGGGAACGCCCGCGGCGAGCGTGTGGGGCAGCGACATCAAGTCCACGC CGGAAGCCGCCGCTTTCGCGAATGGCACGATGTTGAGGTTTCTCGACATC AGCGATACCTATATGGGGCTGGGCGGCGGACATCCGAGCGATATGCTCGC GGGTATCATCGCGGTTGCGGAAGCGGTCCGCGCAGACGGAGCATCCGTGA TCAACGCAATGACCGTTGCCTACGACGTTTACTGCACCCTTAACGACGCG GTCGATATCGGCACCAAGGGCTGGGACCAGACGCTATATGGCGTACTCGG TACGGTGCTCGGCGTCGGTAAACTGATGCGCTTGTCGCGGGAGCAGATGG GGAACGCGGTATCGCTCGCGCTTACGCCGAATATGGCGTTGCGGCAAACG CGGCAAGGCGAACTTTCGAGCTGGAAGGGCTGCGCCGGCGCGAATGCGGC GCGTAACGCGGTTTTCGCGGCAGTGCTCGCACAGGAAGGGTTTACCGGTC CGTCGCAGGTATTCGAAGGCAAGCAGGGGTTGTGGAATGTGCTCGGCCGT TTCGAGTGGAAGCTGCCGGCGCCCGGCGACGCGCGCATGGTGACGCAAAC GAATTTGAAAAGCCTGCCGGTCTGCTACCACGGACAATCTGCCGTGTTGT GCGCGCTGGAACTGCAGCCGCGCGTCGATGTCGCCGCCATCCGCGAAGTC CACGTCGAGGCTTACCGCGGGGCCGTGACGCAGATGGGCGGCGAACCCAG CCGGTGGGCGCCGACCACGCGGGAAACCGCCGACCACAGCATGCCGTACA CGATTGCAATCGCATTGCTGGACGGCGCGGTAACAGTGCGGTCCTACGAG CCGCAGCGCTTCACCGAACCGGCAGTCGTCGATTTGATGCGCAAAGTGAA AGTCACGGAAGATGCGAAACTGACGGCGCAGTACCCGGAATCGTCGCCCA GCCGCGTGACGATCACACTGTCGTCCGGCGAGGTGTATACCAGAGAGATG CGCTACCCGATGGGGCACGTCAAAAATGCCATGGATGACCAGGCGATCGG GGCGAAGTTTCACGACCTGTGCGGGCCGCGAATCGCCGCGGGAGCGCGCG AGGAATTGCTGCGCAGGCTGTGGAATTTCGAGCGCGTTGGAGATATAGAC ACGGAAATCCTCCGGATGCTGGCAGTTTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig13035:370..1749-

>mRNA_P-wetherbeei_contig13035.1.1 ID=mRNA_P-wetherbeei_contig13035.1.1|Name=mRNA_P-wetherbeei_contig13035.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1380bp|location=Sequence derived from alignment at P-wetherbeei_contig13035:370..1749- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACACCATCTCATCAGACAAGCACACGGACTCGACCACCACGCGGCT
GGTTGAGTTCGCGCTTGGCGCGGAATATCGGGCGCTCGACGCGCCAACGG
TGCACGCCTGCAAGCAGCGCTTGATAGACACGTTTGCCTGCGCGCTGGGC
GCGTACGACGAGCCGCCCAGCGCAATGGCGCGTTCGCTCGCCCGTCGCTG
CACGGGAACGCCCGCGGCGAGCGTGTGGGGCAGCGACATCAAGTCCACGC
CGGAAGCCGCCGCTTTCGCGAATGGCACGATGTTGAGGTTTCTCGACATC
AGCGATACCTATATGGGGCTGGGCGGCGGACATCCGAGCGATATGCTCGC
GGGTATCATCGCGGTTGCGGAAGCGGTCCGCGCAGACGGAGCATCCGTGA
TCAACGCAATGACCGTTGCCTACGACGTTTACTGCACCCTTAACGACGCG
GTCGATATCGGCACCAAGGGCTGGGACCAGACGCTATATGGCGTACTCGG
TACGGTGCTCGGCGTCGGTAAACTGATGCGCTTGTCGCGGGAGCAGATGG
GGAACGCGGTATCGCTCGCGCTTACGCCGAATATGGCGTTGCGGCAAACG
CGGCAAGGCGAACTTTCGAGCTGGAAGGGCTGCGCCGGCGCGAATGCGGC
GCGTAACGCGGTTTTCGCGGCAGTGCTCGCACAGGAAGGGTTTACCGGTC
CGTCGCAGGTATTCGAAGGCAAGCAGGGGTTGTGGAATGTGCTCGGCCGT
TTCGAGTGGAAGCTGCCGGCGCCCGGCGACGCGCGCATGGTGACGCAAAC
GAATTTGAAAAGCCTGCCGGTCTGCTACCACGGACAATCTGCCGTGTTGT
GCGCGCTGGAACTGCAGCCGCGCGTCGATGTCGCCGCCATCCGCGAAGTC
CACGTCGAGGCTTACCGCGGGGCCGTGACGCAGATGGGCGGCGAACCCAG
CCGGTGGGCGCCGACCACGCGGGAAACCGCCGACCACAGCATGCCGTACA
CGATTGCAATCGCATTGCTGGACGGCGCGGTAACAGTGCGGTCCTACGAG
CCGCAGCGCTTCACCGAACCGGCAGTCGTCGATTTGATGCGCAAAGTGAA
AGTCACGGAAGATGCGAAACTGACGGCGCAGTACCCGGAATCGTCGCCCA
GCCGCGTGACGATCACACTGTCGTCCGGCGAGGTGTATACCAGAGAGATG
CGCTACCCGATGGGGCACGTCAAAAATGCCATGGATGACCAGGCGATCGG
GGCGAAGTTTCACGACCTGTGCGGGCCGCGAATCGCCGCGGGAGCGCGCG
AGGAATTGCTGCGCAGGCTGTGGAATTTCGAGCGCGTTGGAGATATAGAC
ACGGAAATCCTCCGGATGCTGGCAGTTTGA
back to top