mRNA_P-wetherbeei_contig13033.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13033.1.1
Unique NamemRNA_P-wetherbeei_contig13033.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: A0A835ZIU8_9STRA (Acetylornithine deacetylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIU8_9STRA)

HSP 1 Score: 227 bits (579), Expect = 4.310e-70
Identity = 113/159 (71.07%), Postives = 133/159 (83.65%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALPTRGSFSRYELPDEGVKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQILARVVKGVEA 477
            QIP HAT+ GDCRVTPFY VA VRAA+E YVAD+N +  LA LPTRG  S+YELPD   KG++ELTW+FDGE+GIAC L S G++AL+ ATR+V G A PYSISGSLPLVRWMQDNG+DVQICGYGLSS+YHAENECCSL  M++AT+ILA V+  +EA
Sbjct:  292 QIPPHATIMGDCRVTPFYKVADVRAAIEAYVADLNNN--LAQLPTRGPCSKYELPDR--KGRIELTWIFDGEDGIACSLDSEGNAALVGATRDVTGDAQPYSISGSLPLVRWMQDNGFDVQICGYGLSSRYHAENECCSLSKMKEATRILAAVIARLEA 446          
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: A0A6H5JGN0_9PHAE (M20_dimer domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGN0_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.320e-58
Identity = 103/158 (65.19%), Postives = 122/158 (77.22%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALPTRGSFSRYELPDEGVKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQILARVVKGVE 474
            QIP HATVSGDCRVTPFY V  V+ ++E YVA++N    +  LP+RG+FS+Y LP EG +G +ELTWV  GE+GIAC+L S G  AL AAT  V+G +APYSISGSLPLVRW+QD GYDVQICGYGLSS+YHAENE CSL AM  A +ILA  V  +E
Sbjct:  349 QIPPHATVSGDCRVTPFYGVDKVQESIEKYVAEINADPSI--LPSRGAFSKYVLPAEGRQGTIELTWVTKGEDGIACNLESEGADALNAATATVIGQSAPYSISGSLPLVRWLQDQGYDVQICGYGLSSRYHAENEYCSLAAMGNAVKILAGTVARLE 504          
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: A0A4D9D205_9STRA (M20_dimer domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D205_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.680e-48
Identity = 89/160 (55.62%), Postives = 116/160 (72.50%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALPTRGSFSRYELPDEG--VKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQILARVVKGVE 474
            Q+P HAT SGD R  PFY++  V+A +E YVAD+N +  + +LP+ G FS Y +  E   ++GKLEL W+ +GENGIA  LG+ G+ AL  AT+EVLG   PYSI+GSLPLVR++QDN +DVQ+ GYG S+KYHAENE   L+  RQA +ILARVV  +E
Sbjct:  286 QVPPHATFSGDIRSVPFYEIKDVKAKVESYVADLNQN--ITSLPSLGPFSSYVVSSEDPPIRGKLELEWIGEGENGIAVKLGTVGNIALTEATKEVLGSVTPYSITGSLPLVRYLQDNDFDVQLVGYGKSAKYHAENEAADLKDFRQALRILARVVAHLE 443          
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: A0A7S3XZI8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZI8_HETAK)

HSP 1 Score: 171 bits (433), Expect = 2.510e-48
Identity = 85/158 (53.80%), Postives = 115/158 (72.78%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALPTRGSFSRYELPDEGVKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQILARVVKGVE 474
            QIP HAT SGD R+TPFYD+A   AA+E YVA++N   G    P  G++S++ LP+E ++GKL L+W+ +GENGIAC + S GH  L AAT++V G   P++I+G+LPLVRW+QDNG+DVQI GYG SS YHA+NE    + M+ A +IL+R V  +E
Sbjct:  291 QIPPHATASGDIRLTPFYDIADCMAAVERYVAELNADIGQLQGP--GNYSKFVLPEEDLQGKLVLSWLTEGENGIACRIESEGHGVLAAATKDVKGECKPFAINGTLPLVRWLQDNGFDVQIAGYGSSSAYHADNEYLDFDDMKDAIKILSRTVFKLE 446          
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: A0A7S3HS36_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS36_9STRA)

HSP 1 Score: 170 bits (430), Expect = 6.160e-48
Identity = 82/164 (50.00%), Postives = 115/164 (70.12%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSA------GLAALPTRGSFSRYELPDEGVKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQILARVVKGVE 474
            Q+P   TV GD R+TPFY++  V A +  YVA++N +       G   +P  G  S+Y LPDEG+ G++ELTW+ +GENG+AC L S G++A+L AT +VLG   PYSI GSLPL+R +QD G+DVQI GYG+SS+YHA+NEC SL +++ A +I + V+  +E
Sbjct:  278 QLPPECTVQGDIRITPFYNIHDVTAKINTYVAEINANPNVLIEIGSGDMPVHGPHSKYTLPDEGLDGRVELTWIGEGENGVACKLDSVGYNAILEATEKVLGSVKPYSIGGSLPLIRDLQDQGFDVQIAGYGISSRYHADNECSSLASLKSAIKIFSSVIAIME 441          
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: A0A7S2XXJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXJ8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 8.150e-48
Identity = 81/146 (55.48%), Postives = 110/146 (75.34%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALPTRGSFSRYELPDEGVKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQA 438
            QIP +ATVSGD R+ PFY +  V A +E YV D+N S  +  LP RG  S+YE+ DEG+KGKLELTW+ +GE+GIAC L S G+  +  AT+EVLG   P+++SGSLPLVR +QD+G+D+Q+ GYGLS++YHA+NEC  +  M++A
Sbjct:  162 QIPPNATVSGDIRLIPFYSMKEVMARVESYVEDLNNS--VTDLPQRGPASKYEVKDEGMKGKLELTWLSEGEDGIACRLDSEGNKVIQEATKEVLGDVTPFALSGSLPLVRNLQDSGFDIQMVGYGLSTRYHADNECVDINDMKKA 305          
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: A0A482SPY1_9ARCH (M20/M25/M40 family metallo-hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPY1_9ARCH)

HSP 1 Score: 157 bits (398), Expect = 3.200e-43
Identity = 79/154 (51.30%), Postives = 107/154 (69.48%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALP-TRGSFSRYELPDEGVKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQILARV 459
            Q+P    V GD R +PFYD+  +  A+E YVA++N +  +   P  RG  S+Y LP+E   GKL L W+   +NG+AC L S G  AL+AAT +VLG A PYSI GSLPL+R +QD G+DVQI GYG+S++YHA+NEC SL + + AT+IL++V
Sbjct:  288 QLPGGVMVEGDIRSSPFYDIKNLMTAIERYVAEINENPSMVENPEVRGPHSKYNLPEESRPGKLTLKWLTHADNGVACRLDSKGFKALVAATNDVLGFAKPYSIGGSLPLIRELQDQGFDVQISGYGISARYHADNECASLSSFKNATKILSKV 441          
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: F4PPQ9_CAVFA (Acetylornithine deacetylase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PPQ9_CAVFA)

HSP 1 Score: 156 bits (394), Expect = 1.050e-42
Identity = 80/158 (50.63%), Postives = 110/158 (69.62%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALPTRGSFSRYELPDEGVKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQILARVVKGVE 474
            QIP  AT+ GD R+TPFYD+  VRA +EGYV D+N  A +  L +RG F +YE+P +GVKG++E+ WV  G  GIAC++ SAG+ AL  AT+E  G   P S  G+LPLV+ +QD+G+DVQI G+G    YHA+NE  +L   ++ATQIL R ++ +E
Sbjct:  277 QIPGEATICGDIRLTPFYDMTDVRAKIEGYVKDIN--ANITQLRSRGPFHKYEIPKDGVKGRVEIEWVGVGSPGIACNIDSAGYKALGQATKEATGELKPVSTCGTLPLVKELQDSGFDVQITGFGREDCYHADNEYANLSDFKKATQILTRTIQLLE 432          
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: A0A7S1ZWB0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWB0_TRICV)

HSP 1 Score: 147 bits (371), Expect = 5.800e-42
Identity = 89/163 (54.60%), Postives = 107/163 (65.64%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALPTRGSFSRYELPDEGV---KGKLELTWVFDGEN-----GIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQILARVVK 465
            QIP   TVSGD R+TPFYD   V   +EGYV D+N  A L  L TRG  S+Y L  + V   +GKLE+TW  D E+     GIACDL S G +AL+ AT EV G A PY+I+GSLPLVR MQ  G+DVQI G+GLS  YHA+NE   L  MR A +IL RV++
Sbjct:   15 QIPPWTTVSGDVRLTPFYDPVDVMERVEGYVNDIN--ANLGCLGTRGPCSKYTLEGDDVDVREGKLEITWNDDRESVRQMEGIACDLDSPGLAALVTATEEVKGSAKPYAITGSLPLVRSMQRVGFDVQITGFGLSKTYHADNEYVLLSDMRDAFRILMRVIE 175          
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Match: A0A388M8B5_CHABU (M20_dimer domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M8B5_CHABU)

HSP 1 Score: 154 bits (390), Expect = 6.560e-42
Identity = 77/154 (50.00%), Postives = 108/154 (70.13%), Query Frame = 1
Query:    1 QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALPTRGSFSRYELPDEGVKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAPYSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQILARVV 462
            QIP   ++SGDCR+TPFYD+  V A +  YV D+N  A +  LP+RG  S+Y LP E ++GKLE+++     +GIAC+L S G+ AL  A++EVLG   P+SI+GSLPLVR +Q++G+D+QI GYG+ S YHA NE C L  M+Q  +I  R++
Sbjct:  302 QIPSDCSISGDCRITPFYDIKKVMAKIREYVDDIN--ADIEGLPSRGPASKYTLPAEELRGKLEVSFEESAVSGIACNLSSEGYKALCTASKEVLGSLQPFSITGSLPLVRDLQESGFDIQIMGYGVLSTYHARNEYCLLNGMKQGFKIAVRII 453          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13033.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZIU8_9STRA4.310e-7071.07Acetylornithine deacetylase (Fragment) n=1 Tax=Tri... [more]
A0A6H5JGN0_9PHAE1.320e-5865.19M20_dimer domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9D205_9STRA1.680e-4855.63M20_dimer domain-containing protein n=2 Tax=Monodo... [more]
A0A7S3XZI8_HETAK2.510e-4853.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3HS36_9STRA6.160e-4850.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2XXJ8_9STRA8.150e-4855.48Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A482SPY1_9ARCH3.200e-4351.30M20/M25/M40 family metallo-hydrolase n=1 Tax=archa... [more]
F4PPQ9_CAVFA1.050e-4250.63Acetylornithine deacetylase n=1 Tax=Cavenderia fas... [more]
A0A7S1ZWB0_TRICV5.800e-4254.60Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A388M8B5_CHABU6.560e-4250.00M20_dimer domain-containing protein n=1 Tax=Chara ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13033contigP-wetherbeei_contig13033:138..868 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LRK6
PFAMsM20_dimer,Peptidase_M20,Peptidase_M28
Model size504
Max annot lvl2759|Eukaryota
KEGG rclassRC00064,RC00300
KEGG koko:K01438
KEGG ReactionR00669,R09107
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028,M00845
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.08e-59
EggNOG OGsCOG0624@1|root,KOG2276@2759|Eukaryota
EC3.5.1.16
Descriptiondipeptidase activity
Cds size504
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185971.6565983-CDS-P-wetherbeei_contig13033:137..5001683185971.6565983-CDS-P-wetherbeei_contig13033:137..500Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13033 138..500 +
1683185971.6707554-CDS-P-wetherbeei_contig13033:727..8681683185971.6707554-CDS-P-wetherbeei_contig13033:727..868Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13033 728..868 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13033.1.1prot_P-wetherbeei_contig13033.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13033 138..868 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13033.1.1

>prot_P-wetherbeei_contig13033.1.1 ID=prot_P-wetherbeei_contig13033.1.1|Name=mRNA_P-wetherbeei_contig13033.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp
QIPQHATVSGDCRVTPFYDVAAVRAAMEGYVADMNTSAGLAALPTRGSFS
RYELPDEGVKGKLELTWVFDGENGIACDLGSAGHSALLAATREVLGGAAP
YSISGSLPLVRWMQDNGYDVQICGYGLSSKYHAENECCSLEAMRQATQIL
ARVVKGVEAATAAEEGA*
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mRNA from alignment at P-wetherbeei_contig13033:138..868+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13033.1.1 ID=mRNA_P-wetherbeei_contig13033.1.1|Name=mRNA_P-wetherbeei_contig13033.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=731bp|location=Sequence derived from alignment at P-wetherbeei_contig13033:138..868+ (Phaeothamnion wetherbeei SAG_119_79)
CAGATCCCGCAGCACGCCACCGTCTCGGGGGACTGCCGCGTCACCCCCTT CTACGACGTCGCCGCCGTCCGCGCCGCTATGGAGGGCTACGTCGCTGACA TGAATACATCTGCGGGACTGGCGGCACTGCCGACGCGGGGATCGTTCAGC CGCTACGAGCTGCCGGACGAGGGAGTGAAGGGGAAACTGGAGCTGACTTG GGTTTTCGACGGGGAGAACGGTATCGCGTGCGATTTGGGCAGCGCGGGCC ACAGTGCGCTGCTGGCAGCGACGCGGGAGGTGCTGGGCGGGGCGGCGCCG TACTCGATCAGCGGGAGCCTGCCGCTAGTGCGGTGGATGCAGGACAACGG CTACGACGTCCAGGTGCGTGTGGAAATGGGAGAAGGCCACCGTTGTGCCC AGTCATTTATCTGAATGTTTTTATTGTTGGTTCGCTTTGCGGCGAAAGGT GAAATATGTAATGTATTTTTGATTAAGGCTCGAACTGTTACGGATACAAT TTTCTCGGCCTATCCTAGGTGCTAGTAACCGTCCGAGCATTCTTTTCTTT TCGCCGGTCGCGGCACGAATGCCGTTTCCGACGGTTGCAGATTTGTGGAT ATGGGCTGAGCTCCAAGTACCACGCCGAGAACGAGTGCTGTAGCCTCGAG GCCATGCGGCAGGCGACGCAGATCCTCGCCCGCGTCGTCAAGGGCGTCGA AGCCGCCACCGCTGCCGAGGAAGGAGCATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13033:138..868+

>mRNA_P-wetherbeei_contig13033.1.1 ID=mRNA_P-wetherbeei_contig13033.1.1|Name=mRNA_P-wetherbeei_contig13033.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig13033:138..868+ (Phaeothamnion wetherbeei SAG_119_79)
CAGATCCCGCAGCACGCCACCGTCTCGGGGGACTGCCGCGTCACCCCCTT
CTACGACGTCGCCGCCGTCCGCGCCGCTATGGAGGGCTACGTCGCTGACA
TGAATACATCTGCGGGACTGGCGGCACTGCCGACGCGGGGATCGTTCAGC
CGCTACGAGCTGCCGGACGAGGGAGTGAAGGGGAAACTGGAGCTGACTTG
GGTTTTCGACGGGGAGAACGGTATCGCGTGCGATTTGGGCAGCGCGGGCC
ACAGTGCGCTGCTGGCAGCGACGCGGGAGGTGCTGGGCGGGGCGGCGCCG
TACTCGATCAGCGGGAGCCTGCCGCTAGTGCGGTGGATGCAGGACAACGG
CTACGACGTCCAGATTTGTGGATATGGGCTGAGCTCCAAGTACCACGCCG
AGAACGAGTGCTGTAGCCTCGAGGCCATGCGGCAGGCGACGCAGATCCTC
GCCCGCGTCGTCAAGGGCGTCGAAGCCGCCACCGCTGCCGAGGAAGGAGC
ATAG
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