mRNA_P-wetherbeei_contig13014.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13014.2.1
Unique NamemRNA_P-wetherbeei_contig13014.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig13014.2.1 vs. uniprot
Match: A0A835ZA04_9STRA (DUF5672 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA04_9STRA)

HSP 1 Score: 113 bits (283), Expect = 5.200e-29
Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 1 
Query:    4 NDKVFVLVETRNAFWLPYVIQNFVNVLGPEWNVHLFVARDVAVCLQQEFNDCAFDVTI--IQDRMTVPEYSAFLEKPLFWSTIREEHVLIGQLDTVILRPIPSLYFKFAFVGAPCG 345
            ND+V V+VETR+AF+LP VI+N  + LG EWN H+F    +   L+  F +CAF  T   ++   T  +YSA L +P FW+ IREE +LI QLDT+ LR IP    ++ ++GAPCG
Sbjct:   13 NDRVAVIVETRDAFFLPLVIKNAADKLGNEWNTHIFAPPALLATLRGLFPNCAFTTTKLHVEPPFTSSKYSALLRRPSFWNAIREETILIFQLDTLFLRGIPKWAEEYDYIGAPCG 128
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BLAST of mRNA_P-wetherbeei_contig13014.2.1 vs. uniprot
Match: A0A835Z1P7_9STRA (DUF5672 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P7_9STRA)

HSP 1 Score: 105 bits (262), Expect = 8.920e-26
Identity = 49/116 (42.24%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:    4 NDKVFVLVETRNAFWLPYVIQNFVNVLGPEWNVHLFVARDVAVCLQQEFNDCAFDVTIIQ--DRMTVPEYSAFLEKPLFWSTIREEHVLIGQLDTVILRPIPSLYFKFAFVGAPCG 345
            N +V V+VETR+AF+LP VI N V+ LG +WN+H+    +V   L++   +C F  T +    +++  +YSA L +  FWS IREE +L+ QLD V+LR +P+    + ++GAPCG
Sbjct:   26 NTRVAVIVETRDAFFLPLVIANTVDKLGADWNLHVIAPAEVLASLRKSLPECEFASTTLACPTKISTSQYSALLRRRSFWSRIREEIILVFQLDVVMLRGVPAWAESYDYIGAPCG 141
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BLAST of mRNA_P-wetherbeei_contig13014.2.1 vs. uniprot
Match: A0A6C0EHQ7_9ZZZZ (DUF5672 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EHQ7_9ZZZZ)

HSP 1 Score: 76.3 bits (186), Expect = 1.630e-14
Identity = 39/114 (34.21%), Postives = 65/114 (57.02%), Query Frame = 1 
Query:    4 NDKVFVLVETRNAFWLPYVIQNFVNVLGPEWNVHLFVARDVAVCLQQEFNDCAFDVTIIQDRMTVPEYSAFLEKPLFWSTIREEHVLIGQLDTVILRPIPSLYFKFAFVGAPCG 345
            ++K  V++ETR +FWLP VI+N V+   P +N+++F   +V   L+       + + I      + EY+  L    FW  I+EE+++I QLDT+ LR   S + ++ + GA CG
Sbjct:   25 SNKCLVIIETRPSFWLPLVIKNAVDKC-PGYNLYVFCTPNVNQFLRDALEGDYYRIIINTYMQNIQEYNQLLTNYDFWDQIKEENIIIFQLDTLFLRTPTSEHMQYDYNGAVCG 137
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13014.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZA04_9STRA5.200e-2947.41DUF5672 domain-containing protein n=1 Tax=Tribonem... [more]
A0A835Z1P7_9STRA8.920e-2642.24DUF5672 domain-containing protein n=1 Tax=Tribonem... [more]
A0A6C0EHQ7_9ZZZZ1.630e-1434.21DUF5672 domain-containing protein n=1 Tax=viral me... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13014contigP-wetherbeei_contig13014:1551..1895 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog72019.SARC_10739T0
Model size345
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.54e-05
EggNOG OGs28PGR@1|root,2QW4V@2759|Eukaryota,38B4X@33154|Opisthokonta
Descriptionnegative regulation of septation initiation signaling
Cds size345
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185970.9504201-CDS-P-wetherbeei_contig13014:1550..18951683185970.9504201-CDS-P-wetherbeei_contig13014:1550..1895Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13014 1551..1895 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13014.2.1prot_P-wetherbeei_contig13014.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13014 1551..1895 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13014.2.1

>prot_P-wetherbeei_contig13014.2.1 ID=prot_P-wetherbeei_contig13014.2.1|Name=mRNA_P-wetherbeei_contig13014.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp
NNDKVFVLVETRNAFWLPYVIQNFVNVLGPEWNVHLFVARDVAVCLQQEF
NDCAFDVTIIQDRMTVPEYSAFLEKPLFWSTIREEHVLIGQLDTVILRPI
PSLYFKFAFVGAPCG
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mRNA from alignment at P-wetherbeei_contig13014:1551..1895+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13014.2.1 ID=mRNA_P-wetherbeei_contig13014.2.1|Name=mRNA_P-wetherbeei_contig13014.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig13014:1551..1895+ (Phaeothamnion wetherbeei SAG_119_79)
AATAACGACAAAGTGTTTGTCCTTGTCGAAACCAGAAATGCTTTCTGGCT
TCCATATGTCATTCAAAATTTTGTCAACGTTCTTGGCCCAGAGTGGAACG
TCCATCTTTTTGTTGCAAGAGATGTTGCCGTTTGCCTGCAACAGGAGTTC
AATGATTGCGCATTTGACGTCACAATCATCCAAGACCGCATGACGGTACC
AGAATACAGCGCATTCCTGGAAAAGCCGCTGTTTTGGTCAACGATACGCG
AGGAGCACGTCCTCATTGGGCAACTGGACACGGTCATCTTGCGGCCAATT
CCGTCTTTGTATTTCAAATTCGCCTTTGTGGGTGCTCCGTGCGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13014:1551..1895+

>mRNA_P-wetherbeei_contig13014.2.1 ID=mRNA_P-wetherbeei_contig13014.2.1|Name=mRNA_P-wetherbeei_contig13014.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig13014:1551..1895+ (Phaeothamnion wetherbeei SAG_119_79)
AATAACGACAAAGTGTTTGTCCTTGTCGAAACCAGAAATGCTTTCTGGCT
TCCATATGTCATTCAAAATTTTGTCAACGTTCTTGGCCCAGAGTGGAACG
TCCATCTTTTTGTTGCAAGAGATGTTGCCGTTTGCCTGCAACAGGAGTTC
AATGATTGCGCATTTGACGTCACAATCATCCAAGACCGCATGACGGTACC
AGAATACAGCGCATTCCTGGAAAAGCCGCTGTTTTGGTCAACGATACGCG
AGGAGCACGTCCTCATTGGGCAACTGGACACGGTCATCTTGCGGCCAATT
CCGTCTTTGTATTTCAAATTCGCCTTTGTGGGTGCTCCGTGCGGA
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