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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1582 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-14_003580.1 |
| Cds size | 1581 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185969.548146-CDS-P-wetherbeei_contig13:17726..17951 | 1683185969.548146-CDS-P-wetherbeei_contig13:17726..17951 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig13 17727..17951 + |
| 1683185969.555907-CDS-P-wetherbeei_contig13:18191..19490 | 1683185969.555907-CDS-P-wetherbeei_contig13:18191..19490 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig13 18192..19490 + |
| 1683185969.5631244-CDS-P-wetherbeei_contig13:19829..19886 | 1683185969.5631244-CDS-P-wetherbeei_contig13:19829..19886 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig13 19830..19886 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13.4.1 >prot_P-wetherbeei_contig13.4.1 ID=prot_P-wetherbeei_contig13.4.1|Name=mRNA_P-wetherbeei_contig13.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=527bp
EKPGQAPAIGAAPPVWDGLPLSGGGPADYEPPRTADLTPDVLSKAKVFED
EIVAALAVDARNGGSAFGGNLDLIEALGICGDGAGSIEIETSWSSAGSVS
PSAASAVSPSAASAVSPSPTPKPASAGPMEASAGGGGDSGGTQPSLLGRQ
QPKSPQRGRQKAGSASAMLPQAELPWEVADPGVSPAISSGSFREGHSPGS
LQFAAADSASGSQCSNKATAEAAREAVARWDSTELPPLTPATADERKPGE
RDGGSLDELSGGERYAADLWMDDSVESAPKSARAPIRSGGGSSIGSRTGG
GPVSESGSGHANANAASDFEEALAAAALARRHRKAPWDDDEDGGGRASGG
DGSSVFSSAGLAAAVKRVTATRTTGEHALAPMSNRGSAGGKGAPSAQPLP
APSIAAAAAAPTATRSAAATPATPAAAAAAAVAADSSYLHFSRPLDVLIR
PGDRPLQVALRDNEALTLVAARGSGVLSITLQEEGGRGRPVDGAIVFDSA
ARFGASAELNHHFPPIRGFAYVFRVRP back to topmRNA from alignment at P-wetherbeei_contig13:17727..19886+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig13.4.1 ID=mRNA_P-wetherbeei_contig13.4.1|Name=mRNA_P-wetherbeei_contig13.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2160bp|location=Sequence derived from alignment at P-wetherbeei_contig13:17727..19886+ (Phaeothamnion wetherbeei SAG_119_79)
GAAAAGCCTGGCCAAGCACCGGCCATTGGAGCCGCTCCACCGGTGTGGGA
CGGCCTCCCCCTGAGCGGCGGCGGCCCGGCCGACTACGAGCCGCCGCGAA
CGGCAGACCTGACGCCGGACGTGCTTTCCAAGGCAAAAGTGTTCGAGGAC
GAGATTGTTGCGGCGCTCGCCGTAGACGCCCGAAACGGCGGCAGCGCCTT
TGGCGGGAACTTGGATCTAATCGAGGTGAGTAGCTTTCCCTCCGCATCAA
ATCAGCGTGGTGCTCCCAGGATCGCCGGTTTCTTGAAGTCGTCAGAAGTT
GTCATTGTTACTCTCCCTCCCAGATTTGCGTGCAGTCCATCCCTCTAGAA
CACGGCTGGAAATGTGGGATAGAAAGAGATCAGAGCTTGCCTCTGCGGCA
AGCAATAACTGCTATCCAGTTTTTATGATGCCCTCCTCTTACACCGCCAT
TACTCCTGCGGGCAGGCACTCGGAATTTGCGGAGACGGCGCCGGATCCAT
CGAGATTGAAACATCTTGGTCCTCTGCCGGCAGCGTGTCGCCGTCTGCAG
CATCGGCAGTCTCGCCGTCTGCAGCATCGGCAGTCTCGCCGTCACCAACG
CCGAAACCTGCTTCGGCAGGCCCGATGGAAGCCAGTGCTGGCGGCGGCGG
CGACAGCGGCGGTACACAGCCATCACTGTTGGGCCGGCAGCAACCAAAGT
CACCGCAGCGGGGGCGGCAGAAAGCGGGAAGTGCCAGCGCCATGCTCCCG
CAGGCGGAGCTGCCGTGGGAGGTTGCCGACCCCGGCGTCTCTCCTGCCAT
TTCTTCCGGAAGTTTCCGGGAAGGTCACTCGCCCGGTTCGCTGCAATTTG
CAGCCGCAGACTCGGCATCGGGAAGTCAATGTTCCAATAAAGCCACGGCT
GAAGCGGCGCGGGAAGCCGTCGCTCGGTGGGACAGCACGGAGCTGCCGCC
ACTGACGCCGGCAACGGCGGACGAACGAAAACCCGGGGAAAGAGATGGCG
GATCGCTCGACGAGTTATCTGGGGGGGAGCGATACGCCGCCGACCTATGG
ATGGACGACAGCGTGGAGAGCGCGCCAAAAAGTGCTCGTGCGCCCATCCG
CAGCGGCGGTGGCAGCAGCATCGGCAGCCGCACTGGCGGCGGACCCGTGA
GCGAGAGCGGTAGCGGGCACGCCAACGCAAACGCCGCGTCAGACTTCGAA
GAGGCCCTCGCCGCGGCGGCATTGGCGAGGAGGCACCGCAAGGCCCCTTG
GGACGACGATGAAGATGGTGGCGGCAGGGCCAGCGGCGGCGATGGTAGCA
GCGTCTTTTCTTCGGCCGGGTTGGCGGCGGCGGTTAAAAGGGTGACGGCG
ACGCGGACGACAGGAGAACACGCGCTTGCGCCAATGAGCAACAGAGGCTC
TGCGGGCGGGAAGGGTGCACCGTCCGCCCAGCCGCTACCAGCGCCCTCAA
TCGCGGCAGCCGCTGCAGCACCGACCGCCACGAGGTCAGCTGCGGCGACG
CCGGCGACGCCAGCAGCGGCAGCGGCGGCGGCGGTGGCGGCGGATTCTTC
GTACCTGCACTTCTCCCGTCCGTTGGATGTCCTGATCAGGCCCGGTGACC
GGCCGCTGCAGGTGGCGCTTCGCGACAACGAGGCGCTGACGCTGGTGGCG
GCGCGCGGCTCCGGCGTGCTGTCTATCACGCTGCAGGAGGAGGGCGGCCG
CGGCCGGCCGGTCGACGGCGCCATCGTGTTCGACAGCGCCGCCCGCTTTG
GCGCGTCTGCCGAGGTGGGCTTCACTTGCTTTTCGTCCCGCCGGCTCAAT
TGTTTGGTTGGCTGCTTCGTTTCTGGGGAGCAAAACCATTGCAGTGTAAC
GATCCACAGTTCCTGCCAGCCGCTGGAGCCGAGCTTTGTGCGAAGATTTC
GTTGATTGCCCTCCAACCATTCCGGTGGCCTAGCCGTTGGGCCTCCTGTT
GGTGGGGCCGTGCCGCCGCGTGTACTGTTCTGTTTCCGCACCCATCCAAT
CAACATGTCTATTTCTTCTGTGTCCGGATCAAATCCCTTTCCATTGCCCT
TTCCTTCTGTGCCGTGTTCTCCGGTCTTTTCATCGGTGTTCATCTAAGAG
CAGTTAAACCACCATTTCCCACCGATTCGAGGGTTCGCGTATGTCTTCCG
AGTCCGTCCC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig13:17727..19886+ >mRNA_P-wetherbeei_contig13.4.1 ID=mRNA_P-wetherbeei_contig13.4.1|Name=mRNA_P-wetherbeei_contig13.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1581bp|location=Sequence derived from alignment at P-wetherbeei_contig13:17727..19886+ (Phaeothamnion wetherbeei SAG_119_79)
GAAAAGCCTGGCCAAGCACCGGCCATTGGAGCCGCTCCACCGGTGTGGGA
CGGCCTCCCCCTGAGCGGCGGCGGCCCGGCCGACTACGAGCCGCCGCGAA
CGGCAGACCTGACGCCGGACGTGCTTTCCAAGGCAAAAGTGTTCGAGGAC
GAGATTGTTGCGGCGCTCGCCGTAGACGCCCGAAACGGCGGCAGCGCCTT
TGGCGGGAACTTGGATCTAATCGAGGCACTCGGAATTTGCGGAGACGGCG
CCGGATCCATCGAGATTGAAACATCTTGGTCCTCTGCCGGCAGCGTGTCG
CCGTCTGCAGCATCGGCAGTCTCGCCGTCTGCAGCATCGGCAGTCTCGCC
GTCACCAACGCCGAAACCTGCTTCGGCAGGCCCGATGGAAGCCAGTGCTG
GCGGCGGCGGCGACAGCGGCGGTACACAGCCATCACTGTTGGGCCGGCAG
CAACCAAAGTCACCGCAGCGGGGGCGGCAGAAAGCGGGAAGTGCCAGCGC
CATGCTCCCGCAGGCGGAGCTGCCGTGGGAGGTTGCCGACCCCGGCGTCT
CTCCTGCCATTTCTTCCGGAAGTTTCCGGGAAGGTCACTCGCCCGGTTCG
CTGCAATTTGCAGCCGCAGACTCGGCATCGGGAAGTCAATGTTCCAATAA
AGCCACGGCTGAAGCGGCGCGGGAAGCCGTCGCTCGGTGGGACAGCACGG
AGCTGCCGCCACTGACGCCGGCAACGGCGGACGAACGAAAACCCGGGGAA
AGAGATGGCGGATCGCTCGACGAGTTATCTGGGGGGGAGCGATACGCCGC
CGACCTATGGATGGACGACAGCGTGGAGAGCGCGCCAAAAAGTGCTCGTG
CGCCCATCCGCAGCGGCGGTGGCAGCAGCATCGGCAGCCGCACTGGCGGC
GGACCCGTGAGCGAGAGCGGTAGCGGGCACGCCAACGCAAACGCCGCGTC
AGACTTCGAAGAGGCCCTCGCCGCGGCGGCATTGGCGAGGAGGCACCGCA
AGGCCCCTTGGGACGACGATGAAGATGGTGGCGGCAGGGCCAGCGGCGGC
GATGGTAGCAGCGTCTTTTCTTCGGCCGGGTTGGCGGCGGCGGTTAAAAG
GGTGACGGCGACGCGGACGACAGGAGAACACGCGCTTGCGCCAATGAGCA
ACAGAGGCTCTGCGGGCGGGAAGGGTGCACCGTCCGCCCAGCCGCTACCA
GCGCCCTCAATCGCGGCAGCCGCTGCAGCACCGACCGCCACGAGGTCAGC
TGCGGCGACGCCGGCGACGCCAGCAGCGGCAGCGGCGGCGGCGGTGGCGG
CGGATTCTTCGTACCTGCACTTCTCCCGTCCGTTGGATGTCCTGATCAGG
CCCGGTGACCGGCCGCTGCAGGTGGCGCTTCGCGACAACGAGGCGCTGAC
GCTGGTGGCGGCGCGCGGCTCCGGCGTGCTGTCTATCACGCTGCAGGAGG
AGGGCGGCCGCGGCCGGCCGGTCGACGGCGCCATCGTGTTCGACAGCGCC
GCCCGCTTTGGCGCGTCTGCCGAGTTAAACCACCATTTCCCACCGATTCG
AGGGTTCGCGTATGTCTTCCGAGTCCGTCCC back to top
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