mRNA_P-wetherbeei_contig12982.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12982.2.1
Unique NamemRNA_P-wetherbeei_contig12982.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A1W9IA00_9PROT (CitMHS domain-containing protein n=1 Tax=Proteobacteria bacterium SG_bin9 TaxID=1827385 RepID=A0A1W9IA00_9PROT)

HSP 1 Score: 446 bits (1148), Expect = 2.150e-154
Identity = 217/270 (80.37%), Postives = 244/270 (90.37%), Query Frame = 1
Query:    1 VDLAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            V L FNDFV HL PV+VVVM+VQ IMIH +WG+ ++++PEA+A VMAMKA   IEDWLLLKQSLVVLT VM+GF+ AR LHLEPATIAM+GAA+LMLLDNWAHHSEKAAHNVH TF DVEWITIFFF+GLF+VVHGV+VGGLL LL  KL+  TGGNLA TG+AILWASAILSAIVDNIPFVATMIPLIK MAPA+GG D+I PLWWCLSLGACLGGNGTLIGASANLTVAGI +RNGVPF+F+TYTLYAFPMM+VS+AI+H+YVWWRYF
Sbjct:  175 VGLTFNDFVVHLAPVVVVVMLVQVIMIHALWGRSMQASPEAEARVMAMKAADTIEDWLLLKQSLVVLTAVMLGFIFARQLHLEPATIAMVGAAVLMLLDNWAHHSEKAAHNVHQTFSDVEWITIFFFIGLFIVVHGVEVGGLLSLLGTKLVSATGGNLATTGFAILWASAILSAIVDNIPFVATMIPLIKTMAPAYGGADNIQPLWWCLSLGACLGGNGTLIGASANLTVAGIGDRNGVPFKFVTYTLYAFPMMLVSIAIAHLYVWWRYF 444          
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A537L6S2_9PROT (ArsB/NhaD family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L6S2_9PROT)

HSP 1 Score: 444 bits (1142), Expect = 1.750e-153
Identity = 219/268 (81.72%), Postives = 243/268 (90.67%), Query Frame = 1
Query:    7 LAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            L+FN+FV HLTPVI+VVMV QAIMIH++WGKDL++TPE +A VMAM A  +I+DWLLLKQSLVV+ +VMV FVLARPLHLEPATIAM GAA+LMLLDNW HH+EKAAHN+H TFGDVEWITIFFFVGLF+VVHGV+ GGLL LLA KL+  TGG++A  GYAILWASA LSAIVDNIPFVATMIPLIK+MAPA+GG D I PLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRF+TYT+YA PMMIVSVAI HVYVWWRYF
Sbjct:  177 LSFNEFVIHLTPVILVVMVAQAIMIHLLWGKDLKATPEREARVMAMNATESIKDWLLLKQSLVVIGIVMVAFVLARPLHLEPATIAMFGAAVLMLLDNWVHHTEKAAHNIHQTFGDVEWITIFFFVGLFMVVHGVEYGGLLTLLAEKLVAATGGSMATAGYAILWASAFLSAIVDNIPFVATMIPLIKSMAPAYGGADKIEPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFLTYTMYAMPMMIVSVAICHVYVWWRYF 444          
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A127F3Y0_9HYPH (Arsenical pump family protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F3Y0_9HYPH)

HSP 1 Score: 441 bits (1134), Expect = 2.870e-152
Identity = 213/270 (78.89%), Postives = 244/270 (90.37%), Query Frame = 1
Query:    1 VDLAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            V L FN FV HLTP+I++VM VQAIMIH++WGK L+++PE +A VMAM+ + +I DWLLLKQSL VL +VM+ F+LARPLHLEPATIAM GAA+LMLLDNWAHH+EKAA N+H TFGDVEWITIFFF+GLF+VVHGV+V GLLKLLA +L+  TGGN+AH GYAILW+SA+LSAIVDNIPFVATMIPLIK+MAPAFGGPD I PLWWCLSLGACLGGNGTLIGASANLTVAGI ER+GVPFRF+TY+LYAFPMM+VSVAI HVYVWWRYF
Sbjct:  175 VGLDFNAFVLHLTPIILIVMAVQAIMIHLIWGKGLKASPEREALVMAMQPKLSITDWLLLKQSLAVLAVVMIAFMLARPLHLEPATIAMAGAAVLMLLDNWAHHNEKAAANIHQTFGDVEWITIFFFIGLFIVVHGVEVAGLLKLLADQLVAATGGNMAHAGYAILWSSAVLSAIVDNIPFVATMIPLIKSMAPAFGGPDKIEPLWWCLSLGACLGGNGTLIGASANLTVAGIGERSGVPFRFVTYSLYAFPMMLVSVAICHVYVWWRYF 444          
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A537Q0X0_9PROT (ArsB/NhaD family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537Q0X0_9PROT)

HSP 1 Score: 418 bits (1074), Expect = 3.460e-143
Identity = 202/268 (75.37%), Postives = 236/268 (88.06%), Query Frame = 1
Query:    7 LAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            LAF+DFV HLTPVIVVV++ Q +M H++WG+++R+TP A+A V+AM  E AI DWLLLKQ+L VL +V+V FV ARPL LEPATIAMLGAA+LMLLDNWAHH+EKA+HN+H TFGDVEWITIFFF+GLF++VHGVDV GLL LLAGKL+  TGG+LA TGY ILW SA+LSAI+DNIPFVATMIPL   MA ++GG D I PLWW LSLGACLGGNGTLIGASANLTVAGIAERNG+PFRF+TYT+YAFPMM+VS+ ISHVY+WWRYF
Sbjct:  178 LAFDDFVVHLTPVIVVVLIAQTVMTHLLWGREMRATPAAEARVLAMVPEEAITDWLLLKQALAVLAVVLVAFVFARPLRLEPATIAMLGAAVLMLLDNWAHHTEKASHNIHQTFGDVEWITIFFFIGLFIIVHGVDVSGLLALLAGKLVAATGGDLATTGYVILWGSALLSAIIDNIPFVATMIPL---MAASYGGADKIEPLWWSLSLGACLGGNGTLIGASANLTVAGIAERNGIPFRFLTYTMYAFPMMLVSIVISHVYLWWRYF 442          
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A317I1D6_9PROT (CitMHS domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317I1D6_9PROT)

HSP 1 Score: 414 bits (1065), Expect = 9.170e-142
Identity = 202/268 (75.37%), Postives = 232/268 (86.57%), Query Frame = 1
Query:    7 LAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            L FN FV HLTPVIVVVM VQA+MIH++WG+ +RSTP+ +A VM M  +  I DW+LL+QSL VL +VM+ FVLARPLHLEPATIA+ GAA+LMLLDNW HH+EK + NVH TF DVEWITIFFFVGLFVVVHGV+VGGLL+L A +L+  TGG++A  GYAILWASA LSAIVDNIPFVATMIPLIK MAPA+GGP+ I PLWWCLSLGACLGGNGTL+GASANL VAG+ ERNGVPFRF+T+TLYA PMM+VS+AI HVYVWWRYF
Sbjct:  179 LDFNAFVVHLTPVIVVVMGVQALMIHLLWGRAMRSTPQRRALVMGMSPKETIVDWVLLRQSLAVLGVVMIAFVLARPLHLEPATIALAGAAVLMLLDNWQHHTEKQSENVHRTFSDVEWITIFFFVGLFVVVHGVEVGGLLRLFADRLVAATGGHIATAGYAILWASAFLSAIVDNIPFVATMIPLIKAMAPAYGGPEAIAPLWWCLSLGACLGGNGTLVGASANLMVAGLGERNGVPFRFVTFTLYALPMMVVSIAICHVYVWWRYF 446          
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A257HDK3_9HYPH (CitMHS domain-containing protein n=1 Tax=Rhizobiales bacterium PAR1 TaxID=2015577 RepID=A0A257HDK3_9HYPH)

HSP 1 Score: 409 bits (1050), Expect = 1.670e-139
Identity = 200/270 (74.07%), Postives = 230/270 (85.19%), Query Frame = 1
Query:    1 VDLAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            V L FN FV HLTPVI+VVM VQ +MIH+VWGK + +T E +A VM + A + I DWLLLKQS+VV+  V++GF+ AR LHLEPAT+AM GAA+LM+LDNW+HH E  +  VH TF DVEWITIFFFVGLFVVV+GV+ GGLLK+LA K + LTGG+LA TGY ILW+SA+LSAIVDNIPFVATMIPLIK+MAP+FGGPD I  LWWCLSLGACLGGNGTLIGASANLTVAGI +R GVPF F+TYTLYAFPMM+VSVAISHVYVWWRYF
Sbjct:  176 VGLTFNQFVVHLTPVIIVVMAVQLVMIHLVWGKSMTATAEDKARVMELSAHSTIADWLLLKQSVVVIAAVILGFIFARQLHLEPATVAMGGAAVLMMLDNWSHHGEAESKKVHETFQDVEWITIFFFVGLFVVVYGVETGGLLKMLAEKTVALTGGDLAKTGYVILWSSAVLSAIVDNIPFVATMIPLIKSMAPSFGGPDKIEALWWCLSLGACLGGNGTLIGASANLTVAGIGDREGVPFSFVTYTLYAFPMMLVSVAISHVYVWWRYF 445          
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A327KLC2_9HYPH (CitMHS domain-containing protein n=6 Tax=Rhodoplanes TaxID=29407 RepID=A0A327KLC2_9HYPH)

HSP 1 Score: 407 bits (1046), Expect = 6.770e-139
Identity = 204/268 (76.12%), Postives = 231/268 (86.19%), Query Frame = 1
Query:    7 LAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            L FN F+ HL P++VVVM  Q  MIH++WG+ L+S PE QA VM M   AAIED +LLKQ+L VL LV+VGFVLARPLHLEPATIA+ GAA+LMLLDNW HH+E  + NVH TFGDVEWITIFFFVGLF+VVHGV+VGGLL LLA KL+  TGG+LA  G+AILWASA+LSAIVDNIPFVATMIPLIK+MAPAFGGP+ I PLWWCL+LGACLGGNGTLIGASANL VAG+ ERNGVPFRF+TYTLY FPMM+VS+AISHVYVW RYF
Sbjct:  178 LDFNAFLIHLAPIVVVVMAAQLGMIHLLWGRYLKSIPERQALVMGMDERAAIEDPVLLKQALAVLGLVIVGFVLARPLHLEPATIAIGGAALLMLLDNWQHHAEHQSENVHKTFGDVEWITIFFFVGLFIVVHGVEVGGLLNLLAEKLVAATGGDLAVAGFAILWASAVLSAIVDNIPFVATMIPLIKSMAPAFGGPEAIQPLWWCLALGACLGGNGTLIGASANLIVAGLGERNGVPFRFVTYTLYGFPMMLVSIAISHVYVWLRYF 445          
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A0H5BPM3_BLAVI (Inner membrane protein YbiR n=1 Tax=Blastochloris viridis TaxID=1079 RepID=A0A0H5BPM3_BLAVI)

HSP 1 Score: 405 bits (1042), Expect = 3.020e-138
Identity = 200/270 (74.07%), Postives = 233/270 (86.30%), Query Frame = 1
Query:    1 VDLAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            V + FN F+YHL P++VVV+ VQ +MIH++WG+ L ++ E +A VMAM A   IEDW LLKQSL VL L ++GFV AR +H+EPA++A+ GAA+LMLLDNW HH EKAA N+H TF DVEWITIFFF+GLFVVVHGV+VGGLL LL  +L++LTGG+LA TGYAILW+SA+LSAI+DNIPFVATMIPLIK MAP+FGG D I PLWWCLSLGACLGGNGTLIGASANLTVAGI ERNGVPFRF+TYTLYAFPMM+VSVAISHVYVW RYF
Sbjct:  179 VGIDFNAFLYHLAPLVVVVLAVQLVMIHLMWGRSLAASTENRAHVMAMNAIDTIEDWTLLKQSLAVLGLTVLGFVSARFIHMEPASVALGGAAVLMLLDNWQHHGEKAATNIHKTFSDVEWITIFFFLGLFVVVHGVEVGGLLGLLGRELVELTGGDLALTGYAILWSSAVLSAIIDNIPFVATMIPLIKTMAPSFGGADQIGPLWWCLSLGACLGGNGTLIGASANLTVAGIGERNGVPFRFVTYTLYAFPMMLVSVAISHVYVWLRYF 448          
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A348G4J2_9HYPH (Membrane protein n=3 Tax=Blastochloris TaxID=59282 RepID=A0A348G4J2_9HYPH)

HSP 1 Score: 402 bits (1032), Expect = 9.940e-137
Identity = 198/270 (73.33%), Postives = 230/270 (85.19%), Query Frame = 1
Query:    1 VDLAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            V L FN F+YHL PV  VV++VQ +MIH++WG+ L + P  +A VMAM+    IEDW LLKQSL VL L ++GFV AR + +EPA+IA+ GAAILMLLDNW HH EKAA N+H TF DVEWITIFFF+GLFVVVHGV+VGGLL LL  +L+ LTGG+LA TGYAILW SA+LSAI+DNIPFVATMIPL+K MAPAFGGP+HI PLWWCLSLGACLGGNGTLIGASANLTVAGI ERNGVPFRF+T+TLYAFPMM+VS+AI+H+YVW RYF
Sbjct:  179 VGLDFNAFIYHLAPVAAVVLMVQVVMIHLLWGRSLAAAPADRAHVMAMREIETIEDWTLLKQSLGVLALTILGFVSARFIDMEPASIALGGAAILMLLDNWHHHGEKAATNIHKTFSDVEWITIFFFLGLFVVVHGVEVGGLLGLLGHELVALTGGDLALTGYAILWTSAVLSAIIDNIPFVATMIPLVKTMAPAFGGPEHIEPLWWCLSLGACLGGNGTLIGASANLTVAGIGERNGVPFRFVTFTLYAFPMMLVSIAIAHLYVWLRYF 448          
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Match: A0A537NPM1_9PROT (ArsB/NhaD family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NPM1_9PROT)

HSP 1 Score: 395 bits (1016), Expect = 1.160e-134
Identity = 195/268 (72.76%), Postives = 225/268 (83.96%), Query Frame = 1
Query:    7 LAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKAEAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDNWAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKLIDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPDHILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYAFPMMIVSVAISHVYVWWRYF 810
            L FN F+ HL+P+I+VVM VQAIMIH++WG  L+ST   +A VM M A++ I DW LL QSL+VL  V++ FVLARPLH+EPATIA+ GAA+LMLLDNW HH+EK + +VH TF DVEWITIFFF+GLF+VVHGV+V GLL L+A +L+D TG  LA  GYAILWASA LSAI+DNIPFVATMIPLIK+MA A+GG D I PLWWCLSLGACLGGNGTLIGASANLTVAGIAERNG+PFRF TY LY  PMMIVSVAI H+YVWWRYF
Sbjct:  156 LDFNAFLIHLSPIIIVVMAVQAIMIHLLWGTALKSTSARKALVMGMDAKSTILDWTLLNQSLLVLAFVIITFVLARPLHIEPATIALGGAAVLMLLDNWQHHNEKQSAHVHQTFSDVEWITIFFFIGLFIVVHGVEVAGLLTLIAERLVDATGARLASAGYAILWASAFLSAIIDNIPFVATMIPLIKSMAVAYGGADRIEPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGIPFRFATYMLYGLPMMIVSVAICHLYVWWRYF 423          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12982.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W9IA00_9PROT2.150e-15480.37CitMHS domain-containing protein n=1 Tax=Proteobac... [more]
A0A537L6S2_9PROT1.750e-15381.72ArsB/NhaD family transporter n=1 Tax=Alphaproteoba... [more]
A0A127F3Y0_9HYPH2.870e-15278.89Arsenical pump family protein n=1 Tax=Rhodoplanes ... [more]
A0A537Q0X0_9PROT3.460e-14375.37ArsB/NhaD family transporter n=1 Tax=Alphaproteoba... [more]
A0A317I1D6_9PROT9.170e-14275.37CitMHS domain-containing protein n=1 Tax=Proteobac... [more]
A0A257HDK3_9HYPH1.670e-13974.07CitMHS domain-containing protein n=1 Tax=Rhizobial... [more]
A0A327KLC2_9HYPH6.770e-13976.12CitMHS domain-containing protein n=6 Tax=Rhodoplan... [more]
A0A0H5BPM3_BLAVI3.020e-13874.07Inner membrane protein YbiR n=1 Tax=Blastochloris ... [more]
A0A348G4J2_9HYPH9.940e-13773.33Membrane protein n=3 Tax=Blastochloris TaxID=59282... [more]
A0A537NPM1_9PROT1.160e-13472.76ArsB/NhaD family transporter n=1 Tax=Alphaproteoba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12982contigP-wetherbeei_contig12982:1094..1906 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1380394.JADL01000011_gene3898
PFAMsCitMHS
Model size813
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.8e-113
EggNOG OGsCOG1055@1|root,COG1055@2|Bacteria,1MUX4@1224|Proteobacteria,2V6WW@28211|Alphaproteobacteria,2JRJU@204441|Rhodospirillales
DescriptionCitrate transporter
Cds size813
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185969.164696-CDS-P-wetherbeei_contig12982:1093..19061683185969.164696-CDS-P-wetherbeei_contig12982:1093..1906Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12982 1094..1906 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12982.2.1prot_P-wetherbeei_contig12982.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12982 1094..1906 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12982.2.1

>prot_P-wetherbeei_contig12982.2.1 ID=prot_P-wetherbeei_contig12982.2.1|Name=mRNA_P-wetherbeei_contig12982.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
VDLAFNDFVYHLTPVIVVVMVVQAIMIHIVWGKDLRSTPEAQAAVMAMKA
EAAIEDWLLLKQSLVVLTLVMVGFVLARPLHLEPATIAMLGAAILMLLDN
WAHHSEKAAHNVHSTFGDVEWITIFFFVGLFVVVHGVDVGGLLKLLAGKL
IDLTGGNLAHTGYAILWASAILSAIVDNIPFVATMIPLIKNMAPAFGGPD
HILPLWWCLSLGACLGGNGTLIGASANLTVAGIAERNGVPFRFITYTLYA
FPMMIVSVAISHVYVWWRYF*
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mRNA from alignment at P-wetherbeei_contig12982:1094..1906-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12982.2.1 ID=mRNA_P-wetherbeei_contig12982.2.1|Name=mRNA_P-wetherbeei_contig12982.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig12982:1094..1906- (Phaeothamnion wetherbeei SAG_119_79)
GTCGACCTCGCCTTCAACGATTTCGTCTATCACCTGACGCCGGTGATCGT CGTCGTCATGGTCGTGCAGGCGATCATGATCCACATCGTATGGGGCAAGG ATCTGCGGTCGACGCCCGAGGCGCAAGCCGCGGTGATGGCGATGAAGGCA GAAGCCGCGATCGAAGACTGGCTGCTGCTCAAGCAGTCGCTGGTGGTGCT GACTTTAGTGATGGTCGGCTTCGTGCTGGCACGGCCGCTGCATCTGGAGC CCGCCACCATCGCCATGCTCGGCGCCGCAATCCTGATGCTGCTCGACAAC TGGGCGCATCACAGCGAGAAAGCCGCACATAATGTTCACTCCACGTTCGG CGACGTCGAGTGGATCACCATCTTCTTCTTTGTCGGCCTGTTCGTTGTGG TGCATGGCGTCGATGTCGGCGGCCTGCTCAAGCTTCTGGCCGGCAAGCTG ATCGACCTCACCGGCGGCAACCTGGCGCACACCGGCTACGCCATCCTGTG GGCGTCGGCGATCCTGTCGGCGATCGTCGACAACATCCCCTTCGTCGCCA CCATGATCCCGCTGATCAAGAACATGGCGCCGGCCTTCGGCGGGCCCGAC CACATCCTGCCGCTGTGGTGGTGCCTGTCGCTCGGGGCTTGCCTGGGCGG CAACGGCACTTTGATCGGCGCTTCGGCCAACCTGACGGTCGCCGGCATCG CCGAGCGAAACGGCGTCCCGTTCCGCTTCATCACCTACACGCTCTATGCG TTCCCGATGATGATCGTGTCGGTGGCAATCAGTCACGTTTATGTCTGGTG GCGGTATTTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12982:1094..1906-

>mRNA_P-wetherbeei_contig12982.2.1 ID=mRNA_P-wetherbeei_contig12982.2.1|Name=mRNA_P-wetherbeei_contig12982.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig12982:1094..1906- (Phaeothamnion wetherbeei SAG_119_79)
GTCGACCTCGCCTTCAACGATTTCGTCTATCACCTGACGCCGGTGATCGT
CGTCGTCATGGTCGTGCAGGCGATCATGATCCACATCGTATGGGGCAAGG
ATCTGCGGTCGACGCCCGAGGCGCAAGCCGCGGTGATGGCGATGAAGGCA
GAAGCCGCGATCGAAGACTGGCTGCTGCTCAAGCAGTCGCTGGTGGTGCT
GACTTTAGTGATGGTCGGCTTCGTGCTGGCACGGCCGCTGCATCTGGAGC
CCGCCACCATCGCCATGCTCGGCGCCGCAATCCTGATGCTGCTCGACAAC
TGGGCGCATCACAGCGAGAAAGCCGCACATAATGTTCACTCCACGTTCGG
CGACGTCGAGTGGATCACCATCTTCTTCTTTGTCGGCCTGTTCGTTGTGG
TGCATGGCGTCGATGTCGGCGGCCTGCTCAAGCTTCTGGCCGGCAAGCTG
ATCGACCTCACCGGCGGCAACCTGGCGCACACCGGCTACGCCATCCTGTG
GGCGTCGGCGATCCTGTCGGCGATCGTCGACAACATCCCCTTCGTCGCCA
CCATGATCCCGCTGATCAAGAACATGGCGCCGGCCTTCGGCGGGCCCGAC
CACATCCTGCCGCTGTGGTGGTGCCTGTCGCTCGGGGCTTGCCTGGGCGG
CAACGGCACTTTGATCGGCGCTTCGGCCAACCTGACGGTCGCCGGCATCG
CCGAGCGAAACGGCGTCCCGTTCCGCTTCATCACCTACACGCTCTATGCG
TTCCCGATGATGATCGTGTCGGTGGCAATCAGTCACGTTTATGTCTGGTG
GCGGTATTTCTGA
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