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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1199 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-15_001120.1 |
| Cds size | 1197 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185968.7938352-CDS-P-wetherbeei_contig12973:2..161 | 1683185968.7938352-CDS-P-wetherbeei_contig12973:2..161 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig12973 3..161 + |
| 1683185968.803895-CDS-P-wetherbeei_contig12973:675..1657 | 1683185968.803895-CDS-P-wetherbeei_contig12973:675..1657 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig12973 676..1657 + |
| 1683185968.8131738-CDS-P-wetherbeei_contig12973:1851..1907 | 1683185968.8131738-CDS-P-wetherbeei_contig12973:1851..1907 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig12973 1852..1907 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12973.1.1 >prot_P-wetherbeei_contig12973.1.1 ID=prot_P-wetherbeei_contig12973.1.1|Name=mRNA_P-wetherbeei_contig12973.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=399bp
PSADGSGPSAALDSFKPSSGMRGGGVVDDAHLDPAIAGAMLQRSSSAPPV
ADNVAEWAGASQGYLRGTGGGGSATDASNLDYYYYYYAPHSLNPRLPRDS
ASSGGGGGGGGGGGCGVGFSLGGSSSSGGSKSAGAAAASATGAAAAAPAA
GSSLDAHGGLSSVSNGSHRSASPSLGYEGFGTTAERPVDADGQGRSSPPP
PEQRRSPEVRGNERAHSSPSPGRDGGRGGGEGGSGGGDAGTVLDLMNQRD
SQHFPGFGEDNVHGPSTLGMSAGGGEGASSGVAAGGSGGTVGAEGANDGG
SGAVTGGAGMEASSLQDAQAHSRGNGHHAASYHAPPHHQQHRVGPPLHHA
NRHSALDDGRGHYPHRGGPGGGGGIGGAGAAKRSPGAAAICRIRAAAGT back to topmRNA from alignment at P-wetherbeei_contig12973:3..1908+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig12973.1.1 ID=mRNA_P-wetherbeei_contig12973.1.1|Name=mRNA_P-wetherbeei_contig12973.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1906bp|location=Sequence derived from alignment at P-wetherbeei_contig12973:3..1908+ (Phaeothamnion wetherbeei SAG_119_79)
CCCAGCGCGGACGGTTCCGGACCGTCCGCGGCTCTCGATTCATTCAAACC
CAGTAGCGGCATGCGCGGCGGTGGGGTCGTCGACGACGCGCACTTGGATC
CTGCCATTGCAGGAGCCATGCTTCAGCGCTCGAGCTCAGCACCGCCTGTG
GCTGATAACGTAAGTGGACGGAAAATCGCTGCTTTCGCAGCGTCTCTTCT
CTATGTACTGCAGCTTTGCGAAGGTTTGGCTTCGGCTGCTGCCTACGACG
TAGAAATTTTTACATGTCATACCCACTGTCTGTCATGTCCTACCCAACCC
ATATGTCTATCACGAAGATGAACGCCTGGCCTTGCTTACGGTCTTTTGCC
GTTAAAAAGCGCTTTTTTCGTAGTTTGTAGGATTGCTGCTTTAATGGTAG
GATTAAGGGAATGCTGTGTTTTGACATTGCCCGGGAGTGGTGGCAGCAAT
TTGGAACCTACCTTGTAAGGGTACACGACATGTATTACGACGAAATTGGT
GCTGGAATGGATTACCCGCACCGGCTTGTAGCAACCAAGGGCCAAGGGAT
CATTGTTGGCGATAATGACGGTTGTCCAACCGGCGTTCGCTTTCAACCAC
CAACTCAAAATCCTTACCGAGTCCTTTTTTCTCCCTTCTTTGACCACGTC
TGCGCTCCAACTGAACTTGGCAGGTCGCGGAGTGGGCAGGCGCGAGCCAG
GGATACCTCCGTGGCACTGGGGGCGGCGGCTCGGCGACCGACGCTTCAAA
CCTCGACTATTACTACTACTACTACGCCCCACACAGCCTCAACCCACGCC
TCCCGCGCGACTCCGCTTCTAGCGGCGGCGGCGGCGGCGGCGGTGGGGGC
GGCGGTTGCGGCGTGGGCTTCTCCCTAGGCGGCAGCAGCAGCAGTGGTGG
CAGCAAGTCGGCTGGGGCTGCCGCTGCGTCTGCCACCGGCGCCGCCGCTG
CTGCGCCTGCCGCCGGATCGAGCTTGGACGCGCACGGCGGCCTGTCGTCG
GTCTCCAATGGCAGCCACCGTTCTGCCTCGCCGAGCCTGGGGTACGAGGG
CTTTGGCACCACCGCGGAGCGGCCGGTGGATGCCGACGGCCAGGGGCGGA
GTTCGCCACCGCCACCAGAGCAGCGGCGGTCGCCCGAGGTCCGAGGCAAC
GAGCGCGCTCACTCGTCGCCATCGCCGGGCCGCGACGGCGGGAGAGGAGG
CGGAGAAGGCGGCAGCGGAGGCGGCGACGCCGGCACGGTGCTGGATCTGA
TGAACCAGCGGGATTCGCAGCACTTCCCGGGCTTCGGGGAGGACAACGTG
CACGGTCCCTCCACTTTGGGAATGTCCGCTGGGGGTGGCGAGGGCGCTTC
TTCCGGCGTGGCGGCAGGCGGGAGCGGCGGCACTGTCGGGGCAGAAGGGG
CGAACGACGGCGGCAGCGGGGCGGTTACCGGCGGCGCGGGGATGGAGGCA
TCGTCGTTGCAGGATGCGCAGGCACACAGCCGCGGGAACGGCCACCACGC
GGCATCGTACCACGCGCCTCCACACCACCAGCAGCACCGCGTGGGGCCGC
CGTTGCACCACGCCAACCGCCACTCGGCGCTGGATGACGGGCGGGGCCAT
TACCCGCATCGAGGCGGCCCCGGCGGCGGGGGAGGCATTGGCGGCGCCGG
CGCCGGCGGCGGCGGGTACGGGCAGCGAGGGCCGTACGACCGGCGGGGGC
CTCACATGCAGCAGCAGCAGCAGGGACGGCACGCGATGGACGGCCTCGAA
AGCGCCATGCAGGGTCTATCCATGGGCCGGGGGGGCGGCGGCGGCGGCGG
CGTCAGCGGCGGCATGGGCGGCGGTGGTGCCGGCGCCGGCATGGGGCAGC
AAAGCGCTCTCCTGGCGCAGCAGCGATATGCCGCATACGAGCTGCAGCAG
GCACAG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig12973:3..1908+ >mRNA_P-wetherbeei_contig12973.1.1 ID=mRNA_P-wetherbeei_contig12973.1.1|Name=mRNA_P-wetherbeei_contig12973.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1197bp|location=Sequence derived from alignment at P-wetherbeei_contig12973:3..1908+ (Phaeothamnion wetherbeei SAG_119_79)
CCCAGCGCGGACGGTTCCGGACCGTCCGCGGCTCTCGATTCATTCAAACC
CAGTAGCGGCATGCGCGGCGGTGGGGTCGTCGACGACGCGCACTTGGATC
CTGCCATTGCAGGAGCCATGCTTCAGCGCTCGAGCTCAGCACCGCCTGTG
GCTGATAACGTCGCGGAGTGGGCAGGCGCGAGCCAGGGATACCTCCGTGG
CACTGGGGGCGGCGGCTCGGCGACCGACGCTTCAAACCTCGACTATTACT
ACTACTACTACGCCCCACACAGCCTCAACCCACGCCTCCCGCGCGACTCC
GCTTCTAGCGGCGGCGGCGGCGGCGGCGGTGGGGGCGGCGGTTGCGGCGT
GGGCTTCTCCCTAGGCGGCAGCAGCAGCAGTGGTGGCAGCAAGTCGGCTG
GGGCTGCCGCTGCGTCTGCCACCGGCGCCGCCGCTGCTGCGCCTGCCGCC
GGATCGAGCTTGGACGCGCACGGCGGCCTGTCGTCGGTCTCCAATGGCAG
CCACCGTTCTGCCTCGCCGAGCCTGGGGTACGAGGGCTTTGGCACCACCG
CGGAGCGGCCGGTGGATGCCGACGGCCAGGGGCGGAGTTCGCCACCGCCA
CCAGAGCAGCGGCGGTCGCCCGAGGTCCGAGGCAACGAGCGCGCTCACTC
GTCGCCATCGCCGGGCCGCGACGGCGGGAGAGGAGGCGGAGAAGGCGGCA
GCGGAGGCGGCGACGCCGGCACGGTGCTGGATCTGATGAACCAGCGGGAT
TCGCAGCACTTCCCGGGCTTCGGGGAGGACAACGTGCACGGTCCCTCCAC
TTTGGGAATGTCCGCTGGGGGTGGCGAGGGCGCTTCTTCCGGCGTGGCGG
CAGGCGGGAGCGGCGGCACTGTCGGGGCAGAAGGGGCGAACGACGGCGGC
AGCGGGGCGGTTACCGGCGGCGCGGGGATGGAGGCATCGTCGTTGCAGGA
TGCGCAGGCACACAGCCGCGGGAACGGCCACCACGCGGCATCGTACCACG
CGCCTCCACACCACCAGCAGCACCGCGTGGGGCCGCCGTTGCACCACGCC
AACCGCCACTCGGCGCTGGATGACGGGCGGGGCCATTACCCGCATCGAGG
CGGCCCCGGCGGCGGGGGAGGCATTGGCGGCGCCGGCGCCGCAAAGCGCT
CTCCTGGCGCAGCAGCGATATGCCGCATACGAGCTGCAGCAGGCACA back to top
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