mRNA_P-wetherbeei_contig1297.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1297.3.1
Unique NamemRNA_P-wetherbeei_contig1297.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: D7FTS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS2_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 9.660e-80
Identity = 141/268 (52.61%), Postives = 188/268 (70.15%), Query Frame = 1
Query:    1 RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLRAEAKGAVEALQKQARALE 804
            RKE LPEY + +   E  WF+ E   ND ALR+MR+L+P  V  +T  QLEQ A+  GSL+PREL++ LKENRLLQW V HP+DIAR+NFL G HAHFFTN+DKYD+ E+RA+ AC+PA+FE+D DGRKAAWRA+F+ R + LVAQE+GD V   WDP+  ARR+ RLP L+    RR  Y YP   E   +++KLR R   L +K+A LA+++D+ +PEA+ E+A VL DTR  + + ++  ++LR  R EAK  V  L K+ + LE
Sbjct:  458 RKETLPEYVKHLSDEEAAWFEREADANDQALRSMRSLMPVGVTGLTVAQLEQAAIDGGSLFPRELSLRLKENRLLQWVVMHPEDIARSNFLQGAHAHFFTNMDKYDLVEMRAILACLPAKFEVDDDGRKAAWRAEFVQRAKGLVAQERGDTVSRGWDPEISARRQVRLPELSAGQTRREEYFYPTAVEVQARVDKLRERQCRLEAKRAELAEVRDKLLPEARQEHADVLEDTRHPFNKKTWKPEDLRRAREEAKSEVNRLSKEEKRLE 725          
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: D7FT01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT01_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 5.060e-77
Identity = 138/257 (53.70%), Postives = 181/257 (70.43%), Query Frame = 1
Query:    1 RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLRAEAKGAV 771
            RKEALPEY + + + E+ WF+ E + N+ ALR MR+L+P  V  +T  +LEQ A+  GSLYPR+L++ LKENRLL W V HP+DIAR+NFL G HAHFFTNLDKYD+ E+RAV AC+PA+FE+D DGRK AWRA+F+ R + LVAQE+GD V G WDPK  ARR+ RLP L+    RR  Y YP   +    ++KLR R   L +K+A LA ++D+ +PEA+ EY  VL DTR    R + + ++LR+ R EAK  V
Sbjct:  442 RKEALPEYIKHVAKEEKAWFEREAAANEKALRCMRSLIPVGVTGLTVSELEQRAVDGGSLYPRDLSLRLKENRLLHWTVMHPEDIARSNFLQGAHAHFFTNLDKYDLVEMRAVMACLPAKFEVDDDGRKTAWRAEFVQRAKGLVAQERGDTVSGGWDPKISARRQVRLPELSAGQARREEYFYPTAEKVQGTVDKLRERQRKLKAKQADLAKVRDKLLPEAREEYDYVLEDTRHPVNRVTRTPEDLRSAREEAKSEV 698          
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: D7FIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN4_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 5.810e-77
Identity = 146/270 (54.07%), Postives = 183/270 (67.78%), Query Frame = 1
Query:    1 RKEALPEYER--EIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLRAEAKGAVEALQKQARALE 804
            RKEALPEY +  E+  +E+ WF+ E   ND AL+  R L+P  V  +T  +LEQ AL  GSLYPREL + +KENRLL W VTHPDDIAR+NFL G+HAHFFTNLDKYD+ ELRA+ AC+PA+FE+D DGRKAAWR  F+ R Q+LVAQE+GD V G WDP+  ARR  +LP L PE  RR  Y YP  AE   +++KL+            LA +KD  +PEA+ EYA VL DTR    + ++  ++LR  R EAK  V+ L K+AR LE
Sbjct:  993 RKEALPEYGQGNEVADQEKAWFEREREANDLALQRTRKLIPVGVTRLTVAELEQHALDAGSLYPRELTLRIKENRLLHWVVTHPDDIARSNFLRGDHAHFFTNLDKYDLVELRAIMACLPAKFEVDADGRKAAWRELFLQRAQSLVAQERGDTVSGGWDPEIGARREVQLPQLTPEQTRRKEYFYPTAAEVEDRVQKLQEXXXXXXXXXXXLAHVKDELLPEAKEEYANVLEDTRHPANKEAFRPEDLRRARDEAKSEVDRLAKEARRLE 1262          
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: D7FMC3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC3_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 8.240e-52
Identity = 116/272 (42.65%), Postives = 158/272 (58.09%), Query Frame = 1
Query:    1 RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLRAEAKGAVEALQKQARALERELQ 816
            RKEALPE+ + +   E+ WFD E   N  ALR MR+L+P  V  +T  +LEQ+A+  GSLYPREL++ LK                                  YD+ E+RA+ AC+P +FE+D DGRKAAWRA+F+ R + L+AQE+GD V G WDP+  ARR+ RLP L+    RR  Y YP  AE   +++KLR R   L  K+  LA ++D  +PEA+ EY  VL D+R  + RA+   ++LR  R EAK  V  L K+A+ LE  L+
Sbjct:  550 RKEALPEHVKHVAGEEKAWFDREAGANAQALRRMRSLMPVGVTGLTLSELEQQAIDAGSLYPRELSLRLK----------------------------------YDLVEMRAILACLPDKFEVDDDGRKAAWRAEFVQRAKGLIAQERGDTVSGGWDPEISARRQVRLPELSAGQARREEYFYPTAAEVQARVDKLRERQRRLEVKRVDLAKVRDDLLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEGHLE 787          
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: A0A5D6XHR3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHR3_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.200e-49
Identity = 117/275 (42.55%), Postives = 157/275 (57.09%), Query Frame = 1
Query:    1 RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPAR----FELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLRAEAKGAVEALQKQARALEREL 813
            R+E   E   E+ +REQ+W  D  + NDAA R +R LVP DV  ++ E +   A   G LY  +LAI++K+NR L W VTH  D+AR NFL  E A  F N    DV ELRA++  +P      FE DRDGRKAAW+A F+  V ALVA+E+G+ V   WDP  +AR    LPPLA +    AVY YP  AE A ++ K  ++   L  K+  L  L+   +P A+ EY A+  D R +  + S+    L  LR +AK A++AL K   AL  E+
Sbjct:  648 RREQAKECAAELAQREQQWRLDHAADNDAARRLLRGLVPLDVQQLSVEAIIARAASAGVLYTFDLAIYVKQNRFLHWLVTHASDVARDNFLALESAAHFLNFAALDVFELRALSTALPLSAAGGFEFDRDGRKAAWKAQFLDHVYALVARERGESVKAGWDPVRRARGDVPLPPLADKQLLNAVYRYPSDAEIAARVAKFELQRERLELKREKLRGLEAALIPAAKAEYLAIAEDARSDALQRSFGRATLVRLRDDAKQALQALAKTRDALASEV 922          
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: A0A067C5X9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5X9_SAPPC)

HSP 1 Score: 171 bits (432), Expect = 1.820e-44
Identity = 105/271 (38.75%), Postives = 150/271 (55.35%), Query Frame = 1
Query:    1 RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLRAEAKGAVEALQKQARALEREL 813
            R+E   EY  E++R E+ W  +  + N   L  + +L+P  +A ++ +QL   A   G LY R+L  +LK+N+LLQW VTH  D AR NF+ G+ A  FTNL+ YD+TE+RA+   +P  FE D++GRKA WR  F+  ++ LV Q  G+ V   WDP   AR   +L PL+ +     VY YP   E   +L K   +   LA KKA L  L +  +P A+ EY AV  D R +    S+    L  LR EAK   ++L K+   L+ E+
Sbjct:  471 RRENAKEYSGEMKRLEEAWRANHSADNQVCLERLCSLIPDSIAAMSVDQLLDAAKQAGVLYTRDLVNYLKQNKLLQWVVTHEVDKARDNFISGDTAQCFTNLELYDITEMRAIYLALPDAFEFDKEGRKAEWRVGFIAHLKVLVQQYHGETVKAGWDPVKGARAEVKLKPLSDKQLLNPVYRYPTEDEIKQRLVKFETQAKRLAQKKARLQALVEHEIPLAKKEYHAVSDDCRSDDLIKSFGKPTLIRLRDEAKKIFQSLCKERDGLKSEI 741          
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: A0A485KYF6_9STRA (Aste57867_13222 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYF6_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.580e-44
Identity = 106/286 (37.06%), Postives = 152/286 (53.15%), Query Frame = 1
Query:    1 RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAV-------------LADTREEYFRASYSSDELRTLRAEAKGAVEALQKQARALERELQV 819
            R+E   EY  E+RR E  W     + N   L  + TL+P ++  ++ EQL + A   G LY R+LA +LK+N+LLQW VTH  D  R NF+ G+ A  FTN + YDVTE+R ++  +P  FE D+DGRKA WR  F+  ++ LV Q++G+ V   WDP    R   +L PL  +     +Y YP  AE   +LEK   +   LA KKA +  L ++ +P A+ EY AV             + D R E     +    L  LR E+K   ++L K+   L+ E+ V
Sbjct:  632 RREQAKEYPAEMRRLETEWKALHAAENQTCLERLCTLIPDNITAISVEQLLETAKAAGVLYTRDLANYLKQNKLLQWIVTHEKDKCRENFITGDTAQCFTNFESYDVTEMRGLSLALPDAFEFDKDGRKAEWRLAFVAHLKILVQQQRGECVKAGWDPVKGTRGDVKLKPLTEKQLLNPMYRYPTEAEIKLRLEKFETQAKRLAQKKARMTVLVNQEIPLAKKEYHAVAEGQSFIRPCVDLVPDARSEELLKQFGKPALIKLRDESKRVFQSLCKECDTLKGEIAV 917          
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: W4H9R6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9R6_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.630e-43
Identity = 103/273 (37.73%), Postives = 147/273 (53.85%), Query Frame = 1
Query:    1 RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLRAEAKGAVEALQKQARALERELQV 819
            R+E   EY  EIRR E  W     + N      + +L+P  +A+++ EQL   A   G LY R+LA +LK+N+ LQW VTH  D  R NF+ GE A  F N + +DVTE+R +   +P  FE D+DGRKA WR  F+  ++ LV Q++GD V   WDP    R   +L P + +     +Y YP   E   +LE+   +   LA KKA +  L ++ +P A+ EY AV  D R E     +    L  LR E+K   ++LQK+   L+ E+ V
Sbjct:  549 RREQAKEYPMEIRRMESEWKAMHAADNLVCYERLCSLIPDTIASMSVEQLLDAAKAAGVLYTRDLANYLKQNKFLQWIVTHDRDKCRDNFITGEWAQCFANFEAFDVTEMRGLFVALPDNFEFDKDGRKAEWREAFVAHLKMLVQQQRGDCVKAGWDPVKGTRAEVKLKPPSDKHLLNPMYRYPTEVEIKQRLERFETQAKRLAQKKARMQVLTNQDIPMAKKEYHAVAEDARSEDLLRQFGKPALIKLRDESKKVYQSLQKEYDTLKGEVAV 821          
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: A0A6G0XYA4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYA4_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.000e-43
Identity = 100/273 (36.63%), Postives = 148/273 (54.21%), Query Frame = 1
Query:    1 RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLRAEAKGAVEALQKQARALERELQV 819
            R+E   E+  E++R E  W       N A    + +L+P  + T++ EQL   A   G LY R+LA +LK+N+ LQW VTH  D +R NF+ G+ A  FTN + YD+TE+R +   +P  FE D+DGRKA WR  F+ +++ LV Q++G+ V   WDP   AR   +L  L  +     +Y YP  +E   +LE+   +   LA KKA +  L ++ +P A+ EY AV  D R E     +    L  LR E+K    +L K+   L+ E+ V
Sbjct:  542 RREQAKEFPVEMKRLEVEWKAQHAMENHACFERLCSLIPETITTMSVEQLVDGAKAGGVLYTRDLANYLKQNKFLQWIVTHDKDKSRENFITGDSAQCFTNFEAYDITEMRGLFVALPEAFEFDKDGRKAEWRLAFVAQLKLLVQQQRGECVKAGWDPAKGARAEVKLKSLTEKQLVNPMYRYPTESEIQQRLERFETQAKRLAQKKARMQVLINQEIPLAKKEYHAVAEDARSEELLKQFGKPALIKLRDESKKVYHSLCKECDTLKGEIAV 814          
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Match: A0A1V9ZQ70_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ70_9STRA)

HSP 1 Score: 164 bits (415), Expect = 3.440e-42
Identity = 101/260 (38.85%), Postives = 141/260 (54.23%), Query Frame = 1
Query:    1 RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQLEQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFTNLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGDEVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRDAALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLRAEAKGAVEAL 780
            R+E   EY  E+R+ E  W    L  N   L  + +L+P  +A ++ E L       G LY R+LA +LK+N+LLQW VTH  D AR NF+ G+ A  FTN++ YD+TELRA+   +P  FE D++GRK+ WR +F++ ++ LV Q+ GD V  +     K R   +L PL  +     VY YP   E   +L K   +   LA KK+ L  L D  +P A+ EY AV  D R E    S+    L  LR EAK   ++L
Sbjct:  466 RRENAKEYPAELRKVEAEWRAKHLLDNQICLERLCSLIPESIAAMSIEMLLDATKAMGVLYTRDLANYLKQNKLLQWVVTHEKDKARENFITGDTAQCFTNIEMYDITELRAIYLALPENFEFDKEGRKSEWRQNFVSHLKVLVQQQNGDSVTANL---VKTRAEVKLKPLNDKQLLNPVYRYPTEDEIKQRLLKFETQAKRLAQKKSRLQALNDNEIPLAKKEYHAVSDDCRSENLIKSFGKATLIRLRDEAKKIFQSL 722          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1297.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FTS2_ECTSI9.660e-8052.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FT01_ECTSI5.060e-7753.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FIN4_ECTSI5.810e-7754.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMC3_ECTSI8.240e-5242.65Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A5D6XHR3_9STRA2.200e-4942.55Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A067C5X9_SAPPC1.820e-4438.75Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485KYF6_9STRA3.580e-4437.06Aste57867_13222 protein n=1 Tax=Aphanomyces stella... [more]
W4H9R6_9STRA1.630e-4337.73Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A6G0XYA4_9STRA3.000e-4336.63Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9ZQ70_9STRA3.440e-4238.85Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1297contigP-wetherbeei_contig1297:5016..7025 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FMB6
Model size828
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue5.62e-82
EggNOG OGs2C7IG@1|root,2QWI0@2759|Eukaryota
Cds size828
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185968.588337-CDS-P-wetherbeei_contig1297:5015..52011683185968.588337-CDS-P-wetherbeei_contig1297:5015..5201Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1297 5016..5201 -
1683185968.6040473-CDS-P-wetherbeei_contig1297:5416..56051683185968.6040473-CDS-P-wetherbeei_contig1297:5416..5605Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1297 5417..5605 -
1683185968.615984-CDS-P-wetherbeei_contig1297:5851..59921683185968.615984-CDS-P-wetherbeei_contig1297:5851..5992Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1297 5852..5992 -
1683185968.624603-CDS-P-wetherbeei_contig1297:6409..65621683185968.624603-CDS-P-wetherbeei_contig1297:6409..6562Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1297 6410..6562 -
1683185968.6396463-CDS-P-wetherbeei_contig1297:6866..70251683185968.6396463-CDS-P-wetherbeei_contig1297:6866..7025Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1297 6867..7025 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1297.3.1prot_P-wetherbeei_contig1297.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1297 5016..7025 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1297.3.1

>prot_P-wetherbeei_contig1297.3.1 ID=prot_P-wetherbeei_contig1297.3.1|Name=mRNA_P-wetherbeei_contig1297.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp
RKEALPEYEREIRRREQRWFDDELSRNDAALRTMRTLVPADVATVTREQL
EQEALVRGSLYPRELAIFLKENRLLQWCVTHPDDIARANFLVGEHAHFFT
NLDKYDVTELRAVAACIPARFELDRDGRKAAWRADFMTRVQALVAQEKGD
EVLGSWDPKTKARRRCRLPPLAPELRRRAVYSYPRPAEAATKLEKLRVRD
AALASKKATLADLKDRAVPEAQLEYAAVLADTREEYFRASYSSDELRTLR
AEAKGAVEALQKQARALERELQVRRR
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mRNA from alignment at P-wetherbeei_contig1297:5016..7025-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1297.3.1 ID=mRNA_P-wetherbeei_contig1297.3.1|Name=mRNA_P-wetherbeei_contig1297.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2010bp|location=Sequence derived from alignment at P-wetherbeei_contig1297:5016..7025- (Phaeothamnion wetherbeei SAG_119_79)
AGGAAGGAGGCTCTGCCAGAGTACGAGCGGGAGATTCGGCGGCGCGAGCA GCGGTGGTTCGATGATGAGCTATCGCGAAACGATGCCGCGCTGCGCACCA TGCGGACCCTCGTGCCCGCCGACGTCGCCACTGTCACGCGCGAGCAGCTC GAGCAAGAGGTGAGGCAGGAAGGCGTCCTTATTCCGTGGAAGAAAATCGT ATTTTCCCGGAAGAGGAAAGATGTTTTCTTGGCTTAGTGGCACGTTGCTT TCGCTGGCGTTGCATTGCTGTGCTGCCCCGTTTAGCGCCTCCGCCAGCCC GCCGCTGCGGCTGGCAGCCGCGCCAACCTTTCTTGTCAGCTTCCATGCCT TCTGTTTTAGTTGCGGCTCTGCGCATGGCTGCCACAACTTCCACGGTTCT GCAACGGTGTGCTTTTTCTCCACTGTTTTGTGCTTCCCTTTCTTTGGTTG TCAACGACGACAGGCGCTGGTTCGGGGTTCGCTGTACCCGCGGGAACTGG CCATCTTCCTCAAGGAGAACCGGCTGCTGCAGTGGTGCGTCACCCATCCC GACGACATCGCCCGAGCCAACTTCCTCGTCGGGGAGCACGCCCACTTCTT CACCAACCTCGACAAGGTAAGACAAGAGAGAGAAGAAGATCAGGGAGGAG GCAGGGGAAGCGGAATCTGGCGGTTTTGGCAGTTGTTACTCGGCATGCAC AGCAAGCAGGTGGCTGCGATGGCTGGGGCGGGTGGAGATGCGAAACGAAA TGTTCCAAGCTCCACTTAGAGTCGAGCTGTCCCTTCTCCCGACCTGTATC CCACCGCGTTTGGCTAGTGTTCTGCTCCCGTCGTATTTTCCTCTCCTGTT GCCGCCTCCAACGAGACCGTTCCGACTCTATCGACGCCGCCCTATGGCCA TCGCCGCCACCGCCACTGCTCTTTCTTCCTTTCCCTCCTTTCCACTCCCT TGCCTCTGGCTCTGTTGCCCCTCTATTGTTGCCGGCCGTGCCCTTCTCGT TCGGGACGCCTCTCTCTGTGTGTGCATTTGCAGTACGACGTGACGGAGCT GCGGGCGGTGGCAGCATGCATCCCGGCCCGCTTTGAGCTCGACCGCGACG GCCGCAAGGCGGCGTGGCGGGCCGATTTCATGACCCGCGTCCAGGCCCTC GTGGCGCAGGAGAAAGGGGACGAGGTGAGAAAAAAGACTGCTGCAGTGAT GTGTGGTGCTTTCCGCGTTGACTTGCTTATTTTTCCGGACGAGGATGCGG GGCTACCATTCAGCATGCCATTGTTCGGTCGAATGGATTCGACTGCGGCA ATAGATTCATTTCAACACTCATTGCACACTTCTGCCTGCCTTGATGCCCA ATCAACCTTCACGTTTGAATGCTGTCTTTTCGTGGAACGCGGGAAAATCG TTCCAAAATCGCCATGCCAGGTGCTCGGAAGCTGGGATCCCAAAACGAAG GCTCGTCGGCGGTGCCGCCTGCCGCCGCTGGCGCCGGAGTTGCGGCGGCG CGCCGTCTACTCGTATCCGCGGCCCGCCGAGGCGGCGACCAAGCTGGAGA AGTTGCGGGTGAGGGACGCTGCGCTGGCGAGCAAGAAGGCTACGCTCGCC GACCTCAAGGTGGGATGGAGGCGAAAGGAGGAAGAGGGAAATTTACTCCA GCCGCTTTATGCAAGAATGGCAGCGGTGGTACGTGGCGGCTGTCATGCCT ACCAAAGGCAAGAACTATAAATCGTATTTTGCTCTTTCCAATGAGTCCTT CTCGGTTTCCTAACCCAGTACTTTTAACCGCTCGTTAATTTTCACAACCA AACCGGTCAATCCGGCTGGGCCAGGACCGCGCGGTGCCCGAGGCGCAGCT GGAGTACGCAGCGGTGCTGGCCGACACGCGCGAGGAGTACTTCCGGGCAT CGTACTCATCGGACGAGCTCCGAACCCTCCGGGCCGAGGCCAAGGGCGCC GTCGAGGCGCTGCAGAAGCAGGCCCGCGCGCTCGAGAGGGAGCTGCAGGT GAGGAGACGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1297:5016..7025-

>mRNA_P-wetherbeei_contig1297.3.1 ID=mRNA_P-wetherbeei_contig1297.3.1|Name=mRNA_P-wetherbeei_contig1297.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig1297:5016..7025- (Phaeothamnion wetherbeei SAG_119_79)
AGGAAGGAGGCTCTGCCAGAGTACGAGCGGGAGATTCGGCGGCGCGAGCA
GCGGTGGTTCGATGATGAGCTATCGCGAAACGATGCCGCGCTGCGCACCA
TGCGGACCCTCGTGCCCGCCGACGTCGCCACTGTCACGCGCGAGCAGCTC
GAGCAAGAGGCGCTGGTTCGGGGTTCGCTGTACCCGCGGGAACTGGCCAT
CTTCCTCAAGGAGAACCGGCTGCTGCAGTGGTGCGTCACCCATCCCGACG
ACATCGCCCGAGCCAACTTCCTCGTCGGGGAGCACGCCCACTTCTTCACC
AACCTCGACAAGTACGACGTGACGGAGCTGCGGGCGGTGGCAGCATGCAT
CCCGGCCCGCTTTGAGCTCGACCGCGACGGCCGCAAGGCGGCGTGGCGGG
CCGATTTCATGACCCGCGTCCAGGCCCTCGTGGCGCAGGAGAAAGGGGAC
GAGGTGCTCGGAAGCTGGGATCCCAAAACGAAGGCTCGTCGGCGGTGCCG
CCTGCCGCCGCTGGCGCCGGAGTTGCGGCGGCGCGCCGTCTACTCGTATC
CGCGGCCCGCCGAGGCGGCGACCAAGCTGGAGAAGTTGCGGGTGAGGGAC
GCTGCGCTGGCGAGCAAGAAGGCTACGCTCGCCGACCTCAAGGACCGCGC
GGTGCCCGAGGCGCAGCTGGAGTACGCAGCGGTGCTGGCCGACACGCGCG
AGGAGTACTTCCGGGCATCGTACTCATCGGACGAGCTCCGAACCCTCCGG
GCCGAGGCCAAGGGCGCCGTCGAGGCGCTGCAGAAGCAGGCCCGCGCGCT
CGAGAGGGAGCTGCAGGTGAGGAGACGG
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