mRNA_P-wetherbeei_contig12959.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12959.2.1
Unique NamemRNA_P-wetherbeei_contig12959.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A7C9KQH5_9PROT (Amino acid permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9KQH5_9PROT)

HSP 1 Score: 300 bits (768), Expect = 4.430e-95
Identity = 195/402 (48.51%), Postives = 255/402 (63.43%), Query Frame = 1
Query:    7 PSADKARLKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLSFLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIVAVGILAAASIARGCAAYLTGLLPVIPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVIAAG------LYQTHAYTPPAFVFAPDAIASGAFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAVNVAPLDVLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAAQL 1194
            PSA  A L+R LGL +LV YG+G I+GAGIYVL G VAG AG GAPL+F+ AG+LA  T +S+AELSAR+PEA+G AAY    FG + LSR +GFA+VAVG+    S+A G   Y+   + V P+ A  A IV+LFT VA + V +++  AA MTVVEIGGL  V A G      L +      P  + A  A++SG F+A FAFLGFE + NMAEET  P++TLPRA+LLS+ +AT +Y ++        PL  L+ S  PL  ++  + +    L  +IA+ A  NG+L+ ++M+ R++YGMA RGWLP  L  V P T  P+R T+I G + +A     D   L   TS V L VF + NLAL RLHR +PRPDL IRA  W PPL A  +A L+A QL
Sbjct:   26 PSAP-ATLRRVLGLWILVFYGLGSIVGAGIYVLIGAVAGVAGYGAPLAFVGAGILAGLTGLSYAELSARYPEAAGAAAYVQEGFGRAGLSRLVGFAVVAVGLFLTGSLAHGVVGYINEFVAVPPLPAALA-IVVLFTVVAGVAVRHTLMLAAAMTVVEIGGLVIVAAVGAPALARLPEVAPLMVPGDITAVLAVSSGIFLAFFAFLGFEDIVNMAEETRAPERTLPRAVLLSIVLATVIYAVIXXXXXXXXPLADLAASRAPLELIMGRAEWVPRGLLSVIAIIAIPNGILVTLVMLGRILYGMARRGWLPTALGVVNPWTRTPLRTTVIAGGLAVAFTAAVDFIGLVTLTSAVNLCVFTIVNLALWRLHRTQPRPDLPIRAWVWCPPLAAGFSAALIALQL 425          
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A2N6AYV6_9HYPH (Amino acid permease n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2N6AYV6_9HYPH)

HSP 1 Score: 280 bits (715), Expect = 1.730e-87
Identity = 181/398 (45.48%), Postives = 249/398 (62.56%), Query Frame = 1
Query:   28 LKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLSFLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIVAVGILAAASIARGCAAYLTGLLPVIPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVIAAG--------LYQTHAYTPPAFVFAPDAIASGAFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAVNVAPLDVLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAAQLF 1197
            LKRS+ L +LVLYG+GV IGAGIYVL G+VA  AG GAPLSF+ A   A  TA+SF+EL+ R+PE++G+AAY  + + + L+   IG A+ A G+++AA++A G A YL  L+P IP A    +IV+L   VA   +A SV  A +MT+VE GGL  +IAAG        L +       AF  AP  IA+GA IA FAF+GFE + N+ EE H+P KT+PRAILL+L  AT +Y+ VA +AV V P DVL+ +P PL  V   S    AV+   IA+ A  NG+L++I+M SR++YG+A RGW+P  L+ V PRT  P+RAT++             + +LAA TS + L++F++ N AL+ + RRE     T   P  +P  GA+  A L+   L 
Sbjct:    4 LKRSISLTMLVLYGLGVTIGAGIYVLIGEVAALAGYGAPLSFVAAAAAAGLTALSFSELATRYPESAGEAAYTEAGYRSPLMGTLIGLAVAAAGVISAAAVAIGAARYLATLVP-IPPALAVIVIVVLLGAVAVRGIAESVAFAGLMTIVEAGGLI-LIAAGAVIADPDILAKLGDTMSAAFSTAPMPIAAGAVIAFFAFIGFEDMVNVIEEVHEPQKTVPRAILLTLFFATLIYLSVAAIAVTVIPPDVLAKAPAPLAAVAEASGLVPAVVISSIAVAAGVNGILVQIVMASRVLYGIARRGWIPAWLSSVNPRTRTPLRATVLVXXXXXXXXXXLPIEKLAAGTSVLALTIFLIVNGALILIKRREGTERATFHVPIAVPVAGAVITAALIVVALL 399          
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A2A4TUB6_9PROT (Amino acid permease n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A4TUB6_9PROT)

HSP 1 Score: 278 bits (711), Expect = 8.020e-87
Identity = 179/404 (44.31%), Postives = 259/404 (64.11%), Query Frame = 1
Query:   10 SADKARLKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLSFLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIVAVGILAAASIARGCAAYLTGLLPV-IPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVIAAG------LYQTHAYTPPAFVFAPDAIASGAFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAV-NVAPLDVLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAAQLF 1197
            +A   +LKR+LGL  L LYG+G+IIGAGIYVL G VAG AGM APL+FL+AG+LAA T +S+AEL  R P+A+G A YA   F +SL  R  G+A + V +++AAS+ RG A YL  ++ + +P+A+G   ++++FT +AC  V  SV  A+ MTV+EI GL  VI  G      L Q  +   P    A   +  G F+A FAF GFEA+ +MAEET +  +TLPRA++LS+G++  LY++V  ++V  + P D+ +++    L V   SP  N  LF IIA+ AT NGVLIEI++++R+ YGMA+R WLP  L+ V  +   P+ AT+  G+I+  L   FD   LA  TS ++L VF++ N++L+ L RR     L++  P W+P  GA+ +  +L A+LF
Sbjct:    2 TAQMPKLKRTLGLVSLTLYGLGIIIGAGIYVLVGAVAGQAGMAAPLAFLIAGILAAFTGLSYAELGQRLPDAAGAAVYAQKGFQSSLAGRLTGYATLLVAVVSAASVTRGGAGYLLAIVDIPLPLASGA--VIIIFTALACWGVKESVYIASSMTVLEICGLGIVIFIGADALGDLPQRISEMWPKETSAWIGVMGGTFLAFFAFSGFEAIVHMAEETENVKRTLPRAVVLSIGLSALLYMLVISISVLTILPTDLAASNAPLCLVVDCDSP--NMALFPIIAIIATLNGVLIEIVLMARITYGMANRKWLPGWLSGVHAKRQTPMLATVCVGMIVFVLATTFDFEPLARVTSALILIVFVIVNMSLVMLKRRHEPVKLSLEIPAWVPIFGALSSLAVLIAELF 401          
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A2S8EUV9_9RHOB (Amino acid permease n=1 Tax=Rhodobacteraceae bacterium WD3A24 TaxID=2086263 RepID=A0A2S8EUV9_9RHOB)

HSP 1 Score: 265 bits (676), Expect = 1.080e-81
Identity = 184/395 (46.58%), Postives = 244/395 (61.77%), Query Frame = 1
Query:   28 LKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLSFLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIVAVGILAAASIARGCAAYLTGL--LPVIPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVIAAGLYQTHA--YTPPAFVFAPD--AIASGAFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAVNVAPLDVLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITG--VILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAA 1188
            L+R +G GLL  YGVGV++GAGIYVLTG VAGAAG+ APL+FL+AGL+AAP+A+S+AEL AR PEA+G+AAY     G   L+  +G AIV  G ++AA++ RG   YL  +  LP +P+A    L + L   VA + V  S+T AA+ T++E+GGL  VI AG     A  +  PA   APD   +A GA +A FAF+GFE + NMAEE   P++T+PRAIL +L I   LY +V+  AV   P +VL  S  PL  V   +  G A    +IA+ A  NGVL  I+M +R+++G+  R        H  PR   PVRATL+ G  V ++ALV+P  VAELA  TS++LL VF + N AL+ L RR P  +   R P W+P  G   A   LAA
Sbjct:    5 LRRRVGPGLLTAYGVGVMVGAGIYVLTGAVAGAAGVWAPLAFLIAGLVAAPSALSYAELGARIPEAAGEAAYIEQGLGLRWLAVLVGLAIVVAGTVSAAAVLRGGTGYLISVVDLPFMPVAIALGLALTL---VAAIGVLESLTVAAVFTLIEVGGLLLVIGAGAVAVPAPDWQAPA---APDWSGVALGATLAFFAFIGFEDMVNMAEEVVAPERTMPRAILAALAITAALYALVSLAAVRAVPPEVLGQSERPLALVWEQATGGGAAFLSLIAVAAALNGVLAMIIMAARILFGLGRRSARLAVFHHAHPRWGTPVRATLLLGGLVSVIALVLP--VAELAQITSSILLVVFALVNAALIALKRRVP--EAPFRVPAWVPWAGLAAALAALAA 389          
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A353XWM2_9GAMM (Amino acid permease n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A353XWM2_9GAMM)

HSP 1 Score: 265 bits (676), Expect = 1.590e-81
Identity = 185/406 (45.57%), Postives = 246/406 (60.59%), Query Frame = 1
Query:    7 PSADKARLKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLSFLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIVAVGILAAASIARGCAAYLTGLLPVIPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVIAAGLYQTHAYTPPAFVFAP--------DAIASGAFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAV-NVAPLDVLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAAQLF 1197
            PS   A LKRSLG  LL+LYGVG I+GAGIYVL G+VA  AG   PLSF+LA  +AA +A ++AELSAR+P A+G+A Y H  F  + LS   G  I   GIL+AA+IARG   YL   +      A  AL++ML T VA   +A SV  AA+ T++EI GL  +I  G  Q     P      P          I  GAF+A +AF+GFE + N+AEE  +P+  +PRAIL +L I T LY +V+ VAV N++P   L+ S  PL DV   +     V+  +I+L A  NG LI+I+M SR+ YGM+ RGWLP  L  V  RTH PV ATL+   +++ L + F + +LAA+TS ++LSVF++ NLAL+R+    P P      P W+P +GA G+  LL AQL 
Sbjct:    2 PSIPPASLKRSLGFWLLLLYGVGNILGAGIYVLVGKVAAQAGYFVPLSFMLAAFVAAFSAFTYAELSARYPFAAGEAVYLHHGFDMTWLSSATGILIAMAGILSAATIARGFVGYLQLFVEAPQWLAIVALLLMLGT-VAIWGIAESVKVAALFTLLEIIGLLLIITTGSAQLERL-PGIIENLPALNQWHLWPGIFLGAFLAFYAFIGFEDMVNVAEEVREPEINMPRAILWALIITTLLYAMVSVVAVVNLSPQQ-LAASEAPLADVYAAATGRRPVVISLISLFAIVNGALIQIIMASRIFYGMSRRGWLPAILGQVSQRTHTPVTATLLVTSLIMILALWFPLVKLAASTSYLILSVFLLVNLALLRIRANYPLPQNVKGYPVWVPLMGAAGSLFLLVAQLI 404          
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A7X2KFD4_9PROT (Amino acid permease n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2KFD4_9PROT)

HSP 1 Score: 260 bits (665), Expect = 6.830e-80
Identity = 177/403 (43.92%), Postives = 248/403 (61.54%), Query Frame = 1
Query:   28 LKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLSFLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIVAVGILAAASIARGCAAYLTGLLPVIPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVIAAGL-------YQTHAYTP-----PAFVFAPDAIASGAFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAV-NVAPLDV-LSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAAQL 1194
            L+R LGL LLVLYGVGV +GAGIYVL G  A  +GM AP++FL++  + + TA SFAELSAR P ++G+AAY  + FG+ +LS   G  +V  GI+++A+I  G   Y++    + P+    A +V+    VAC  +  SV  AA+ TV+E+GGL  ++ AGL        +     P     PA V     I S A IA FAF+GFE + N+AEET DP + +PRAI L+L I T +Y  V YVAV  V+P ++ +S +P  ++   VGS     V+ GI A+ AT N ++I+I+M SR++YG+ADRG LP  LA + P T  PV AT++  VI+L L + F+V  LAA TS + L+VF + NL+L+RL  RE  P + +  P W+P  G I   GLLA  +
Sbjct:    7 LRRRLGLTLLVLYGVGVTVGAGIYVLIGAAARESGMNAPIAFLVSAFVMSFTAASFAELSARFPVSAGEAAYVQAGFGSDILSLVTGALVVGAGIVSSAAITVGSVGYISEFTSLSPVLLKTA-VVLAVCAVACWGILESVVLAAVFTVIEVGGLVVIVIAGLAADPGMILRISEVLPSVGDMPALV----GIGSAALIAFFAFIGFEDMVNVAEETVDPVRNMPRAIALTLFITTLVYFCVVYVAVMTVSPAELGVSEAPLAVVAARVGS-ISPVVITGI-AIMATLNTIIIQIIMASRVIYGVADRGQLPGFLARINPLTRTPVIATILVSVIVLVLALGFNVERLAATTSQIALTVFTIVNLSLIRLKMRENAPFVPLNLPMWVPVSGVICCLGLLAVDI 402          
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A0B5DWT7_9RHOB (Amino acid permease n=1 Tax=Celeribacter indicus TaxID=1208324 RepID=A0A0B5DWT7_9RHOB)

HSP 1 Score: 259 bits (663), Expect = 9.590e-80
Identity = 179/397 (45.09%), Postives = 240/397 (60.45%), Query Frame = 1
Query:   28 LKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLSFLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIVAVGILAAASIARGCAAYLTGLLPVIPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVIAAGLYQTHAYTPPAFVFAPDAIASG----------AFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAVNVAPLDVLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAA 1188
            L+R +G GLL  YGVGV++GA IYVL G VA  AG+ AP++FLLAGL+AAP+A+S+AELS R PEA+G+AAY  +  G+  L   +G AIVA G L+AA++ RG A YLTG LPV P     A + +L   VA   V  S+  AA+ T +E+ GL  V+ AG      ++ PA   +PD +A            A +A FAF+GFE + NMAEE   P++TLP AIL SLGI T LYV+V   AV V PL+ L+ S  PL  +V  +  G   L   IA+ A  NGVL +I+M +R+++G+  RG          PR   PV ATL+ G  ++A  +   V++LA  TS +LL VF + N +L+RL RR P    T+  PRWIP +G + A   LAA
Sbjct:    5 LRRRIGPGLLTAYGVGVMVGAXIYVLVGAVAAEAGLYAPVAFLLAGLIAAPSALSYAELSTRMPEAAGEAAYVEAGTGSRALGLIVGLAIVAGGTLSAAAVLRGGAGYLTGFLPV-PFDLAVAGLGLLLVAVAVAGVLESLALAALFTAIEVAGLALVVWAG------WSAPA---SPDWVAGAPPYLPGIGMAATLAFFAFIGFEDIVNMAEEVKRPERTLPIAILASLGITTLLYVLVTVAAVRVVPLEALAFSEQPLA-LVFEAGGGPLALLSAIAVAAALNGVLAQIVMAARVLFGLGKRGGALGLFHRAHPRFGTPVLATLLIGAAVIAAALLLPVSDLAGVTSTILLVVFTLVNASLLRLKRRRPEAPFTV--PRWIPAVGLVFALLALAA 388          
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A3D3UGH4_9PROT (Uncharacterized protein (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UGH4_9PROT)

HSP 1 Score: 256 bits (653), Expect = 2.090e-79
Identity = 164/306 (53.59%), Postives = 190/306 (62.09%), Query Frame = 1
Query:  301 AVGILAAASIARGCAAYLTGLLPVIPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVIAAG---LYQTHAYTPPA----FVFAPDAIASGAFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAVNVAPLDVLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAAQLF 1197
            AVGILAAASIARG AAYL  L P IP+  G A +V+LFTG+ACL V  SV  AA+MT  E+ GL YVI AG   ++QT    P +       AP  IA+GAF                       + LP AI L+L I+T                    +SPTPL DVV  SP GNA +FG +AL ATANGVLIEILMV+R+ YGMA RGWLP   A VWPR+  PVR TL+ G I+L L +PFDV ELAA TSNVLLS+F++ NLALMRL    PR DL IRAPRW+PPLGA GAA LLAAQ  
Sbjct:    1 AVGILAAASIARGAAAYLGDLAP-IPLPLGAAGLVILFTGIACLGVRQSVGIAAVMTFAELLGLAYVIIAGGHQVWQTGTVVPLSELADLTAAPAGIAAGAFXXXXXXXXXXXXXXXXXXXXXAYRALPLAIFLALAISTXXXXXXXXXXXXXXXXXXXVSSPTPLRDVVASSPIGNAEIFGSVALIATANGVLIEILMVARVSYGMAHRGWLPAWFAAVWPRSRTPVRTTLVAGAIVLLLAVPFDVGELAAMTSNVLLSLFVIVNLALMRLQHVAPRDDLPIRAPRWLPPLGAAGAAALLAAQFL 305          
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A1B4V605_9GAMM (Amino acid permease n=2 Tax=Sulfurifustis variabilis TaxID=1675686 RepID=A0A1B4V605_9GAMM)

HSP 1 Score: 257 bits (657), Expect = 1.350e-78
Identity = 171/401 (42.64%), Postives = 240/401 (59.85%), Query Frame = 1
Query:   13 ADKARLKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLSFLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIVAVGILAAASIARGCAAYLTGLLPVIPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVI---AAGLYQTHA----YTPPAFVFAPDAIASGAFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAVNVAPLDVLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAAQL 1194
            A    LKRSL LGLL LYG+G I+GAGIYVL G+VA  AGM APL+F++A LLA  T +S+AELSAR P+++G+A Y         LS  +G  IV  G+++AA+IA G   YL   + V P      ++V+L   +A   +  SV AA+++T+VE+GGL ++I    AGL    A      PP        I  GAF+A +AF+GFE + N+AEE  +P +TLP AIL+++ ++T LY++VA VAV   P   L+ S  PL  +   +      L  +++L A  NG LI+I+M SR++YGM+  GWLP  L  V P T  P+ AT + G  +L L +   +  LA ATS ++L VF + NLAL+R+ RR+PRP      P  IP  G + + G +A QL
Sbjct:    6 AGAIALKRSLTLGLLTLYGLGTILGAGIYVLVGRVAATAGMYAPLAFVIAALLAGLTGLSYAELSARLPKSAGEAVYVQEGLRRRWLSVVVGLLIVLTGVVSAATIANGFVGYLHVFVAV-PDGLAVVVLVLLLGALAAWGITESVVAASLVTLVELGGLAFIIYIGGAGLVDLPARWPELVPPPAAGVWHGILLGAFLAFYAFIGFEDMVNVAEEVKEPGRTLPLAILIAIVVSTVLYLLVALVAVLALPPAELAASRAPLALIYERATGSPPTLIALVSLFAVVNGALIQIIMSSRVLYGMSREGWLPEALGKVSPVTRTPLAATALVGATVLVLAVALPIVTLAKATSLIVLIVFALVNLALVRIKRRDPRPAGVRVFPLAIPLAGFLASTGFVALQL 405          
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Match: A0A3D5AYD6_9GAMM (Amino acid permease n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5AYD6_9GAMM)

HSP 1 Score: 256 bits (654), Expect = 2.930e-78
Identity = 167/396 (42.17%), Postives = 238/396 (60.10%), Query Frame = 1
Query:   28 LKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLSFLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIVAVGILAAASIARGCAAYLTGLLPVIPIAAGGALIVMLFTGVACLTVANSVTAAAIMTVVEIGGLFYVIAAG-------LYQTHAYTPPAFVFAPDAIASGAFIAMFAFLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAVNVAPLDVLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGMADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNVLLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAAQL 1194
            LKRSL L LL  YG+G I+GAGIYVL  +VAG AG+ APLSFLLA LLA  T  ++AELSAR+P+++G+A Y         LS  +GF I+  G+++AA+I  G   YL  +  +IP A    L+V+L   +A   ++ SV AA I+T+VE+GGL +++  G         + H   PPA       I  GAF+A +AF+GFE + N+AEE  DP + LPRAILL+L  A+ LY++VA VAV   P   L+ +  PL  +   +      +  +I+L A  NG LI+I+M SR++YGM+  GW+P+ L  V  RT  P  AT++   ++L L + F + +LA  TS V+L VF + NL+L+R+ RR+P P      P WIP  G +  +  +  QL
Sbjct:    6 LKRSLSLALLTFYGLGTIVGAGIYVLVAKVAGYAGLYAPLSFLLAALLATFTGFAYAELSARYPKSAGEAVYVQEGLRRRELSLLVGFLIIVTGVVSAATIVNGFVGYLH-VFVMIPDALAITLVVLLLGALALWGISESVLAATIITLVEVGGLLFIVYVGGDSLATLPARWHELLPPADAAIWQGILLGAFLAFYAFIGFEDIVNVAEEVRDPVRVLPRAILLALAAASVLYILVALVAVLALPPAELAETRAPLALIYERTTGSPPTVISLISLFAIINGALIQIVMGSRVLYGMSREGWIPNWLGRVHARTQTPHFATVLMTGVILVLALWFPLVQLAKFTSFVILVVFALINLSLLRIKRRDPNPAGVRTYPVWIPWAGFLSTSAFVLYQL 400          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12959.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C9KQH5_9PROT4.430e-9548.51Amino acid permease n=1 Tax=Alphaproteobacteria ba... [more]
A0A2N6AYV6_9HYPH1.730e-8745.48Amino acid permease n=1 Tax=Hyphomicrobiales bacte... [more]
A0A2A4TUB6_9PROT8.020e-8744.31Amino acid permease n=1 Tax=Rhodospirillaceae bact... [more]
A0A2S8EUV9_9RHOB1.080e-8146.58Amino acid permease n=1 Tax=Rhodobacteraceae bacte... [more]
A0A353XWM2_9GAMM1.590e-8145.57Amino acid permease n=1 Tax=Gammaproteobacteria ba... [more]
A0A7X2KFD4_9PROT6.830e-8043.92Amino acid permease n=1 Tax=Alphaproteobacteria ba... [more]
A0A0B5DWT7_9RHOB9.590e-8045.09Amino acid permease n=1 Tax=Celeribacter indicus T... [more]
A0A3D3UGH4_9PROT2.090e-7953.59Uncharacterized protein (Fragment) n=2 Tax=Alphapr... [more]
A0A1B4V605_9GAMM1.350e-7842.64Amino acid permease n=2 Tax=Sulfurifustis variabil... [more]
A0A3D5AYD6_9GAMM2.930e-7842.17Amino acid permease n=1 Tax=Gammaproteobacteria ba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12959contigP-wetherbeei_contig12959:665..1864 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_0665
PFAMsAA_permease_2
Model size1200
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03294
KEGG TC2.A.3.2
Hectar predicted targeting categorysignal anchor
Exons1
Evalue2.39e-78
EggNOG OGsCOG0531@1|root,COG0531@2|Bacteria,1MXNJ@1224|Proteobacteria,2TRNX@28211|Alphaproteobacteria
Descriptionamino acid
Cds size1200
COG categoryE
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185968.0233243-CDS-P-wetherbeei_contig12959:664..18641683185968.0233243-CDS-P-wetherbeei_contig12959:664..1864Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12959 665..1864 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12959.2.1prot_P-wetherbeei_contig12959.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12959 665..1864 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12959.2.1

>prot_P-wetherbeei_contig12959.2.1 ID=prot_P-wetherbeei_contig12959.2.1|Name=mRNA_P-wetherbeei_contig12959.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=400bp
MQPSADKARLKRSLGLGLLVLYGVGVIIGAGIYVLTGQVAGAAGMGAPLS
FLLAGLLAAPTAISFAELSARHPEASGQAAYAHSAFGNSLLSRCIGFAIV
AVGILAAASIARGCAAYLTGLLPVIPIAAGGALIVMLFTGVACLTVANSV
TAAAIMTVVEIGGLFYVIAAGLYQTHAYTPPAFVFAPDAIASGAFIAMFA
FLGFEALANMAEETHDPDKTLPRAILLSLGIATTLYVIVAYVAVNVAPLD
VLSNSPTPLLDVVVGSPFGNAVLFGIIALTATANGVLIEILMVSRMMYGM
ADRGWLPHQLAHVWPRTHAPVRATLITGVILLALVIPFDVAELAAATSNV
LLSVFIVTNLALMRLHRREPRPDLTIRAPRWIPPLGAIGAAGLLAAQLF*
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mRNA from alignment at P-wetherbeei_contig12959:665..1864-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12959.2.1 ID=mRNA_P-wetherbeei_contig12959.2.1|Name=mRNA_P-wetherbeei_contig12959.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1200bp|location=Sequence derived from alignment at P-wetherbeei_contig12959:665..1864- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAACCATCAGCGGATAAAGCGCGCCTTAAGCGAAGCCTGGGGCTGGG TTTGCTTGTCCTGTACGGGGTTGGCGTCATTATTGGCGCTGGCATCTATG TGCTGACCGGGCAGGTTGCTGGCGCCGCCGGAATGGGGGCGCCGCTGTCA TTTCTGCTGGCTGGGTTGCTGGCGGCGCCCACGGCCATCAGCTTTGCAGA ACTTTCCGCGCGTCATCCCGAGGCATCGGGTCAGGCCGCCTACGCGCATA GCGCATTTGGCAATAGTTTATTATCGCGTTGCATCGGTTTTGCCATCGTT GCGGTGGGTATTCTGGCTGCGGCGTCCATCGCACGCGGCTGTGCCGCCTA TCTGACGGGGCTGCTGCCAGTGATTCCCATTGCCGCTGGCGGCGCGCTTA TTGTGATGCTGTTCACTGGCGTTGCATGCCTGACCGTGGCGAATAGCGTG ACGGCGGCCGCCATTATGACGGTGGTCGAGATTGGCGGCCTGTTCTATGT GATCGCGGCGGGTCTGTATCAGACGCATGCCTATACCCCGCCAGCATTCG TGTTTGCGCCGGATGCGATTGCGTCAGGCGCATTTATCGCCATGTTTGCA TTTTTGGGTTTCGAGGCGCTTGCCAATATGGCGGAAGAAACCCATGACCC TGACAAGACGCTGCCCCGCGCCATTCTGCTGTCATTGGGTATTGCAACCA CTTTGTATGTGATTGTGGCCTATGTTGCGGTGAACGTTGCGCCGCTGGAT GTGCTGTCAAACTCCCCAACACCGCTGCTGGACGTGGTGGTTGGTTCGCC CTTCGGTAATGCCGTATTATTCGGCATCATTGCGCTCACCGCCACCGCCA ACGGCGTGCTGATTGAAATTCTGATGGTGTCGCGCATGATGTATGGCATG GCCGATCGCGGCTGGCTGCCGCATCAGCTTGCCCATGTCTGGCCACGCAC CCATGCGCCGGTGCGCGCCACGCTGATTACCGGCGTCATTCTGCTGGCGC TGGTTATACCGTTTGACGTGGCAGAGCTGGCCGCCGCCACCAGCAATGTG CTGCTCAGCGTTTTCATTGTGACCAATCTGGCATTGATGCGGCTGCACCG CAGGGAACCGCGTCCGGATCTGACTATCCGCGCCCCGCGCTGGATACCGC CGCTGGGCGCTATTGGGGCGGCGGGGCTGTTAGCGGCGCAGCTTTTTTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12959:665..1864-

>mRNA_P-wetherbeei_contig12959.2.1 ID=mRNA_P-wetherbeei_contig12959.2.1|Name=mRNA_P-wetherbeei_contig12959.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1200bp|location=Sequence derived from alignment at P-wetherbeei_contig12959:665..1864- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAACCATCAGCGGATAAAGCGCGCCTTAAGCGAAGCCTGGGGCTGGG
TTTGCTTGTCCTGTACGGGGTTGGCGTCATTATTGGCGCTGGCATCTATG
TGCTGACCGGGCAGGTTGCTGGCGCCGCCGGAATGGGGGCGCCGCTGTCA
TTTCTGCTGGCTGGGTTGCTGGCGGCGCCCACGGCCATCAGCTTTGCAGA
ACTTTCCGCGCGTCATCCCGAGGCATCGGGTCAGGCCGCCTACGCGCATA
GCGCATTTGGCAATAGTTTATTATCGCGTTGCATCGGTTTTGCCATCGTT
GCGGTGGGTATTCTGGCTGCGGCGTCCATCGCACGCGGCTGTGCCGCCTA
TCTGACGGGGCTGCTGCCAGTGATTCCCATTGCCGCTGGCGGCGCGCTTA
TTGTGATGCTGTTCACTGGCGTTGCATGCCTGACCGTGGCGAATAGCGTG
ACGGCGGCCGCCATTATGACGGTGGTCGAGATTGGCGGCCTGTTCTATGT
GATCGCGGCGGGTCTGTATCAGACGCATGCCTATACCCCGCCAGCATTCG
TGTTTGCGCCGGATGCGATTGCGTCAGGCGCATTTATCGCCATGTTTGCA
TTTTTGGGTTTCGAGGCGCTTGCCAATATGGCGGAAGAAACCCATGACCC
TGACAAGACGCTGCCCCGCGCCATTCTGCTGTCATTGGGTATTGCAACCA
CTTTGTATGTGATTGTGGCCTATGTTGCGGTGAACGTTGCGCCGCTGGAT
GTGCTGTCAAACTCCCCAACACCGCTGCTGGACGTGGTGGTTGGTTCGCC
CTTCGGTAATGCCGTATTATTCGGCATCATTGCGCTCACCGCCACCGCCA
ACGGCGTGCTGATTGAAATTCTGATGGTGTCGCGCATGATGTATGGCATG
GCCGATCGCGGCTGGCTGCCGCATCAGCTTGCCCATGTCTGGCCACGCAC
CCATGCGCCGGTGCGCGCCACGCTGATTACCGGCGTCATTCTGCTGGCGC
TGGTTATACCGTTTGACGTGGCAGAGCTGGCCGCCGCCACCAGCAATGTG
CTGCTCAGCGTTTTCATTGTGACCAATCTGGCATTGATGCGGCTGCACCG
CAGGGAACCGCGTCCGGATCTGACTATCCGCGCCCCGCGCTGGATACCGC
CGCTGGGCGCTATTGGGGCGGCGGGGCTGTTAGCGGCGCAGCTTTTTTAG
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