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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1663 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 1659 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185967.4087641-CDS-P-wetherbeei_contig12942:191..1850 | 1683185967.4087641-CDS-P-wetherbeei_contig12942:191..1850 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig12942 192..1850 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12942.1.1 >prot_P-wetherbeei_contig12942.1.1 ID=prot_P-wetherbeei_contig12942.1.1|Name=mRNA_P-wetherbeei_contig12942.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=553bp
QCSRRRLQCVYSRKQKSGPKGPSCKRRDSQGALVHRGSVSSNGSSSSHRG
SVSTDRISVSSHRDSVSRGTGGASSGAGSNGTSSGPGNMCSGRSGGGRSG
GRDVFASAGVADSRGKDTGGGVNGSGTVGHQPPMHGAYAGLLPGRFRPLG
ASGDFGIGDGGGGGSEGVGGGSASGDGWGMPVSESYSGMRGRPGGGGGGG
SLGDNSGGDSDGGAGAGYGGDSSGIRCGGNSYGDSGNHTFYPFQQMWMQH
DAATASVFTAVSNAAGAGGVLPRGAYGMAGAPSVPQLQLHGFPPQPGWID
AQRRGRQQAAAAAAVYQDAGGRKRWRPGGGAEPSDNVDATHYGSGGGSGR
YGNYCGGHYVGGHSGGRFSRDADYGPVAYCSAGGTNGGSAVGGGGGSGGD
AVGQSRDDGEQRQTGGSAGRRPGRDDGAGTGADMDGKNGNDRVAEGAMEL
PSIHLSALAAYSSDLTLQLAAAGAWPTPRHPFPGHGFAGRGLGDSGDRCG
PGGDGSSGGSGGYYHLDFPGARTAADVSGEHAPTPYTRQPQPAMDTLGLN
GGR back to topmRNA from alignment at P-wetherbeei_contig12942:192..1852+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig12942.1.1 ID=mRNA_P-wetherbeei_contig12942.1.1|Name=mRNA_P-wetherbeei_contig12942.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1661bp|location=Sequence derived from alignment at P-wetherbeei_contig12942:192..1852+ (Phaeothamnion wetherbeei SAG_119_79)
CAGTGTTCGCGGCGGCGACTGCAGTGCGTCTACAGCCGCAAGCAGAAAAG
CGGTCCCAAGGGCCCCTCCTGCAAACGCCGCGACAGCCAGGGAGCATTGG
TCCACCGCGGCAGCGTAAGCAGCAATGGCAGCAGCAGCAGCCACCGCGGC
AGCGTTAGCACCGACCGCATCAGCGTTAGCAGCCACCGCGACAGCGTAAG
CAGGGGCACAGGCGGCGCTAGCAGTGGTGCCGGCAGCAATGGGACCAGCA
GCGGTCCCGGCAACATGTGCAGCGGCCGCAGTGGCGGCGGCAGGAGCGGC
GGCAGGGACGTTTTTGCTAGTGCTGGTGTCGCCGACAGCCGCGGCAAAGA
CACCGGTGGCGGCGTGAATGGCAGCGGTACCGTCGGCCATCAGCCCCCAA
TGCATGGGGCGTACGCAGGGCTGCTTCCGGGCCGCTTTAGGCCACTGGGA
GCCAGCGGCGACTTTGGCATAGGTGATGGCGGCGGCGGCGGCAGTGAAGG
CGTCGGCGGCGGAAGTGCCAGCGGCGATGGCTGGGGAATGCCTGTAAGTG
AGAGCTATTCCGGGATGCGTGGGCGACCCGGTGGCGGTGGCGGTGGCGGC
AGCCTTGGCGACAACAGCGGCGGCGACAGCGATGGCGGCGCCGGCGCCGG
CTATGGCGGCGACTCGAGTGGTATCCGCTGCGGCGGCAATTCGTACGGGG
ACAGCGGCAACCATACATTCTATCCCTTCCAGCAGATGTGGATGCAACAT
GACGCGGCGACAGCCAGCGTCTTCACCGCCGTCTCGAACGCCGCAGGCGC
TGGCGGAGTTCTGCCCCGCGGCGCTTACGGCATGGCGGGGGCGCCCTCGG
TGCCCCAGCTGCAGCTTCATGGCTTTCCTCCGCAACCGGGATGGATAGAT
GCGCAACGGCGGGGCCGGCAGCAGGCTGCTGCCGCCGCCGCTGTTTACCA
AGACGCGGGTGGGCGCAAGCGGTGGCGACCTGGCGGGGGAGCAGAGCCTT
CTGACAACGTCGACGCCACTCACTACGGCAGCGGCGGTGGCAGCGGCCGT
TACGGTAATTACTGTGGCGGCCACTACGTTGGCGGCCATTCCGGCGGCCG
CTTCAGCCGCGACGCAGATTACGGCCCCGTGGCTTATTGCAGTGCCGGAG
GCACCAATGGTGGCAGTGCCGTTGGAGGCGGCGGCGGCAGCGGTGGGGAT
GCTGTCGGCCAGTCCCGCGACGATGGCGAGCAACGTCAGACGGGCGGGAG
TGCAGGCAGGCGGCCCGGACGCGACGACGGTGCCGGTACCGGCGCCGATA
TGGACGGTAAAAATGGCAACGACCGCGTCGCCGAGGGAGCTATGGAGCTC
CCTTCGATCCACCTGTCTGCATTGGCGGCGTACAGCAGTGACCTGACGCT
GCAATTGGCGGCGGCGGGCGCCTGGCCGACGCCGCGGCACCCCTTTCCGG
GGCACGGTTTTGCGGGCAGGGGCTTAGGTGATTCCGGCGACCGCTGCGGT
CCCGGCGGCGACGGCAGTTCCGGCGGCAGCGGAGGCTACTATCATTTGGA
CTTTCCGGGCGCCAGGACGGCTGCAGACGTATCCGGAGAGCACGCGCCAA
CTCCGTACACGCGTCAGCCGCAGCCGGCAATGGACACTCTTGGCCTCAAC
GGAGGAAGGTT back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig12942:192..1852+ >mRNA_P-wetherbeei_contig12942.1.1 ID=mRNA_P-wetherbeei_contig12942.1.1|Name=mRNA_P-wetherbeei_contig12942.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1659bp|location=Sequence derived from alignment at P-wetherbeei_contig12942:192..1852+ (Phaeothamnion wetherbeei SAG_119_79)
CAGTGTTCGCGGCGGCGACTGCAGTGCGTCTACAGCCGCAAGCAGAAAAG
CGGTCCCAAGGGCCCCTCCTGCAAACGCCGCGACAGCCAGGGAGCATTGG
TCCACCGCGGCAGCGTAAGCAGCAATGGCAGCAGCAGCAGCCACCGCGGC
AGCGTTAGCACCGACCGCATCAGCGTTAGCAGCCACCGCGACAGCGTAAG
CAGGGGCACAGGCGGCGCTAGCAGTGGTGCCGGCAGCAATGGGACCAGCA
GCGGTCCCGGCAACATGTGCAGCGGCCGCAGTGGCGGCGGCAGGAGCGGC
GGCAGGGACGTTTTTGCTAGTGCTGGTGTCGCCGACAGCCGCGGCAAAGA
CACCGGTGGCGGCGTGAATGGCAGCGGTACCGTCGGCCATCAGCCCCCAA
TGCATGGGGCGTACGCAGGGCTGCTTCCGGGCCGCTTTAGGCCACTGGGA
GCCAGCGGCGACTTTGGCATAGGTGATGGCGGCGGCGGCGGCAGTGAAGG
CGTCGGCGGCGGAAGTGCCAGCGGCGATGGCTGGGGAATGCCTGTAAGTG
AGAGCTATTCCGGGATGCGTGGGCGACCCGGTGGCGGTGGCGGTGGCGGC
AGCCTTGGCGACAACAGCGGCGGCGACAGCGATGGCGGCGCCGGCGCCGG
CTATGGCGGCGACTCGAGTGGTATCCGCTGCGGCGGCAATTCGTACGGGG
ACAGCGGCAACCATACATTCTATCCCTTCCAGCAGATGTGGATGCAACAT
GACGCGGCGACAGCCAGCGTCTTCACCGCCGTCTCGAACGCCGCAGGCGC
TGGCGGAGTTCTGCCCCGCGGCGCTTACGGCATGGCGGGGGCGCCCTCGG
TGCCCCAGCTGCAGCTTCATGGCTTTCCTCCGCAACCGGGATGGATAGAT
GCGCAACGGCGGGGCCGGCAGCAGGCTGCTGCCGCCGCCGCTGTTTACCA
AGACGCGGGTGGGCGCAAGCGGTGGCGACCTGGCGGGGGAGCAGAGCCTT
CTGACAACGTCGACGCCACTCACTACGGCAGCGGCGGTGGCAGCGGCCGT
TACGGTAATTACTGTGGCGGCCACTACGTTGGCGGCCATTCCGGCGGCCG
CTTCAGCCGCGACGCAGATTACGGCCCCGTGGCTTATTGCAGTGCCGGAG
GCACCAATGGTGGCAGTGCCGTTGGAGGCGGCGGCGGCAGCGGTGGGGAT
GCTGTCGGCCAGTCCCGCGACGATGGCGAGCAACGTCAGACGGGCGGGAG
TGCAGGCAGGCGGCCCGGACGCGACGACGGTGCCGGTACCGGCGCCGATA
TGGACGGTAAAAATGGCAACGACCGCGTCGCCGAGGGAGCTATGGAGCTC
CCTTCGATCCACCTGTCTGCATTGGCGGCGTACAGCAGTGACCTGACGCT
GCAATTGGCGGCGGCGGGCGCCTGGCCGACGCCGCGGCACCCCTTTCCGG
GGCACGGTTTTGCGGGCAGGGGCTTAGGTGATTCCGGCGACCGCTGCGGT
CCCGGCGGCGACGGCAGTTCCGGCGGCAGCGGAGGCTACTATCATTTGGA
CTTTCCGGGCGCCAGGACGGCTGCAGACGTATCCGGAGAGCACGCGCCAA
CTCCGTACACGCGTCAGCCGCAGCCGGCAATGGACACTCTTGGCCTCAAC
GGAGGAAGG back to top
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