mRNA_P-wetherbeei_contig12837.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12837.1.1
Unique NamemRNA_P-wetherbeei_contig12837.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: A0A3C0TWP5_9PROT (ATP phosphoribosyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TWP5_9PROT)

HSP 1 Score: 351 bits (900), Expect = 6.640e-119
Identity = 179/244 (73.36%), Postives = 204/244 (83.61%), Query Frame = 1
Query:    1 KTLNMDACMALLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASG-GSKSMAQTLAALEKKMGCTVQLDGAGGSLHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLYNDLITRLNS 729
            K+L+MDA M+LLKPLGFGRADLVVAVPR WIDVR+M DL++VCTDFHRRHGRRLRVATKYL+LTR FFA   +SDYRIVESLGATEGAPNSGAAE IVDITSTGSTL+AN+LK L DGLILRSQACLAASL A+WS +A  ALRQ+LDM++ R RA E K VQFA+G G  S++  L ALEK+ GC  QLDGAGG LHCPAASLY V  QLR AGC HVS+ Q +YIFEPQN LY++ + R+N 
Sbjct:   80 KSLDMDASMSLLKPLGFGRADLVVAVPRGWIDVRSMTDLHDVCTDFHRRHGRRLRVATKYLSLTRKFFADQGVSDYRIVESLGATEGAPNSGAAEVIVDITSTGSTLSANNLKTLGDGLILRSQACLAASLNAKWSSAALDALRQLLDMIEARERARERKHVQFAAGSGGNSLSAVLTALEKEYGCVAQLDGAGGYLHCPAASLYPVTAQLRAAGCRHVSITQPDYIFEPQNALYDNFVARIND 323          
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: A0A351T283_9PROT (ATP phosphoribosyltransferase n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T283_9PROT)

HSP 1 Score: 307 bits (786), Expect = 1.180e-101
Identity = 160/242 (66.12%), Postives = 191/242 (78.93%), Query Frame = 1
Query:    1 KTLNMDACMALLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASGGSKS-MAQTLAALEKKMGCTVQLDGAGGSLHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLYNDLITRL 723
            KTL+++ CM LLKPLGFG+ADLVVAVPR+WIDV +M DL+EV T FHRRHGRRLRVATKYLTLTR FFA H ++DYRIVESLGATEGAPNSGAAEAIVDITSTG+TL AN+LKIL+DG+ILRSQACLAAS  A W D+A+ ALR+ILDM++G +RA+  +LV F +   ++ MA  +AAL+ K GC V L G  GSL C +  LY V++ L  AGCS VS AQ +YIF P+N LY   I  L
Sbjct:   80 KTLDLETCMMLLKPLGFGKADLVVAVPRSWIDVHSMADLDEVSTAFHRRHGRRLRVATKYLTLTRDFFAQHGVADYRIVESLGATEGAPNSGAAEAIVDITSTGTTLVANNLKILNDGVILRSQACLAASRNAVWDDAAKTALRRILDMIEGSARADAERLVHFVTPSDEAAMAGAMAALQSKFGCQVALSGRQGSLQCGSDMLYPVVSALHAAGCSQVSAAQADYIFAPENALYERFIAAL 321          
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: A0A2N3E7Q5_9PROT (ATP phosphoribosyltransferase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3E7Q5_9PROT)

HSP 1 Score: 234 bits (596), Expect = 7.430e-73
Identity = 134/248 (54.03%), Postives = 169/248 (68.15%), Query Frame = 1
Query:    1 KTLNMDACMALLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASGGSKSMAQTLAALEKKMGCTVQLDGAGGS----LHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLYNDLITRLNSR 732
            K  + +  + LL PLGFG AD+VVAVP++WIDV  M DL++V   FH R GRRLRVATKY  LTR FFA H ++DYRIVESLGATEGAP +G AE IVDITSTG+TLTAN+LK+LDDG IL+SQA L A+L A WSD+A  A  +ILD +  ++RA     V+FA GG    A+ LA LEK+ G +V   GAG +    +HCP   LY ++  L   G   V+ A+ +Y+FE +N L   L+ RL SR
Sbjct:   80 KLSSPERDVELLLPLGFGHADVVVAVPQSWIDVATMADLDDVALAFHTRRGRRLRVATKYFNLTRNFFAEHGLTDYRIVESLGATEGAPAAGTAEVIVDITSTGATLTANNLKVLDDGTILKSQANLVAALGADWSDAALAAAGEILDRVSAQARAANTVEVRFAGGGDD--AKLLAELEKRFGVSVPF-GAGAAPVRIVHCPEDRLYDLVAFLNAKGRETVTAARADYVFEAKNPLRERLLERLKSR 324          
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: A0A346QYV5_9HYPH (ATP phosphoribosyltransferase n=1 Tax=Breoghania sp. L-A4 TaxID=2304600 RepID=A0A346QYV5_9HYPH)

HSP 1 Score: 233 bits (594), Expect = 1.440e-72
Identity = 131/236 (55.51%), Postives = 160/236 (67.80%), Query Frame = 1
Query:   31 LLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASGGSKSMAQTLAALEKKMGCTVQLDGAGGS---LHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLYNDLITRLNS 729
            L+  LGFG AD+VVAVP++WIDV  M DL +V +DF  RHGRRLR+ATKY+ LTR FFA H I DYRIVES GATEGAP +GAAE IVDIT+TGSTL AN LKILDDG++LRSQA L AS+T  WS +A  A R ILD +    RA + K ++      ++ AQ   A+E   GCT  +    G    LHCPA  +    T LRD G SHVSVA L+Y+FE  N LY+ L  R+++
Sbjct:   91 LVAALGFGSADVVVAVPKSWIDVATMADLADVASDFRGRHGRRLRIATKYVNLTRQFFAEHGIVDYRIVESAGATEGAPAAGAAELIVDITTTGSTLAANDLKILDDGVMLRSQAHLVASMTGHWSGTALSAARAILDRIAAEERARQVKEIRALVADPEATAQL--AIES-YGCTAPMGAPSGQPLVLHCPARDVADCATFLRDRGASHVSVATLDYVFETTNPLYDPLAARIDA 323          
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: A0A081BA50_9HYPH (ATP phosphoribosyltransferase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BA50_9HYPH)

HSP 1 Score: 233 bits (594), Expect = 1.580e-72
Identity = 130/248 (52.42%), Postives = 172/248 (69.35%), Query Frame = 1
Query:    1 KTLNMDACMALLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASGG-SKSMAQTLAA---LEKKMGCTVQLDGAGG-SLHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLYNDLITRLNS 729
            K +N +  + LL PLGFG AD+VVAVP++WIDVR M DL++V   FH RH RRLRVATKYL LTR FFA H ISDYRIVESLGATEGAP +G+AEAIVDITSTG+TL AN+LK+LDDG++L+SQA L ASLTA W D+A +A   +LDM+  R+ A   K ++FA+    +++   L A   +         L G+G  + +CP+A LY  ++ LR+ G + V+   ++Y+FEP+N L   L  RL +
Sbjct:   80 KIVNPEEKVELLLPLGFGHADVVVAVPQSWIDVRAMADLDDVARGFHIRHKRRLRVATKYLNLTRLFFAEHGISDYRIVESLGATEGAPAAGSAEAIVDITSTGATLAANNLKVLDDGVMLKSQANLVASLTATWCDTALQAATHVLDMITARTEAQRMKEIRFAAPALDQTLVDELLARFDVRVPQEARAALPGSGELAAYCPSAKLYDAVSYLRENGITTVTARDVDYLFEPENALLARLKARLGN 327          
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: A0A6N6VEK8_9HYPH (ATP phosphoribosyltransferase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VEK8_9HYPH)

HSP 1 Score: 229 bits (584), Expect = 4.140e-71
Identity = 126/240 (52.50%), Postives = 161/240 (67.08%), Query Frame = 1
Query:   10 NMDACMALLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASGGSKSMAQTLAALEKKMGCTVQLDGAGGSLHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLYNDLITRLNS 729
            + D  + L+ PLGFG AD+VVAVP++WIDV  M DL++V   FHRRHGRRLR+ATKYL LTR FFA H I+DYRIVES GATEGAP +G AEAIVDIT+TG+TL AN+LKILDDG++L+SQA L ASL A W D A  A   +LD +  R R  E  ++  A GG+   A     L++  GCT +  G   S+ CP  +L+ V  +LR+ G   V+V+  EYIF  +N+L   L  R+  
Sbjct:   84 DADNSVELVLPLGFGYADVVVAVPQSWIDVSTMADLDDVALAFHRRHGRRLRIATKYLNLTRAFFAEHGIADYRIVESAGATEGAPAAGTAEAIVDITTTGTTLAANNLKILDDGVMLKSQANLVASLRATWDDKALAAASAVLDRIDAR-RFAESHVIVTARGGNLDGATAATVLKRDFGCTSE--GVENSVLCPRENLHAVAMRLREFGADTVTVSPAEYIFRARNMLLEKLKARIGG 320          
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: A0A1W9IMV9_9PROT (ATP phosphoribosyltransferase n=1 Tax=Proteobacteria bacterium SG_bin9 TaxID=1827385 RepID=A0A1W9IMV9_9PROT)

HSP 1 Score: 226 bits (575), Expect = 1.060e-69
Identity = 124/236 (52.54%), Postives = 161/236 (68.22%), Query Frame = 1
Query:    7 LNMDACMALLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASGGSKSMAQTLAALEKKMGCTVQLDGAGGS----LHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLY 702
            ++ D  +A+++PLGFG A++VVAVP+AWIDVR M DL++V T F  +H  R+RVATKY+ LTR FFA H++ DYRIVES GATEGAP +GAAE IVDIT+TG+TL AN LK+LDDG+ILRSQA L AS  A WS  AR + R ILD +  R+RA +++ V+    G+   A  LA  E+  G  +   G   S    LHCP A LY + + LRD G   VSV  L+Y+F+  N L+
Sbjct:   82 VDADKRVAMIEPLGFGYANVVVAVPQAWIDVRTMADLDDVTTGFRAQHNHRMRVATKYINLTRAFFAAHNVVDYRIVESAGATEGAPATGAAELIVDITTTGATLAANGLKVLDDGVILRSQANLVASKNADWSPQARESARVILDHIAARARATKYREVRTRFTGAT--ADLLAQAERSFGVVLPFGGPTSSGMITLHCPPAQLYALGSFLRDHGADTVSVGSLDYVFDRDNPLF 315          
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: A0A1Q4BYH0_9HYPH (ATP phosphoribosyltransferase n=16 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q4BYH0_9HYPH)

HSP 1 Score: 225 bits (574), Expect = 1.500e-69
Identity = 125/236 (52.97%), Postives = 162/236 (68.64%), Query Frame = 1
Query:    7 LNMDACMALLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASGGSKSMAQTLAALEKKMGCTVQLDGAGGS----LHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLY 702
            L+ D+ +AL++ LGFG A++VVAVP+AWIDVR M DL++V T+F  +H RR+RVATKY+ LTRGFFA H I DYRIVES GATEGAP +G AE IVDIT+TG+TL AN LK+LDDG+ILRSQA L AS +A WS  AR   R ILD +  R+RA+++K V+    G    A+ LA    + G      G   S    LHCP + +Y + + LRD G   VSVA L+Y+ + +N L+
Sbjct:   83 LDADSRVALIEALGFGSANVVVAVPQAWIDVRTMADLDDVTTEFRAQHNRRMRVATKYINLTRGFFAQHGIVDYRIVESAGATEGAPATGTAEMIVDITTTGATLAANGLKVLDDGVILRSQANLVASRSADWSSDARETARVILDHIAARARASKYKEVRTRFTGCD--AKLLAEAHSRFGVVSPFGGPTSSGMLTLHCPPSQIYALGSFLRDHGADTVSVASLDYVLDRENPLF 316          
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: UPI001BA7FCCA (ATP phosphoribosyltransferase n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BA7FCCA)

HSP 1 Score: 225 bits (574), Expect = 1.550e-69
Identity = 130/238 (54.62%), Postives = 154/238 (64.71%), Query Frame = 1
Query:   10 NMDACMALLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASGGSKSMAQTLAALEKKMGCTVQLDGAGGS----LHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLYNDL 711
            + D  +AL++PLGFG A++VVAVP+AWIDVR M DL++V T F  RH RR+RVATKY+ LTR FFAGH + DYRIVES GATEGAP  G AE IVDIT+TG+TL AN LK+LDDG++LRSQA L AS  A WS  AR   R ILD +  R+RAN FK V+    G    A  L     K G      G   S    LHCP A +Y + T LR  G   VSVA LEY+ +  N LY  L
Sbjct:   84 DADRRVALIEPLGFGYANVVVAVPQAWIDVRTMADLDDVSTAFRARHNRRMRVATKYINLTRNFFAGHGVVDYRIVESAGATEGAPAVGTAELIVDITTTGATLAANGLKVLDDGVMLRSQANLVASREADWSPQARETARIILDHIASRARANAFKEVRTRFQGCN--AALLDEARTKFGVVTPFGGPTSSGMLTLHCPPAQIYGLATFLRVHGADTVSVASLEYVLDRDNPLYTRL 319          
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Match: A0A2N3C0H7_9PROT (ATP phosphoribosyltransferase n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A2N3C0H7_9PROT)

HSP 1 Score: 224 bits (571), Expect = 4.510e-69
Identity = 125/238 (52.52%), Postives = 160/238 (67.23%), Query Frame = 1
Query:   31 LLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRLRVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTGSTLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRSRANEFKLVQFASGGSKSMAQTLAALEKKMGCTVQLD----GAGGSLHCPAASLYTVMTQLRDAGCSHVSVAQLEYIFEPQNLLYNDLITRLNSR 732
            LL PLGFG AD+VVAVP++WIDV  M+DL++V   FHR+ GRRLRVATKY  LTR +FA H ++DYRIVESLGATEGAP +G AE IVDITSTG+TL AN+LK+LDDG +LRSQA L ASL A WSD AR A  +ILD +  ++RA +   V+FASG     A  +  +  +   T+       GA    HCP A LY +++ L   G   V+ A+ +Y+FE +N L   L  RL+ +
Sbjct:   90 LLLPLGFGHADVVVAVPQSWIDVATMEDLDDVALAFHRKRGRRLRVATKYFNLTRNYFAAHGLTDYRIVESLGATEGAPAAGTAEVIVDITSTGATLAANNLKVLDDGTMLRSQANLVASLGAAWSDKARAAAGEILDRVSAQARAAKTVEVRFASGADD--AALIGEIANRFDVTLPFGANAAGAVRVAHCPEAKLYDLVSFLYAQGRETVTAARTDYVFEAKNPLRERLTARLHGK 325          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12837.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TWP5_9PROT6.640e-11973.36ATP phosphoribosyltransferase n=1 Tax=Alphaproteob... [more]
A0A351T283_9PROT1.180e-10166.12ATP phosphoribosyltransferase n=4 Tax=Alphaproteob... [more]
A0A2N3E7Q5_9PROT7.430e-7354.03ATP phosphoribosyltransferase n=1 Tax=Alphaproteob... [more]
A0A346QYV5_9HYPH1.440e-7255.51ATP phosphoribosyltransferase n=1 Tax=Breoghania s... [more]
A0A081BA50_9HYPH1.580e-7252.42ATP phosphoribosyltransferase n=1 Tax=Tepidicaulis... [more]
A0A6N6VEK8_9HYPH4.140e-7152.50ATP phosphoribosyltransferase n=1 Tax=Parvibaculum... [more]
A0A1W9IMV9_9PROT1.060e-6952.54ATP phosphoribosyltransferase n=1 Tax=Proteobacter... [more]
A0A1Q4BYH0_9HYPH1.500e-6952.97ATP phosphoribosyltransferase n=16 Tax=Alphaproteo... [more]
UPI001BA7FCCA1.550e-6954.62ATP phosphoribosyltransferase n=1 Tax=unclassified... [more]
A0A2N3C0H7_9PROT4.510e-6952.52ATP phosphoribosyltransferase n=2 Tax=unclassified... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12837contigP-wetherbeei_contig12837:3..737 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_1417
Preferred namehisG
PFAMsHisG,HisG_C
Model size735
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC02819,RC03200
KEGG koko:K00765
KEGG ReactionR01071
KEGG Pathwayko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230
KEGG ModuleM00026
Hectar predicted targeting categoryother localisation
GOsGO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons1
Evalue3.61e-72
EggNOG OGsCOG0040@1|root,COG0040@2|Bacteria,1MUCY@1224|Proteobacteria,2TT0H@28211|Alphaproteobacteria,4BQEU@82117|unclassified Alphaproteobacteria
EC2.4.2.17
DescriptionCatalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
Cds size723
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185963.3699968-UTR-P-wetherbeei_contig12837:2..141683185963.3699968-UTR-P-wetherbeei_contig12837:2..14Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12837 3..14 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185963.380532-CDS-P-wetherbeei_contig12837:14..7371683185963.380532-CDS-P-wetherbeei_contig12837:14..737Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12837 15..737 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12837.1.1prot_P-wetherbeei_contig12837.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12837 15..737 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12837.1.1

>prot_P-wetherbeei_contig12837.1.1 ID=prot_P-wetherbeei_contig12837.1.1|Name=mRNA_P-wetherbeei_contig12837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=241bp
MDACMALLKPLGFGRADLVVAVPRAWIDVRNMDDLNEVCTDFHRRHGRRL
RVATKYLTLTRGFFAGHSISDYRIVESLGATEGAPNSGAAEAIVDITSTG
STLTANHLKILDDGLILRSQACLAASLTARWSDSARRALRQILDMMQGRS
RANEFKLVQFASGGSKSMAQTLAALEKKMGCTVQLDGAGGSLHCPAASLY
TVMTQLRDAGCSHVSVAQLEYIFEPQNLLYNDLITRLNSR*
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mRNA from alignment at P-wetherbeei_contig12837:3..737+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12837.1.1 ID=mRNA_P-wetherbeei_contig12837.1.1|Name=mRNA_P-wetherbeei_contig12837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig12837:3..737+ (Phaeothamnion wetherbeei SAG_119_79)
AAAACGCTGAATATGGATGCCTGCATGGCGCTGCTGAAACCGCTGGGGTT CGGGCGCGCCGATCTGGTGGTGGCTGTCCCGCGCGCCTGGATTGATGTGC GCAACATGGATGATCTGAACGAGGTTTGTACGGATTTTCACCGGCGGCAT GGGCGGCGGTTGCGGGTGGCGACAAAATATCTGACGCTGACGCGGGGCTT CTTTGCCGGCCATAGCATTTCCGATTACCGCATTGTGGAAAGCCTGGGCG CGACCGAAGGCGCGCCCAATTCGGGTGCGGCGGAAGCCATTGTCGACATT ACATCCACCGGCAGCACTTTGACCGCCAATCATCTCAAAATACTGGATGA TGGGCTTATCCTGCGCAGTCAGGCCTGTCTGGCGGCGTCTTTGACGGCGC GCTGGAGCGATAGCGCGCGCAGGGCGTTGCGCCAGATCCTGGATATGATG CAGGGGCGCAGCCGGGCGAATGAATTCAAACTTGTGCAGTTCGCATCCGG CGGCAGCAAAAGCATGGCGCAGACCCTGGCGGCGCTGGAAAAAAAGATGG GGTGCACTGTGCAACTCGATGGCGCGGGCGGAAGCCTGCATTGCCCCGCA GCAAGTCTGTATACCGTGATGACCCAGTTGCGCGATGCCGGATGCAGCCA TGTCAGCGTGGCGCAGCTCGAATATATTTTTGAGCCGCAAAACCTGCTGT ATAATGATCTCATCACACGGCTGAACAGCCGGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12837:3..737+

>mRNA_P-wetherbeei_contig12837.1.1 ID=mRNA_P-wetherbeei_contig12837.1.1|Name=mRNA_P-wetherbeei_contig12837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig12837:3..737+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATGCCTGCATGGCGCTGCTGAAACCGCTGGGGTTCGGGCGCGCCGA
TCTGGTGGTGGCTGTCCCGCGCGCCTGGATTGATGTGCGCAACATGGATG
ATCTGAACGAGGTTTGTACGGATTTTCACCGGCGGCATGGGCGGCGGTTG
CGGGTGGCGACAAAATATCTGACGCTGACGCGGGGCTTCTTTGCCGGCCA
TAGCATTTCCGATTACCGCATTGTGGAAAGCCTGGGCGCGACCGAAGGCG
CGCCCAATTCGGGTGCGGCGGAAGCCATTGTCGACATTACATCCACCGGC
AGCACTTTGACCGCCAATCATCTCAAAATACTGGATGATGGGCTTATCCT
GCGCAGTCAGGCCTGTCTGGCGGCGTCTTTGACGGCGCGCTGGAGCGATA
GCGCGCGCAGGGCGTTGCGCCAGATCCTGGATATGATGCAGGGGCGCAGC
CGGGCGAATGAATTCAAACTTGTGCAGTTCGCATCCGGCGGCAGCAAAAG
CATGGCGCAGACCCTGGCGGCGCTGGAAAAAAAGATGGGGTGCACTGTGC
AACTCGATGGCGCGGGCGGAAGCCTGCATTGCCCCGCAGCAAGTCTGTAT
ACCGTGATGACCCAGTTGCGCGATGCCGGATGCAGCCATGTCAGCGTGGC
GCAGCTCGAATATATTTTTGAGCCGCAAAACCTGCTGTATAATGATCTCA
TCACACGGCTGAACAGCCGGTAG
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