mRNA_P-wetherbeei_contig12810.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12810.1.1
Unique NamemRNA_P-wetherbeei_contig12810.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A537BHL5_9PROT (TRAP transporter substrate-binding protein n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BHL5_9PROT)

HSP 1 Score: 353 bits (905), Expect = 4.720e-119
Identity = 172/282 (60.99%), Postives = 215/282 (76.24%), Query Frame = 1
Query:    1 KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAILKAY 846
            KNVRQFAD++G AT G LQI +HS  +LIKHPEIKRAVQTGQVPI E L+S+LANE+ +FAFDSNPF+A SY K+ +LW  A+P LEKRLDAQGI LLYSV WPP  ++ KKEINS AD KG + R++SP T+RLAEL+GA    +  P++PQAF+TG++D+ I S A GVDTQ WD  +H Y+ QA LPQNMV+V K A +KL+   QKAV DAA  AETRGW  SEAE    ++T+++ G+K+M P  KLAAE + +G++M  EW  KAGAEGEAIL A+
Sbjct:   38 KNVRQFADEVGSATRGSLQIQVHSNGALIKHPEIKRAVQTGQVPIGELLISVLANESPLFAFDSNPFVANSYPKETKLWRIARPYLEKRLDAQGIKLLYSVPWPPQGLYAKKEINSSADLKGAKFRTYSPTTARLAELMGAIPTTVQVPDIPQAFKTGLVDSMITSGATGVDTQAWDYLSHYYDTQAFLPQNMVVVNKNAWSKLNSDDQKAVLDAARAAETRGWKTSEAENEGYVKTMASHGIKIMKPSAKLAAEFEAIGKQMAVEWAKKAGAEGEAILSAF 319          
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A534HB78_9GAMM (TRAP transporter substrate-binding protein n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A534HB78_9GAMM)

HSP 1 Score: 347 bits (890), Expect = 8.640e-117
Identity = 173/282 (61.35%), Postives = 212/282 (75.18%), Query Frame = 1
Query:    1 KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAILKAY 846
            KN R+FA+D+ KAT GKLQI +HS  SLIKHPEIKRAVQTGQVPI E L+S+LANE+ +FAFDS PFLA SY K++ LW AA+P +E RLDAQG+ LLYSV WPP  I+TKKEIN+L+D KG + R++SP TSR AEL+GA    +  P+VPQAFRTG++DA I S A GVDTQ WD   + Y+ QA LPQNMVIVGKAA  KL  + QKAV  AA  AE RGW  SE E    ++T+++ G+K+M P  KL++E   VG+K+  EW AKAGAEG AILKA+
Sbjct:   38 KNARRFAEDVAKATAGKLQIQVHSNASLIKHPEIKRAVQTGQVPIGEVLISVLANESPLFAFDSIPFLANSYAKERNLWQAAQPHVEHRLDAQGVKLLYSVPWPPQGIYTKKEINALSDLKGTKFRTYSPTTSRFAELIGAVPTTVQVPDVPQAFRTGLVDAMITSGATGVDTQAWDYLQYYYDTQAFLPQNMVIVGKAAFGKLGASEQKAVLGAAKEAEARGWKTSETENESYVKTMASHGIKIMKPSAKLSSEFDAVGKKIADEWGAKAGAEGGAILKAF 319          
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A7W0X4Z2_9PROT (TRAP transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7W0X4Z2_9PROT)

HSP 1 Score: 341 bits (875), Expect = 1.530e-114
Identity = 172/282 (60.99%), Postives = 209/282 (74.11%), Query Frame = 1
Query:    1 KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAILKAY 846
            K VRQFAD+I K   GKLQI +HS  SLIKHPEIKRAVQTGQVPI E L+S+LANE+ +FAFDSNPFLA  YDK+++LW  AKP +EKRLDAQGI LLYSV WPP A+  KKEI S  D KG++ R++SP TSRLAEL+GA    +  PEVPQAFRTG++D  I S++GGVD+Q WD  +H Y+ QA LPQN+V V KAA  KLD A QK V +AAA AE RGW AS+ +  ++++ L+ KG+KV  P  KLA E   +G+ +  EW  KAG EGEAIL AY
Sbjct:   38 KGVRQFADEIAK--DGKLQITVHSNASLIKHPEIKRAVQTGQVPIGEILISVLANESPLFAFDSNPFLADGYDKERKLWNIAKPYIEKRLDAQGIKLLYSVPWPPQALWAKKEIQSTGDMKGMKFRTYSPTTSRLAELVGAVPTTVQLPEVPQAFRTGVVDLMITSSSGGVDSQAWDYLSHFYDTQAFLPQNIVFVNKAAFEKLDAATQKTVLEAAARAEQRGWEASQQDNERAIKLLAEKGIKVGKPNAKLATEFGAIGKTIAEEWAKKAGPEGEAILNAY 317          
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A1F4F3U1_9PROT (C4-dicarboxylate ABC transporter substrate-binding protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F3U1_9PROT)

HSP 1 Score: 322 bits (826), Expect = 5.260e-107
Identity = 163/283 (57.60%), Postives = 199/283 (70.32%), Query Frame = 1
Query:    1 KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAILKAYG 849
            KNV QF  ++ +A+ GKL I  H+  S+IKHPEIKRAVQTGQVPI E LVS+LANE A+FAFDSNPFLA SY KQ++LW+ AKP +EKRLDAQGI +LYSV WPP  ++ KKE+ S+AD KG + R++SP TSR AEL+GA    I  PE+PQAFRTG +D+ I S A GVD+Q WD  TH ++ QA LPQN+VIV KAA  KLD A QKAV +AA TAE RGW  SEAE  + ++T++ KG+K                      W  KAG +GEAILKAYG
Sbjct:   43 KNVVQFTQEVAQASAGKLTISTHTNGSMIKHPEIKRAVQTGQVPIGEILVSVLANENAIFAFDSNPFLANSYAKQRKLWSVAKPTIEKRLDAQGIMVLYSVPWPPQGVYAKKELQSVADLKGAKFRTYSPTTSRFAELMGAIPTTIQVPEIPQAFRTGQVDSMITSGATGVDSQAWDYLTHYHDTQAFLPQNVVIVNKAAWGKLDAATQKAVMNAARTAEERGWKTSEAENERYVKTMADKGIKXXXXXXXXXXXXXXXXXXXXXXWAQKAGPDGEAILKAYG 325          
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A536SJR7_9PROT (TRAP transporter substrate-binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SJR7_9PROT)

HSP 1 Score: 321 bits (823), Expect = 3.890e-106
Identity = 169/315 (53.65%), Postives = 209/315 (66.35%), Query Frame = 1
Query:    1 KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVY---------------------------------NVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAILKAY 846
            KNV QFA D+ K+TGGKLQI +HS  SLIK PEIKRAV TGQVPI E LVS+LANE+ +FAFDSNPFLA SY K+++LW  A+P LEKRLDAQGI LLYSVAWPP  I+ KK I+S+AD KG + R++SP TSR AEL+GA    +  PE+PQAFRTG++D+ I S A GVDTQ WD  +H Y                                      LPQN+VIV K A  KLD A QKA+ DAA  AE RGW  SE+E  + ++T++ KGVK++ P  +L+AE   +G+++  EW  KAG EGEAILK +
Sbjct:   39 KNVVQFAADVAKSTGGKLQINVHSNGSLIKMPEIKRAVLTGQVPIGELLVSVLANESPLFAFDSNPFLANSYAKERKLWGIARPYLEKRLDAQGIKLLYSVAWPPQGIYAKKPIDSVADLKGAKFRTYSPSTSRFAELMGAIPTTVQVPEIPQAFRTGLVDSMITSGATGVDTQAWDYLSHYYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQNIVIVNKDAWGKLDAATQKALTDAAKAAEERGWKTSESENERYVKTMADKGVKIVKPSARLSAEFAKIGKQIADEWAQKAGPEGEAILKTF 353          
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A1F4C8Y3_9PROT (C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4C8Y3_9PROT)

HSP 1 Score: 312 bits (799), Expect = 5.530e-103
Identity = 159/279 (56.99%), Postives = 196/279 (70.25%), Query Frame = 1
Query:    1 KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAIL 837
            KNV+QFADDI  A+GGKL+IV+HS  SLIKHPEIKRAVQTGQV I E L+S+L NE  +FAFDSNPFLAP+Y   K+L   A+P +EKRLDAQGI +LY+V WPP  I+TKK  NS AD KGV+ R+++P TS  A+L+GA    +  PE+PQAF TG+++A I S A GVDTQ WD      + +A LP NMVIV KAA AKLDPA QK V   A  AE RGWAAS        +T+++KG+ V  P  KL AEL  +G+ M  EW+ K G + +AIL
Sbjct:   40 KNVKQFADDIKAASGGKLEIVVHSNASLIKHPEIKRAVQTGQVSIGEILISVLGNENPIFAFDSNPFLAPNYSAAKKLLRVARPYVEKRLDAQGIKVLYAVPWPPQGIYTKKPFNSTADLKGVKFRTYNPATSEFAKLMGAIPTTVQVPEIPQAFLTGLVEAMITSGATGVDTQAWDYLKFYTDTEAFLPFNMVIVNKAAFAKLDPALQKQVVSIATKAEERGWAASAENNEGYKKTMASKGITVQKPNAKLEAELNAIGKVMAQEWMKKTGPDAQAIL 318          
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A2V1JZ28_9BURK (C4-dicarboxylate ABC transporter substrate-binding protein n=2 Tax=Alcaligenaceae TaxID=506 RepID=A0A2V1JZ28_9BURK)

HSP 1 Score: 297 bits (760), Expect = 4.350e-97
Identity = 147/282 (52.13%), Postives = 192/282 (68.09%), Query Frame = 1
Query:    1 KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAILKAY 846
            +N RQFA +I +AT G+L+I + S ++L+K PE+KR VQ G V + E LV+ + NE  +F  DS PFLA S+D+ ++LW A +P LE+RLDAQGI LLYS  WPP  I+TKK I SLAD  GVR R +SP+TSRLA L+GA    +  PE+PQAF TG+IDA + S A GVDTQ WD   H Y+ QA +P N VIV K A  +L P  Q+AVRDAAA AETRGW  +  +  K  + ++  G++V    PKLA EL+ +G +M  EW AKAG +G+ +L AY
Sbjct:   36 QNARQFAQEIQEATKGELEIKVQSNSTLLKRPEVKRGVQQGVVQVGEVLVAAMGNEDPLFEVDSVPFLASSFDESEKLWKATRPFLEQRLDAQGIVLLYSAPWPPQGIYTKKPIESLADLAGVRFRGYSPVTSRLASLMGATPTTVQTPEIPQAFSTGVIDAMLTSPATGVDTQAWDYVKHYYDAQAFIPLNFVIVNKRAFDRLSPESQQAVRDAAARAETRGWTDAREQTQKLTDIMAQNGMEVAPLPPKLAEELRAIGERMVGEWKAKAGEDGQKLLDAY 317          
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A068SYY3_NEOGA (Extracellular solute-binding protein, family 7 n=21 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A068SYY3_NEOGA)

HSP 1 Score: 291 bits (744), Expect = 1.540e-94
Identity = 147/282 (52.13%), Postives = 194/282 (68.79%), Query Frame = 1
Query:    1 KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAILKAY 846
            +N+ QFA D+  A+ GKL+I +H   SL K P+IKRAVQT Q    E L+S+  NE  VF  D  PFLA S+D  K+L+AA+KP +EK LDAQG+ LLY+  WPP  I TKK++NS AD KG++ R+++  TSR+A+L+GA  V + A E+PQA  TG++D  + S+A GVD++ W+S TH Y+ QA +P+N++ V KAA A LDPA QKAV DAAA AETRGWA    + A  +ETL   G+KV+ P   L   L DVG K+T +W  KAGA+G AIL AY
Sbjct:   45 ENLMQFAKDVETASAGKLKITVHPSASLFKAPDIKRAVQTSQAQAGEVLISLHENENPVFGIDVVPFLATSFDASKKLYAASKPAIEKALDAQGLKLLYATPWPPQGIFTKKDVNSTADLKGLKWRAYNVGTSRIADLVGAQPVTVQAAELPQALATGVVDGLMTSSATGVDSKIWESLTHYYDTQAWIPKNVIFVNKAAFAALDPAVQKAVTDAAAAAETRGWALGAEKTAAYMETLKKNGMKVLEPSADLKKGLADVGSKLTEDWSKKAGADGAAILDAY 326          
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A0P6WAS1_9HYPH (C4-dicarboxylate ABC transporter substrate-binding protein n=2 Tax=Prosthecomicrobium hirschii TaxID=665126 RepID=A0A0P6WAS1_9HYPH)

HSP 1 Score: 290 bits (743), Expect = 1.920e-94
Identity = 151/281 (53.74%), Postives = 195/281 (69.40%), Query Frame = 1
Query:    4 NVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAILKAY 846
            N RQF D++GKATGG+L I +HS  SL+K PEIKR VQTG V I E LVS L NE A+FAFDS P LA SY + K+L+A AKP L  RL+ QG+ LLYSVAWPP  ++ KK++ +LAD KG++ RS++P T+R A+LLGA+ V +   E+PQAFR G+ +A I+S A GVDTQ WD  +  Y+ QA LPQN+V   KAA   L  A +KAV  AAA AE RGWA SE       +T++ KG+KV  P   +AAEL  +G  M +EW  KAG +G+AI++A+
Sbjct:   43 NNRQFVDEVGKATGGRLAITVHSNASLLKLPEIKRGVQTGTVQIGELLVSTLGNEDAIFAFDSIPGLATSYAQAKKLYAIAKPALSARLEKQGMILLYSVAWPPQGVYAKKDMAALADLKGLKFRSYNPATARFAQLLGASPVTVQQAELPQAFRAGLAEAMISSGATGVDTQAWDYLSSYYDTQAFLPQNIVFANKAAFDALSEADRKAVLAAAAAAEARGWAESEKLNEGFKKTMAEKGMKVGAPTATMAAELTKIGETMAAEWADKAGPDGKAIIEAF 323          
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Match: A0A831W2X9_9GAMM (C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A831W2X9_9GAMM)

HSP 1 Score: 290 bits (743), Expect = 1.980e-94
Identity = 143/281 (50.89%), Postives = 196/281 (69.75%), Query Frame = 1
Query:    1 KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLVSILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYSVAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPEVPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAALAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGPKLAAELQDVGRKMTSEWVAKAGAEGEAILKA 843
            KNVR+FA D+ KAT G+L+I +HSG SL KHPEI RAV+TGQVPI E  + +L N+  VF  D+ PFLA  +   KRLW A++P +EK L  QG+TLLY+V WPP   +TKK ++S+ADFKG+++R++SP TSRLA LLGA+   +  PE+PQAF TG+IDA + S   GV +Q WD   +  + QA +P+NMV++   AL +L  A +KA+ +AA+ AE RGW  +  E A+  + L  KG++V  P  +   ELQ +G++M SEW  +AGAEG+AILKA
Sbjct:   44 KNVREFAADVSKATNGELKITVHSGASLFKHPEIFRAVRTGQVPIGELFMGLLGNQDPVFKVDNIPFLASDFASAKRLWDASRPYVEKSLAKQGVTLLYAVPWPPQGFYTKKPVSSVADFKGMKMRAYSPTTSRLAVLLGASPTTVQTPEIPQAFSTGIIDAMVTSPTTGVSSQAWDFVKYYTDTQAWIPKNMVVINTRALKRLPEAQRKALLEAASRAEARGWEMARRETAEKTQILREKGMEVSAPTEQFKRELQAIGKEMASEWAREAGAEGQAILKA 324          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12810.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537BHL5_9PROT4.720e-11960.99TRAP transporter substrate-binding protein n=4 Tax... [more]
A0A534HB78_9GAMM8.640e-11761.35TRAP transporter substrate-binding protein n=3 Tax... [more]
A0A7W0X4Z2_9PROT1.530e-11460.99TRAP transporter substrate-binding protein n=1 Tax... [more]
A0A1F4F3U1_9PROT5.260e-10757.60C4-dicarboxylate ABC transporter substrate-binding... [more]
A0A536SJR7_9PROT3.890e-10653.65TRAP transporter substrate-binding protein n=2 Tax... [more]
A0A1F4C8Y3_9PROT5.530e-10356.99C4-dicarboxylate ABC transporter substrate-binding... [more]
A0A2V1JZ28_9BURK4.350e-9752.13C4-dicarboxylate ABC transporter substrate-binding... [more]
A0A068SYY3_NEOGA1.540e-9452.13Extracellular solute-binding protein, family 7 n=2... [more]
A0A0P6WAS1_9HYPH1.920e-9453.74C4-dicarboxylate ABC transporter substrate-binding... [more]
A0A831W2X9_9GAMM1.980e-9450.89C4-dicarboxylate ABC transporter substrate-binding... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12810contigP-wetherbeei_contig12810:2..856 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1028801.RG1141_CH41600
PFAMsDctP
Model size855
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.46e-97
EggNOG OGsCOG1638@1|root,COG1638@2|Bacteria,1MVYB@1224|Proteobacteria,2TT88@28211|Alphaproteobacteria,4BB09@82115|Rhizobiaceae
DescriptionBacterial extracellular solute-binding protein, family 7
Cds size855
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185962.3410323-CDS-P-wetherbeei_contig12810:1..8561683185962.3410323-CDS-P-wetherbeei_contig12810:1..856Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12810 2..856 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12810.1.1prot_P-wetherbeei_contig12810.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12810 2..856 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12810.1.1

>prot_P-wetherbeei_contig12810.1.1 ID=prot_P-wetherbeei_contig12810.1.1|Name=mRNA_P-wetherbeei_contig12810.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=285bp
KNVRQFADDIGKATGGKLQIVIHSGNSLIKHPEIKRAVQTGQVPIAETLV
SILANEAAVFAFDSNPFLAPSYDKQKRLWAAAKPVLEKRLDAQGITLLYS
VAWPPTAIHTKKEINSLADFKGVRLRSFSPITSRLAELLGANAVLIAAPE
VPQAFRTGMIDAQINSAAGGVDTQTWDSTTHVYNVQAILPQNMVIVGKAA
LAKLDPAGQKAVRDAAATAETRGWAASEAELAKSLETLSAKGVKVMNPGP
KLAAELQDVGRKMTSEWVAKAGAEGEAILKAYGN*
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mRNA from alignment at P-wetherbeei_contig12810:2..856+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12810.1.1 ID=mRNA_P-wetherbeei_contig12810.1.1|Name=mRNA_P-wetherbeei_contig12810.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=855bp|location=Sequence derived from alignment at P-wetherbeei_contig12810:2..856+ (Phaeothamnion wetherbeei SAG_119_79)
AAGAACGTGCGCCAGTTTGCCGACGACATTGGCAAGGCTACGGGCGGCAA GCTGCAGATCGTCATCCATTCGGGAAATTCGCTGATCAAGCACCCGGAAA TCAAGCGCGCGGTCCAGACCGGGCAGGTGCCGATCGCCGAGACGCTCGTT TCCATCCTGGCGAACGAGGCCGCGGTCTTCGCCTTTGACTCCAACCCCTT CCTCGCACCCAGCTACGACAAGCAAAAGCGACTGTGGGCGGCGGCAAAGC CTGTCCTCGAAAAGCGCCTGGATGCGCAGGGGATCACGCTGCTCTACTCG GTGGCATGGCCGCCCACCGCCATCCATACCAAGAAGGAAATCAACTCGCT CGCCGATTTCAAGGGCGTACGGCTGCGCTCGTTCAGCCCGATCACGTCCC GCCTTGCCGAACTGCTCGGCGCCAACGCGGTCCTGATCGCTGCGCCCGAA GTGCCGCAGGCGTTCCGCACCGGGATGATCGACGCGCAGATCAACTCCGC CGCAGGCGGCGTGGACACCCAGACTTGGGATTCCACGACGCACGTCTACA ACGTACAGGCGATCCTCCCGCAGAACATGGTCATCGTCGGCAAGGCCGCA TTGGCGAAGCTCGATCCCGCCGGCCAGAAAGCTGTGCGTGACGCGGCGGC AACGGCGGAGACACGCGGCTGGGCGGCAAGCGAAGCCGAACTCGCGAAGA GCCTGGAGACGCTTTCCGCCAAGGGGGTAAAAGTGATGAACCCGGGTCCC AAGCTCGCGGCGGAACTGCAGGATGTCGGCAGGAAGATGACCTCCGAATG GGTCGCCAAGGCGGGTGCGGAAGGCGAAGCGATCCTCAAAGCCTACGGAA ACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12810:2..856+

>mRNA_P-wetherbeei_contig12810.1.1 ID=mRNA_P-wetherbeei_contig12810.1.1|Name=mRNA_P-wetherbeei_contig12810.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=855bp|location=Sequence derived from alignment at P-wetherbeei_contig12810:2..856+ (Phaeothamnion wetherbeei SAG_119_79)
AAGAACGTGCGCCAGTTTGCCGACGACATTGGCAAGGCTACGGGCGGCAA
GCTGCAGATCGTCATCCATTCGGGAAATTCGCTGATCAAGCACCCGGAAA
TCAAGCGCGCGGTCCAGACCGGGCAGGTGCCGATCGCCGAGACGCTCGTT
TCCATCCTGGCGAACGAGGCCGCGGTCTTCGCCTTTGACTCCAACCCCTT
CCTCGCACCCAGCTACGACAAGCAAAAGCGACTGTGGGCGGCGGCAAAGC
CTGTCCTCGAAAAGCGCCTGGATGCGCAGGGGATCACGCTGCTCTACTCG
GTGGCATGGCCGCCCACCGCCATCCATACCAAGAAGGAAATCAACTCGCT
CGCCGATTTCAAGGGCGTACGGCTGCGCTCGTTCAGCCCGATCACGTCCC
GCCTTGCCGAACTGCTCGGCGCCAACGCGGTCCTGATCGCTGCGCCCGAA
GTGCCGCAGGCGTTCCGCACCGGGATGATCGACGCGCAGATCAACTCCGC
CGCAGGCGGCGTGGACACCCAGACTTGGGATTCCACGACGCACGTCTACA
ACGTACAGGCGATCCTCCCGCAGAACATGGTCATCGTCGGCAAGGCCGCA
TTGGCGAAGCTCGATCCCGCCGGCCAGAAAGCTGTGCGTGACGCGGCGGC
AACGGCGGAGACACGCGGCTGGGCGGCAAGCGAAGCCGAACTCGCGAAGA
GCCTGGAGACGCTTTCCGCCAAGGGGGTAAAAGTGATGAACCCGGGTCCC
AAGCTCGCGGCGGAACTGCAGGATGTCGGCAGGAAGATGACCTCCGAATG
GGTCGCCAAGGCGGGTGCGGAAGGCGAAGCGATCCTCAAAGCCTACGGAA
ACTGA
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