mRNA_P-wetherbeei_contig1281.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: D8LRM6_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRM6_ECTSI) HSP 1 Score: 144 bits (364), Expect = 2.690e-43 Identity = 67/95 (70.53%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 1 MSARPVVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSVWHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFATA 285 MSARPV+K STM P+MQEAAIQ VAQDA+RDNN+E+ +A+++K+AFE +YPS+WHCFVGRNFGCFVTHEHTKF Y Y+GQ+GVCLF+TA Sbjct: 1 MSARPVIKTSTMAPDMQEAAIQ-------VAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: A0A836CI24_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI24_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.490e-40 Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 1 Query: 1 MSARPVVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSVWHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFATA 285 MSARPV+K STMP +MQEAAIQ VAQDA++DNN+E+ +A +IK+ FE +YPSVWHCFVGRNFG FVTHE +KF YFY+GQMGVCLF+TA Sbjct: 1 MSARPVIKTSTMPADMQEAAIQ-------VAQDAIKDNNLEKEIAHAIKTNFERIYPSVWHCFVGRNFGSFVTHEQSKFIYFYIGQMGVCLFSTA 88
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: A0A7S2STQ1_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STQ1_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.160e-31 Identity = 56/95 (58.95%), Postives = 70/95 (73.68%), Query Frame = 1 Query: 1 MSARPVVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSVWHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFATA 285 M+ARPV+K S+M P+MQE AIQ AQDA+ N EQ +A +I+ ETM+P+ WH VGRNFGCFVTHE +KF YFY+GQ+GVC+FATA Sbjct: 29 MAARPVIKHSSMTPDMQEMAIQC-------AQDAIAAKNTEQEIAMAIRQNIETMFPATWHVLVGRNFGCFVTHEASKFIYFYIGQVGVCMFATA 116
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: A0A7S1UG18_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG18_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.340e-30 Identity = 52/89 (58.43%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 16 VVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSVWHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFAT 282 VVKAS M EMQ+AA+Q +AQDA+R++ EQ +AS+IK FE++Y + WHCFVGRNFGC+VTH+ F YFY+GQ+G+CLFAT Sbjct: 41 VVKASRMEQEMQDAAVQ-------IAQDAIREHMTEQEIASAIKQQFESIYHTTWHCFVGRNFGCYVTHQENAFVYFYIGQLGICLFAT 122
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: A0A7S1C452_9STRA (Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C452_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.570e-22 Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 16 VVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSVWHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFAT 282 +VK + M M E AI VA A++ N E+ AS+IK+ E ++P VWHCFVGR FGC+VTHE +KF YFYVGQ+GVCLF++ Sbjct: 95 IVKLNQMETVMAERAID-------VALRAIKSCNTEKETASAIKAQMEALFPGVWHCFVGRKFGCYVTHESSKFIYFYVGQLGVCLFSS 176
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: K3WKC4_GLOUD (Dynein light chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKC4_GLOUD) HSP 1 Score: 89.7 bits (221), Expect = 1.720e-21 Identity = 47/93 (50.54%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 10 RPVVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSV-WHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFATA 285 +PVVK STM P++Q+ I VAQ A+ EQ +A+ +K FE Y + WHC VGRN C+VTHE +KF YFY+GQM V LFATA Sbjct: 5 KPVVKTSTMDPDLQDEVI-------LVAQHAMDTEIDEQQIAAKVKQHFEQKYHGMLWHCCVGRNVACYVTHEQSKFLYFYIGQMAVVLFATA 90
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: A0A7S3XKJ6_OXYMA (Dynein light chain n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3XKJ6_OXYMA) HSP 1 Score: 86.3 bits (212), Expect = 7.290e-20 Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 4 SARPVVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSVWHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFAT 282 SAR VVK + M P+M E A A AL +N E+ +AS +K FE +Y WHC VGR+F +VTHE +CYFY+GQMGVCL+ T Sbjct: 26 SARTVVKFAEMDPDMLEFAQST-------AISALENNTDEKDIASYLKREFENLYQPTWHCIVGRHFSSYVTHEKKCYCYFYIGQMGVCLWKT 111
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: A0A067CKL0_SAPPC (Dynein light chain n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CKL0_SAPPC) HSP 1 Score: 85.5 bits (210), Expect = 8.520e-20 Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 4 SARPVVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSV-WHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFATA 285 S +PVVK STM ++ + I +VAQ A+ EQ +A+ IK FE Y + WHC VGRN C+VTHE +KF YFY+GQM + LFATA Sbjct: 5 SVKPVVKNSTMDQDLLDEVI-------WVAQAAIESEVNEQHIAAKIKKHFELKYHGMLWHCCVGRNMACYVTHEQSKFLYFYIGQMAIVLFATA 92
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: A0A485KBJ8_9STRA (Dynein light chain n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KBJ8_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.710e-19 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 10 RPVVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSV-WHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFATA 285 +PV+K STM ++ + I +VAQ A+ + EQ +A+ IK FE Y + WHC VGRN C+VTHE +KF YFY+GQM V +FATA Sbjct: 7 KPVIKNSTMDQDLLDEVI-------WVAQAAIESESNEQFIAAKIKRHFELKYHGMLWHCCVGRNMACYVTHEQSKFLYFYIGQMAVVIFATA 92
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Match: A0A0G4I172_9ALVE (Dynein light chain n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I172_9ALVE) HSP 1 Score: 81.3 bits (199), Expect = 3.680e-18 Identity = 44/89 (49.44%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 16 VVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSAFETMYPSVWHCFVGRNFGCFVTHEHTKFCYFYVGQMGVCLFAT 282 V+K S M M AI AQ A EQ +AS +K+AFE + WHCFVGRNF +VTHE ++CYFYVGQM VCLF T Sbjct: 7 VIKISNMDDAMLALAISK-------AQYAQEHCPNEQEIASYMKNAFEAEHEPTWHCFVGRNFASYVTHEKGRYCYFYVGQMAVCLFKT 88 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1281.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1281.4.2 >prot_P-wetherbeei_contig1281.4.2 ID=prot_P-wetherbeei_contig1281.4.2|Name=mRNA_P-wetherbeei_contig1281.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=96bp MSARPVVKASTMPPEMQEAAIQAGGHLLFVAQDALRDNNIEQAVASSIKSback to top mRNA from alignment at P-wetherbeei_contig1281:6354..7403+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1281.4.2 ID=mRNA_P-wetherbeei_contig1281.4.2|Name=mRNA_P-wetherbeei_contig1281.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1050bp|location=Sequence derived from alignment at P-wetherbeei_contig1281:6354..7403+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1281:6354..7403+ >mRNA_P-wetherbeei_contig1281.4.2 ID=mRNA_P-wetherbeei_contig1281.4.2|Name=mRNA_P-wetherbeei_contig1281.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=288bp|location=Sequence derived from alignment at P-wetherbeei_contig1281:6354..7403+ (Phaeothamnion wetherbeei SAG_119_79)back to top |