mRNA_P-wetherbeei_contig12777.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12777.1.1
Unique NamemRNA_P-wetherbeei_contig12777.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: D7FV64_ECTSI (Actin-related protein 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV64_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 4.850e-160
Identity = 222/269 (82.53%), Postives = 245/269 (91.08%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPSGHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVEKPG 807
            V D GTGFVKVGYAGENFPRSIFPS+VGRP+LRAEE FQ+ + LKDIMCGD AAAV ASLETSYPV NGI++NW+DME LW+YTF+EKL I+PS HKILLTEPPLNPTKNRE M++  FEKFGF A NVSIQA+LTLYAQ GLL GVVVD GDGVSHV+PVYDG+VP NLIRRLDVAGRH+TRYLIKLLLLRGYAFNR+ADFET+RQ+KE+LCYVA+DI  ERRLAQETTVLEESYTLPDGRVIK+GRERFEAPEPLF PSL+DVE PG
Sbjct:   14 VCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQ-GLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPG 281
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: A0A835YLL4_9STRA (Actin-related protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL4_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 3.330e-155
Identity = 217/269 (80.67%), Postives = 239/269 (88.85%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPSGHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVEKPG 807
            V D GTGFVKVG AGENFPR IFPS++GRP+LRAEEV Q+D+ LKDIMCGDEAAA  ASL+T+YPVENGI+KNW DME LW+YTF EKLK+DP+ HKILLTEPPLNP++NRE M +  FE FGF A NVSIQAILTLYAQ GL  GVVVD GDGVSHV+PVYDGYVP NLI RLDVAGRHITRY+IKLLLLRGYAFNR+ADFETVRQ+KE+LCYVA DI  ERRLAQETTVLEE+Y LPDGRVIK+GRERFEAPEPLF P+LIDVEKPG
Sbjct:   11 VCDNGTGFVKVGVAGENFPRFIFPSLIGRPILRAEEVLQRDVVLKDIMCGDEAAAARASLDTTYPVENGIIKNWADMEELWKYTFHEKLKVDPAAHKILLTEPPLNPSRNRERMCERMFEGFGFGAVNVSIQAILTLYAQ-GLQTGVVVDTGDGVSHVIPVYDGYVPQNLICRLDVAGRHITRYMIKLLLLRGYAFNRTADFETVRQIKEKLCYVAADIQAERRLAQETTVLEETYELPDGRVIKVGRERFEAPEPLFNPALIDVEKPG 278
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: A0A8J2WZI9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZI9_9STRA)

HSP 1 Score: 416 bits (1069), Expect = 3.500e-143
Identity = 203/269 (75.46%), Postives = 231/269 (85.87%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPSGHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVEKPG 807
            V D GTGFVKVGYA ENFPRSIFPSMVGRP+LRAEE   +D+ LK++MCGDEAAAV  SL+ SYPVENGIVK+W+DME LW YTF EKL IDP  +KI+LTEPP+NP  NR+ ++   FE +GF   NVSIQA+LTLYAQ GLL G VVD GDGV+HVVPV+DG+VP NLIRRLDVAGRH+TRYLIKLLLLRGYAFNR+ADFETVRQ+KE+ CYVA+D+N ERRLAQETTVLE ++TLPDGRVIK+GRERFEAPE LF PSLIDVE  G
Sbjct:   12 VCDNGTGFVKVGYASENFPRSIFPSMVGRPILRAEEAISEDVTLKEVMCGDEAAAVRMSLDCSYPVENGIVKDWDDMELLWNYTFYEKLGIDPKDYKIMLTEPPMNPLANRKKLVTAMFELYGFGHCNVSIQAMLTLYAQ-GLLTGCVVDTGDGVTHVVPVFDGFVPQNLIRRLDVAGRHVTRYLIKLLLLRGYAFNRTADFETVRQIKEKFCYVAHDVNIERRLAQETTVLETTHTLPDGRVIKLGRERFEAPECLFDPSLIDVESKG 279
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: A0A7R9U9K1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9K1_9STRA)

HSP 1 Score: 406 bits (1044), Expect = 2.520e-139
Identity = 200/269 (74.35%), Postives = 227/269 (84.39%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPSGHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVEKPG 807
            V D GTGFVKVGYAGENFPR IFPS+VGRPVLRAEEV   +I LKDIMCGD+A     SLE SYP+ENGIVKNW+DMEHLW YTF EK++I+PS H+ILLTEPP+NP +NR+  ++  FEK+GFAA NVSIQA+LTLYAQ GLL GVVVD GDGV+HVVPV+DG+VP  LIRRLDVAGR +T YLIKLLLLRGY+FN SAD ETVR +KE  CYVA DI+ ERRLAQETTVLE+ YTLPDGR+IK+GRERFEAPE LF P L+DVE  G
Sbjct:   12 VCDNGTGFVKVGYAGENFPRFIFPSLVGRPVLRAEEVIDDEIQLKDIMCGDDARRARGSLECSYPIENGIVKNWDDMEHLWNYTFYEKMQINPSEHQILLTEPPMNPKENRQKFVERMFEKYGFAACNVSIQAMLTLYAQ-GLLTGVVVDTGDGVTHVVPVFDGFVPAELIRRLDVAGRKVTDYLIKLLLLRGYSFNHSADRETVRAIKEEHCYVALDIDAERRLAQETTVLEKEYTLPDGRIIKLGRERFEAPEALFSPHLVDVETVG 279
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: K3W8L9_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W8L9_GLOUD)

HSP 1 Score: 400 bits (1029), Expect = 3.770e-137
Identity = 198/270 (73.33%), Postives = 230/270 (85.19%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPS-GHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVEKPG 807
            V D GTGFVK G+A ENFP+ IFPS+VGRP+LRAEE  QKDI LKDIM GDEAAAV ++LE SYPVENGIVKNW+DME LW YTF E+L I+PS GH+ILLTEPPLNP +NRE +++  FEK+GF   N++ QA+LTLYAQ G++ GVV+D GDGV+HVVPVY+GYVP +LI RLDVAGRHIT+YLIKLLLLRGYAFNR+ADFETVRQ+KE+LCYVA +   ER+LA ETTVLEESY LPDGR+IK+ RERFEAPE LF PSLIDVE  G
Sbjct:    9 VCDNGTGFVKCGFAAENFPKCIFPSLVGRPILRAEEAVQKDILLKDIMFGDEAAAVRSNLEISYPVENGIVKNWDDMEKLWDYTFKERLGINPSAGHRILLTEPPLNPKRNREKLVEMMFEKYGFEGTNITTQAMLTLYAQ-GIVTGVVIDTGDGVTHVVPVYEGYVPQHLICRLDVAGRHITQYLIKLLLLRGYAFNRTADFETVRQIKEKLCYVAYEPQAERKLANETTVLEESYELPDGRLIKLERERFEAPEALFNPSLIDVEGAG 277
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: A0A7S2FY88_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FY88_9STRA)

HSP 1 Score: 397 bits (1019), Expect = 1.630e-135
Identity = 201/268 (75.00%), Postives = 223/268 (83.21%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAA--VAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPSGHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVE 798
            V D GTGFVKVGYAGENFPRSIFPSMVGRP+LRAEE    ++ LK+IM GDEA+A  V  SLE +YPVE GIVKNWEDM HLW YTF EKL I PS +KILLTEPP+NP  NR+ ++ + FE +GF   N SIQA+LTLYAQ GL  GVV+D GDGVSHVVPV+DGYVP NLI+RL+VAGRHIT YLIKLLLLRGYAFNR+ADFETVRQ+KE+ CY A DI QERRLA ETTVLEESYTLPDGRVIKIGRERFEA E +F P LIDVE
Sbjct:   11 VCDNGTGFVKVGYAGENFPRSIFPSMVGRPILRAEEAVSDNVFLKEIMVGDEASAPGVRHSLECTYPVEEGIVKNWEDMHHLWNYTFYEKLGIQPSDYKILLTEPPMNPLNNRKNLVTSMFETYGFDQVNCSIQAMLTLYAQ-GLFTGVVLDTGDGVSHVVPVFDGYVPTNLIKRLNVAGRHITSYLIKLLLLRGYAFNRTADFETVRQIKEKFCYAAYDIAQERRLALETTVLEESYTLPDGRVIKIGRERFEACEAMFNPDLIDVE 277
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: A0A8K1CC38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CC38_PYTOL)

HSP 1 Score: 399 bits (1024), Expect = 6.370e-134
Identity = 196/270 (72.59%), Postives = 231/270 (85.56%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPS-GHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVEKPG 807
            V D GTGFVKVG+A ENFP+ IFPS+VGRP+LRAEE  Q+DI L+DIM GDEAAAV ++LE SYPVENGIVKNW+DME LW YTF E+L I+P+ GH+ILLTEPPLNP +NRE + +  FEK+GF   N++ QA+LTLYAQ G++ GVV+D GDGV+HVVPVY+GYVP +LI RLDVAGRHIT+YLIKLLLLRGYAFNR+ADFETVRQ+KE+ CYVA D   ER+LA ETTVLEE+Y LPDGR+I++GRERFEAPE LFQPSLIDVE  G
Sbjct:  183 VCDNGTGFVKVGFAAENFPKCIFPSLVGRPILRAEEAVQRDILLQDIMFGDEAAAVRSNLEISYPVENGIVKNWDDMEKLWDYTFKERLGINPADGHRILLTEPPLNPKRNREKLTEIMFEKYGFEGCNITTQAMLTLYAQ-GIVTGVVIDTGDGVTHVVPVYEGYVPQHLICRLDVAGRHITQYLIKLLLLRGYAFNRTADFETVRQIKEKHCYVAYDPAAERKLASETTVLEETYELPDGRIIRLGRERFEAPEALFQPSLIDVEGAG 451
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: F0XXQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXQ8_AURAN)

HSP 1 Score: 414 bits (1063), Expect = 7.220e-134
Identity = 203/269 (75.46%), Postives = 229/269 (85.13%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPSGHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVEKPG 807
            V D GTGFVKVGYA ENFPRSIFPSMVGRP+LRAEE    D+ LK++MCGDEAAAV  SL+ +YPVENGIVK+W+DME LW YTF EKL IDP  +KI+LTEPP+NP  NR  ++   FE +G++  NVSIQA+LTLYAQ GLL G VVD GDGV+HVVPVYDG+VP NLIRRLDVAGRH+TRYLIKLLLLRGYAFNR+ADFETVRQ+KE+ CYVA+DI  ERRLAQETTVLE ++TLPDGRVIKIGRERFEAPE LF PSLIDVE  G
Sbjct:  717 VCDNGTGFVKVGYASENFPRSIFPSMVGRPILRAEEAISDDVTLKEVMCGDEAAAVRMSLDCTYPVENGIVKDWDDMELLWNYTFYEKLGIDPKDYKIMLTEPPMNPLANRRKLVTAMFELYGYSYCNVSIQAMLTLYAQ-GLLTGCVVDTGDGVTHVVPVYDGFVPQNLIRRLDVAGRHVTRYLIKLLLLRGYAFNRTADFETVRQIKEKFCYVAHDIAVERRLAQETTVLEATHTLPDGRVIKIGRERFEAPEALFDPSLIDVESKG 984
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: A0A2R5GT49_9STRA (Actin-like protein, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GT49_9STRA)

HSP 1 Score: 392 bits (1007), Expect = 7.470e-134
Identity = 195/269 (72.49%), Postives = 225/269 (83.64%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPSGHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVEKPG 807
            V D GTGFVKVGYAG NFP  +FPSMVGRP LRAE    +   LKD+MCGDEAAAV  +L   YPVENGIV+NWEDM+HLW YTF +KLKIDPSG KI+LTE PLNPT NR+  I+T FEK+GF AA+++IQA+L LYAQ GLL GVVVD GDGV+HVVPVY+G+VP +LIRRL+VAGRHITRY+IKLLLLRGY+FNR+ADFETVR++KE+L YVA DI +ER LAQETTVL E+Y LPDG VIK GRERFEAPE LFQPSL+D +  G
Sbjct:    6 VCDNGTGFVKVGYAGTNFPEGVFPSMVGRPQLRAEMESIEGTELKDVMCGDEAAAVRFALRIGYPVENGIVQNWEDMQHLWDYTFHDKLKIDPSGKKIMLTEAPLNPTANRKITIETMFEKYGFEAAHMAIQAMLVLYAQ-GLLTGVVVDSGDGVTHVVPVYEGFVPGHLIRRLNVAGRHITRYMIKLLLLRGYSFNRTADFETVREIKEKLAYVALDIKKERALAQETTVLVETYQLPDGTVIKAGRERFEAPEALFQPSLVDCDGEG 273
[Close]
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Match: A0A024T9P2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024T9P2_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 3.350e-133
Identity = 192/269 (71.38%), Postives = 223/269 (82.90%), Query Frame = 1 
Query:    1 VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCGDEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPSGHKILLTEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVDCGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSADFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRERFEAPEPLFQPSLIDVEKPG 807
            V D GTGFVK G+A ENFPR +FPS+VGRP+LRAEE    D+ LKD+MCGDEAA V ++L+ SYPVENGIVKNWEDME LW YTF E+L+++P   +ILLTEPPLNP  NRE +++  FEK+GF   ++SIQA+LTLYAQ G+  GVV+D GDGVSHVVPVY+G+VP +LIRRLDVAGRHIT+YLIKLLLLRGYAFNR+ADFETVRQ+KER CY A D   ERRLA ETTVLEE+Y LPDGRVIK+GRERFEA E LFQP LI VE  G
Sbjct:    9 VCDNGTGFVKCGFAAENFPRHVFPSLVGRPILRAEEAINSDVILKDVMCGDEAAYVRSNLQISYPVENGIVKNWEDMEKLWDYTFHERLQVNPKEMRILLTEPPLNPKANREKLVEIMFEKYGFDGTHISIQAMLTLYAQ-GMRTGVVIDSGDGVSHVVPVYEGFVPQHLIRRLDVAGRHITQYLIKLLLLRGYAFNRTADFETVRQIKERHCYTALDPVVERRLALETTVLEETYELPDGRVIKLGRERFEAAEALFQPHLIGVEGLG 276
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12777.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV64_ECTSI4.850e-16082.53Actin-related protein 2 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLL4_9STRA3.330e-15580.67Actin-related protein 2 n=1 Tax=Tribonema minus Ta... [more]
A0A8J2WZI9_9STRA3.500e-14375.46Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U9K1_9STRA2.520e-13974.35Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K3W8L9_GLOUD3.770e-13773.33Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A7S2FY88_9STRA1.630e-13575.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8K1CC38_PYTOL6.370e-13472.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0XXQ8_AURAN7.220e-13475.46Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2R5GT49_9STRA7.470e-13472.49Actin-like protein, putative n=1 Tax=Hondaea ferme... [more]
A0A024T9P2_9STRA3.350e-13371.38Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12777contigP-wetherbeei_contig12777:12..1655 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FV64
Preferred nameACTR2
PFAMsActin
Model size807
Max annot lvl2759|Eukaryota
KEGG koko:K17260
KEGG Pathwayko04138,ko04530,map04138,map04530
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000147,GO:0000166,GO:0000280,GO:0000323,GO:0000902,GO:0000904,GO:0000910,GO:0001667,GO:0001775,GO:0002009,GO:0002102,GO:0002252,GO:0002253,GO:0002262,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003006,GO:0003008,GO:0003674,GO:0003824,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005856,GO:0005884,GO:0005885,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006972,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007017,GO:0007018,GO:0007049,GO:0007059,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007369,GO:0007399,GO:0007610,GO:0007611,GO:0007612,GO:0008064,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008154,GO:0008306,GO:0008356,GO:0008582,GO:0009267,GO:0009272,GO:0009605,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009790,GO:0009825,GO:0009888,GO:0009987,GO:0009991,GO:0010026,GO:0010033,GO:0010035,GO:0010038,GO:0010090,GO:0010243,GO:0010631,GO:0010638,GO:0010720,GO:0010769,GO:0010770,GO:0010927,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0014069,GO:0014070,GO:0015629,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016331,GO:0016344,GO:0016462,GO:0016477,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019953,GO:0022008,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030041,GO:0030097,GO:0030099,GO:0030139,GO:0030141,GO:0030154,GO:0030175,GO:0030218,GO:0030435,GO:0030437,GO:0030476,GO:0030478,GO:0030479,GO:0030554,GO:0030587,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031143,GO:0031152,GO:0031252,GO:0031334,GO:0031344,GO:0031346,GO:0031410,GO:0031505,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031982,GO:0031983,GO:0032060,GO:0032258,GO:0032271,GO:0032273,GO:0032279,GO:0032501,GO:0032502,GO:0032505,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033206,GO:0033365,GO:0033554,GO:0034097,GO:0034101,GO:0034293,GO:0034314,GO:0034341,GO:0034613,GO:0034622,GO:0034774,GO:0035162,GO:0035578,GO:0035639,GO:0035902,GO:0035983,GO:0035984,GO:0036094,GO:0036230,GO:0038093,GO:0038094,GO:0038096,GO:0040007,GO:0040008,GO:0040011,GO:0042119,GO:0042221,GO:0042244,GO:0042330,GO:0042493,GO:0042546,GO:0042582,GO:0042592,GO:0042594,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043299,GO:0043312,GO:0043327,GO:0043933,GO:0043934,GO:0043935,GO:0044085,GO:0044087,GO:0044089,GO:0044396,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044464,GO:0044703,GO:0044764,GO:0044782,GO:0045010,GO:0045055,GO:0045087,GO:0045132,GO:0045202,GO:0045229,GO:0045321,GO:0045335,GO:0045471,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045887,GO:0045927,GO:0046677,GO:0046689,GO:0046903,GO:0046907,GO:0048013,GO:0048285,GO:0048308,GO:0048311,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048638,GO:0048639,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048814,GO:0048856,GO:0048869,GO:0048870,GO:0048872,GO:0050000,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050877,GO:0050890,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051258,GO:0051301,GO:0051303,GO:0051305,GO:0051321,GO:0051489,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051653,GO:0051654,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0060205,GO:0060215,GO:0060271,GO:0060284,GO:0060319,GO:0060429,GO:0060491,GO:0060998,GO:0060999,GO:0061001,GO:0061003,GO:0061024,GO:0061640,GO:0061645,GO:0061825,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070590,GO:0070591,GO:0070726,GO:0070727,GO:0070887,GO:0070925,GO:0071236,GO:0071310,GO:0071345,GO:0071346,GO:0071407,GO:0071417,GO:0071437,GO:0071495,GO:0071496,GO:0071554,GO:0071555,GO:0071840,GO:0071852,GO:0071940,GO:0071944,GO:0072553,GO:0072665,GO:0090066,GO:0090130,GO:0090132,GO:0090558,GO:0090626,GO:0090702,GO:0097159,GO:0097305,GO:0097367,GO:0097435,GO:0097458,GO:0097708,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098794,GO:0098805,GO:0098813,GO:0098858,GO:0098984,GO:0099080,GO:0099081,GO:0099120,GO:0099172,GO:0099175,GO:0099503,GO:0099512,GO:0099513,GO:0099568,GO:0099572,GO:0101002,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0140013,GO:1900006,GO:1901265,GO:1901363,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902903,GO:1902905,GO:1903046,GO:1904396,GO:1904398,GO:1904813,GO:2000026
Exons5
Evalue7.96e-161
EggNOG OGsCOG5277@1|root,KOG0677@2759|Eukaryota
Ec32 ortholog descriptionactin-related protein 2
Ec32 orthologEc-12_007380.1
DescriptionArp2/3 complex-mediated actin nucleation
Cds size807
COG categoryZ
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185960.7736104-CDS-P-wetherbeei_contig12777:11..1551683185960.7736104-CDS-P-wetherbeei_contig12777:11..155Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12777 12..155 -
1683185960.7864149-CDS-P-wetherbeei_contig12777:491..6061683185960.7864149-CDS-P-wetherbeei_contig12777:491..606Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12777 492..606 -
1683185960.804048-CDS-P-wetherbeei_contig12777:787..9151683185960.804048-CDS-P-wetherbeei_contig12777:787..915Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12777 788..915 -
1683185960.8157384-CDS-P-wetherbeei_contig12777:1109..12591683185960.8157384-CDS-P-wetherbeei_contig12777:1109..1259Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12777 1110..1259 -
1683185960.8238068-CDS-P-wetherbeei_contig12777:1385..16551683185960.8238068-CDS-P-wetherbeei_contig12777:1385..1655Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12777 1386..1655 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12777.1.1prot_P-wetherbeei_contig12777.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12777 12..1655 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12777.1.1

>prot_P-wetherbeei_contig12777.1.1 ID=prot_P-wetherbeei_contig12777.1.1|Name=mRNA_P-wetherbeei_contig12777.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
VLDGGTGFVKVGYAGENFPRSIFPSMVGRPVLRAEEVFQKDIALKDIMCG
DEAAAVAASLETSYPVENGIVKNWEDMEHLWRYTFDEKLKIDPSGHKILL
TEPPLNPTKNRETMIQTTFEKFGFAAANVSIQAILTLYAQQGLLRGVVVD
CGDGVSHVVPVYDGYVPHNLIRRLDVAGRHITRYLIKLLLLRGYAFNRSA
DFETVRQMKERLCYVANDINQERRLAQETTVLEESYTLPDGRVIKIGRER
FEAPEPLFQPSLIDVEKPG
back to top

mRNA from alignment at P-wetherbeei_contig12777:12..1655-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12777.1.1 ID=mRNA_P-wetherbeei_contig12777.1.1|Name=mRNA_P-wetherbeei_contig12777.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1644bp|location=Sequence derived from alignment at P-wetherbeei_contig12777:12..1655- (Phaeothamnion wetherbeei SAG_119_79)
GTGCTGGATGGAGGAACAGGATTTGTGAAAGTCGGCTACGCGGGAGAGAA
CTTTCCCAGGTCTATCTTTCCCTCCATGGTCGGCCGGCCGGTGCTGCGAG
CAGAGGAGGTCTTTCAGAAAGACATTGCGCTGAAGGACATCATGTGCGGG
GACGAAGCGGCGGCGGTGGCGGCGTCCCTCGAAACGAGCTACCCCGTGGA
GAACGGCATTGTCAAGAACTGGGAGGACATGGAGCACCTCTGGAGGTACA
CCTTCGATGAGAAGCTCAAGGTAACTAACAGTTCCCTTTTTGCGCATAAA
AGTAGACGCTTCTTCCGTTTTCGCTGCGAGGCAGATCAAAGTGTTCTCGT
GGAAGAGCTTACTTTGCTTCGCCGTCGCCGGCGCTGCCTCATGCAGATCG
ACCCATCAGGGCACAAGATCCTCTTGACGGAGCCGCCGCTCAACCCGACG
AAGAACCGCGAGACAATGATCCAAACGACTTTTGAGAAGTTCGGATTCGC
CGCAGCCAACGTCTCCATTCAGGCCATCCTGACGCTGTATGCACAGGTGC
GGAGAAGGGAGAGGGAGAGGTTTTCTGTCTTACGATTGCCTCTGATCCGT
TGTAGTACTGTATCGACAGAATTCGACTTTGGGGTCGACCACGGGAGTGC
TCCACTGTGTTGCGAGCAAAGTAATGGCGCCGACAGCTGCCGTTCACATA
AGCTCTTTTCTGATTCGCTCGCATGATGTGATGGGACAAGCAGGGCCTGC
TGCGTGGCGTAGTGGTGGACTGCGGCGACGGCGTGAGCCACGTGGTGCCA
GTCTACGATGGCTACGTGCCGCACAACCTTATCCGCCGCCTTGACGTCGC
CGGCAGACACATCACAAGGTGCGCAGCTGTCAAATTAATTTTGCCACGTT
TGCCCTTGCCGTTAAGCTTTTTTCCTTGATTCGCGCCAGATTTTTGGTGG
AAGCAAATTGGTGGCTCGGCTTCGCTCAGGGAAACAGTGCGTCAATTGCA
ATGATGCCAAGGGTTCTTCGTATGTCTATCTCTGCACGATTGATCGCAGG
TATTTGATCAAGCTGCTGCTGCTGCGCGGTTACGCCTTCAACCGATCGGC
GGACTTTGAGACCGTCCGACAGATGAAGGAGCGCCTCTGCTACGTCGCCA
ACGACATCAACCAGGTCAGACACCATCCTCCTGAGGCGCCTTCTTGTTCA
TCTCCGCTTTTTCTTTGGTATCGACCGATATGGCAGCATTTTATTCAAGT
GCCTCTACTGAGGCGGCTTAAACGGGTCTGTGTCCACTTTCTAGTGAATT
GCGGGACAAAAGAATGGAACGGGGTCTTTAAACCTTGGAGCAGCCATTTT
TCTTTCGGCAATAGTTAGAGGAGGACTTCCTTTGTTCCGCTTGCAGTATT
AGCAAACCTGAACTCCTGAGATCTGTCTCAGTTTCCGGCGTTCCTGCGAT
CGACCTTGTTGCCTGCCTTTACTCCCCCTTTCGCCTGGAATATTGCGCAG
GAGCGACGGTTAGCTCAGGAGACGACGGTGCTGGAGGAGTCGTACACGCT
GCCGGACGGGCGCGTCATCAAGATAGGGCGGGAGCGCTTTGAGGCACCGG
AGCCGCTCTTCCAGCCCAGCCTCATCGACGTCGAGAAGCCAGGT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig12777:12..1655-

>mRNA_P-wetherbeei_contig12777.1.1 ID=mRNA_P-wetherbeei_contig12777.1.1|Name=mRNA_P-wetherbeei_contig12777.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig12777:12..1655- (Phaeothamnion wetherbeei SAG_119_79)
GTGCTGGATGGAGGAACAGGATTTGTGAAAGTCGGCTACGCGGGAGAGAA
CTTTCCCAGGTCTATCTTTCCCTCCATGGTCGGCCGGCCGGTGCTGCGAG
CAGAGGAGGTCTTTCAGAAAGACATTGCGCTGAAGGACATCATGTGCGGG
GACGAAGCGGCGGCGGTGGCGGCGTCCCTCGAAACGAGCTACCCCGTGGA
GAACGGCATTGTCAAGAACTGGGAGGACATGGAGCACCTCTGGAGGTACA
CCTTCGATGAGAAGCTCAAGATCGACCCATCAGGGCACAAGATCCTCTTG
ACGGAGCCGCCGCTCAACCCGACGAAGAACCGCGAGACAATGATCCAAAC
GACTTTTGAGAAGTTCGGATTCGCCGCAGCCAACGTCTCCATTCAGGCCA
TCCTGACGCTGTATGCACAGCAGGGCCTGCTGCGTGGCGTAGTGGTGGAC
TGCGGCGACGGCGTGAGCCACGTGGTGCCAGTCTACGATGGCTACGTGCC
GCACAACCTTATCCGCCGCCTTGACGTCGCCGGCAGACACATCACAAGGT
ATTTGATCAAGCTGCTGCTGCTGCGCGGTTACGCCTTCAACCGATCGGCG
GACTTTGAGACCGTCCGACAGATGAAGGAGCGCCTCTGCTACGTCGCCAA
CGACATCAACCAGGAGCGACGGTTAGCTCAGGAGACGACGGTGCTGGAGG
AGTCGTACACGCTGCCGGACGGGCGCGTCATCAAGATAGGGCGGGAGCGC
TTTGAGGCACCGGAGCCGCTCTTCCAGCCCAGCCTCATCGACGTCGAGAA
GCCAGGT
back to top