mRNA_P-wetherbeei_contig12763.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12763.1.1
Unique NamemRNA_P-wetherbeei_contig12763.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: A0A6H5KZ38_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ38_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 1.510e-55
Identity = 99/225 (44.00%), Postives = 136/225 (60.44%), Query Frame = 1
Query:    1 QLYKRFFDWIVRRINAAIETKSHRLRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEARTGMFALLDEVGQWKDHTESELVSCFDRAMAAHPHWIPGKTCVYGIGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAA-------ARR----CEINKLFGIRHYAGDVCYNAAGWVRKDEKRV 642
            ++Y+R F WIV ++N +IE  +  L + ILDIYGFE+F++N FEQFCIN+ NEKLQQY+++HTIRAEQ+DYEAEG+EW H++YFNNK VCDMIE R G+ +LLDEV  +KD+    LV+ ++R MA H H+ PG+  VYG G G                                   A       AR      +  ++FGIRH+AG+V Y A  ++ K+  R+
Sbjct:  434 EVYRRLFSWIVDKVNRSIECATEGLTMGILDIYGFEIFDSNDFEQFCINYVNEKLQQYFIDHTIRAEQDDYEAEGVEWEHVDYFNNKTVCDMIEGRHGLLSLLDEVSSYKDNDGKVLVNRYNRVMANHDHYFPGEEAVYGTGYGRRRSSGSVHGFNNGSGSGKASLKATSSGRAGAGADAVYSRVTVAREDKHFLDAKQMFGIRHFAGNVTYAADRFIEKNADRL 658          
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: D8LTJ6_ECTSI (Myosin IA, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ6_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 9.390e-55
Identity = 115/228 (50.44%), Postives = 153/228 (67.11%), Query Frame = 1
Query:    1 QLYKRFFDWIVRRINAAIETKSHRLRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEARTGMFALLDEVGQWKDHTESELVSCFDRAMAAHPHWIPGKTCVYGIGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------KAAARRCEINKLFGIRHYAGDVCYNAAGWVRKDEKRV 642
            ++Y+R F WIV ++N +IE  +  L + ILDIYGFE+F++N FEQFCIN+ NEKLQQY+++HTIRAEQ+DYEAEG+EW H++YFNNK VCDMIE R G+ +LLDEV  +KD+    LV+ ++R MA H H+ PG+  VYG G G              XXXXXXXXXXXXXXXXXXX              +      +  ++FGIRH+AG+V Y A  ++ K+  R+
Sbjct:   85 EVYRRLFGWIVDKVNRSIECATEGLTMGILDIYGFEIFDSNDFEQFCINYVNEKLQQYFIDHTIRAEQDDYEAEGVEWEHVDYFNNKTVCDMIEGRHGLLSLLDEVSSYKDNDGKVLVNRYNRVMANHDHYFPGEEAVYGTGYGRRRSSASVNGFSNGXXXXXXXXXXXXXXXXXXXXXXXDAVYSRVTVARGDKHFLDAKQMFGIRHFAGNVTYAADRFIEKNADRL 312          
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: A0A835YR46_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR46_9STRA)

HSP 1 Score: 164 bits (414), Expect = 6.200e-43
Identity = 88/229 (38.43%), Postives = 124/229 (54.15%), Query Frame = 1
Query:    1 QLYKRFFDWIVRRINAAIETKSHR---------LRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEARTGMFALLDEVGQWKDHTESELVSCFDRAMAAHPHWIPGKTCVYGIGA-----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAARRCEINKLFGIRHYAGDVCYNA 609
            +LY+R FDW+V ++N AIE ++           L + +LD+YGFE+F+TNGFEQ CIN+ANEKLQQ+++   I+AEQ+DY AEGI W  I YF+N  V DMIE +TG+ +LLDE   ++D T ++LV+  ++A A  P++I G+  +YG  +                 G                                    A   +I K+FGIRHYAGDV Y A
Sbjct:  353 ELYRRVFDWLVGKVNIAIEAETGSGHGHGQQDLLTMGVLDVYGFEIFDTNGFEQLCINYANEKLQQFFISRVIKAEQDDYRAEGITWSDIVYFDNAGVLDMIEGKTGLLSLLDEQCAYRDSTSTDLVNRLNKACAERPYYISGRGLLYGDRSQSPPAPPSKAAGKDAEPGAASSTSTMANAHPLPPNGRRGSTPDRGSVRMGRNGIAATGDITKMFGIRHYAGDVAYTA 581          
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: F0YAR1_AURAN (Myosin motor domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAR1_AURAN)

HSP 1 Score: 153 bits (387), Expect = 1.520e-39
Identity = 70/128 (54.69%), Postives = 97/128 (75.78%), Query Frame = 1
Query:    1 QLYKRFFDWIVRRINAAIETKSHRLRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEART---GMFALLDEVGQWKDHTESELVSCFDRAM 375
            + YKR FDW+VR+IN AI        + ILDI+GFE+F+ NGFEQFCIN+ NEKLQQY++E T++AEQE+Y AEG+ W+ IEYF+NK+VCD+IEA+    G+ ALLDE G +K    ++L++ FD+ +
Sbjct:  366 ETYKRLFDWVVRQINQAILPAHAATSIGILDIFGFEIFDANGFEQFCINYVNEKLQQYFIELTLKAEQEEYAAEGVPWQDIEYFDNKVVCDLIEAKKPTLGVLALLDEAGAFKGADTAKLMTKFDQQL 493          
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: A0A158PDC2_ANGCS (Uncharacterized protein n=2 Tax=Angiostrongylus TaxID=6312 RepID=A0A158PDC2_ANGCS)

HSP 1 Score: 149 bits (375), Expect = 1.030e-37
Identity = 75/146 (51.37%), Postives = 101/146 (69.18%), Query Frame = 1
Query:    4 LYKRFFDWIVRRINAAI---ETKSHRLRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEART--GMFALLDEV-----GQWKDHTESELVSCFDRAMAAHPHWIPGKTC 411
            +Y R FD++V  +N AI   E     L + ILDIYGFE+FE NGFEQFCINF NEKLQQ ++E T++AEQE+Y  E I W+ IEYFNNK+VCD+IEA+   G+  +LD+V     GQ  +  +S+L++  +RA + HPH+ PG  C
Sbjct:  355 IYARIFDYLVTSVNNAIRVAEGLDMSLSIGILDIYGFEIFENNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVREKIRWQEIEYFNNKVVCDLIEAKKPPGIMCVLDDVCAQNHGQ-SEGVDSQLLTSLNRAFSQHPHYQPGAEC 499          
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: UPI001CFE8317 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFE8317)

HSP 1 Score: 144 bits (364), Expect = 1.480e-36
Identity = 69/146 (47.26%), Postives = 104/146 (71.23%), Query Frame = 1
Query:    4 LYKRFFDWIVRRINAAIETKSHRLRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEART--GMFALLDEVGQWKDHTES----ELVSCFDRAMAAHPHWIPGKTCVYGI 423
            LY R FDW+V+RIN A++TK ++L L +LDIYGFE+F+ NGFEQFCIN+ NEKLQQ +++ T++AEQ++Y+ EGI+W  I++FNNKIVCD+IE +   G+F++LD+        E+    E      R +  +PH++ G+T  + +
Sbjct:  349 LYSRMFDWLVKRINDAMDTKKNQLILAVLDIYGFEIFDKNGFEQFCINYVNEKLQQIFIDLTLKAEQDEYQQEGIKWEPIQFFNNKIVCDLIEEKNPPGIFSILDDTCNTTHSMEARAADEKFLTRLREVVNNPHFV-GRTSEFSV 493          
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: A0A6S7ITH6_PARCT (Unconventional myosin-Ie-like isoform X2 (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7ITH6_PARCT)

HSP 1 Score: 144 bits (363), Expect = 1.820e-36
Identity = 70/138 (50.72%), Postives = 97/138 (70.29%), Query Frame = 1
Query:    4 LYKRFFDWIVRRINAAIETKSHRLRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEART---GMFALLDEVGQWKDHTESE-----LVSCFDRAMAAHPHW 393
            LY R FD++V+R+N A++T    + + ILDIYGFE+FE NGFEQFCINF NEKLQQ ++E T++AEQE+Y  EGI+W  I+YFNNKIVCD+IEA+    G+  +LD+V     H + E     L+   + A++ H H+
Sbjct:  355 LYSRIFDYLVKRVNMAMKTDKEEMNIGILDIYGFEIFEKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIKWTPIDYFNNKIVCDLIEAKRPQPGIMCILDDVCATM-HAQGEGADMKLLQKLEGAISTHQHY 491          
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: A0A4X3P2C5_PRIPA (Hum-1 n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A4X3P2C5_PRIPA)

HSP 1 Score: 145 bits (365), Expect = 2.040e-36
Identity = 73/144 (50.69%), Postives = 99/144 (68.75%), Query Frame = 1
Query:    4 LYKRFFDWIVRRINAAIETKSH-RLRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEART--GMFALLDEVGQWKDHTESE-----LVSCFDRAMAAHPHWIPGKTC 411
            +Y R FD++V  +N A+ T  H    + ILDIYGFE+FE NGFEQFCINF NEKLQQ ++E T++AEQE+Y +EGI+W  IEYFNNKIVCD+IE +   G+ +LLD+    ++H +SE      +S  ++A A H H+  G  C
Sbjct:  395 IYSRLFDYLVTSVNKALVTSDHSHSSIGILDIYGFEIFENNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVSEGIKWTEIEYFNNKIVCDLIENKRPPGIMSLLDDTCA-QNHGQSEGVDHQFLSTLNKACAHHEHYKSGADC 537          
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: D2W159_NAEGR (Myosin n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2W159_NAEGR)

HSP 1 Score: 144 bits (363), Expect = 4.170e-36
Identity = 64/106 (60.38%), Postives = 87/106 (82.08%), Query Frame = 1
Query:    4 LYKRFFDWIVRRINAAIETKSHRLRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEART--GMFALLDE 315
            LY R FDW+V+RIN A++TK + L L +LDIYGFE+F+ NGFEQFCIN+ NEKLQQ +++ T++AEQE+Y  EGI+W  I+YFNNKIVCD+IE +   G+F++LD+
Sbjct:  349 LYARLFDWLVKRINDAMDTKKNTLILAVLDIYGFEIFDKNGFEQFCINYVNEKLQQIFIDLTLKAEQEEYTQEGIKWEPIQYFNNKIVCDLIEEKNPPGIFSILDD 454          
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Match: A0A6P8IQI7_ACTTE (unconventional myosin-Ic-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IQI7_ACTTE)

HSP 1 Score: 144 bits (363), Expect = 4.180e-36
Identity = 71/146 (48.63%), Postives = 99/146 (67.81%), Query Frame = 1
Query:    4 LYKRFFDWIVRRINAAIETKSHR---LRLNILDIYGFEVFETNGFEQFCINFANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEAR-TGMFALLDEV----GQWKDHTESELVSCFDRAMAAHPHWIPGKTCVY 417
            +Y R F W+VR IN +++ K H      L +LDIYGFE+F++NGFEQFCIN+ NEKLQQ ++E T+R EQE+Y+ EGIEW  +EYF+NKI+CD+IE +  G+ +LLDE     GQ  D T    ++  + A+  HPH++   T  Y
Sbjct:  375 IYDRLFTWVVRSINGSLQRKKHNSPITLLGLLDIYGFEIFQSNGFEQFCINYCNEKLQQLFIELTLREEQEEYKNEGIEWEPVEYFDNKIICDLIEVKHKGIISLLDEECVRPGQVSDST---FITKLETAIGGHPHFLCHATGDY 517          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12763.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ38_9PHAE1.510e-5544.00Myosin motor domain-containing protein n=1 Tax=Ect... [more]
D8LTJ6_ECTSI9.390e-5550.44Myosin IA, putative n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YR46_9STRA6.200e-4338.43P-loop containing nucleoside triphosphate hydrolas... [more]
F0YAR1_AURAN1.520e-3954.69Myosin motor domain-containing protein (Fragment) ... [more]
A0A158PDC2_ANGCS1.030e-3751.37Uncharacterized protein n=2 Tax=Angiostrongylus Ta... [more]
UPI001CFE83171.480e-3647.26uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A6S7ITH6_PARCT1.820e-3650.72Unconventional myosin-Ie-like isoform X2 (Fragment... [more]
A0A4X3P2C5_PRIPA2.040e-3650.69Hum-1 n=2 Tax=Pristionchus pacificus TaxID=54126 R... [more]
D2W159_NAEGR4.170e-3660.38Myosin n=1 Tax=Naegleria gruberi TaxID=5762 RepID=... [more]
A0A6P8IQI7_ACTTE4.180e-3648.63unconventional myosin-Ic-like isoform X1 n=2 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12763contigP-wetherbeei_contig12763:591..1757 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LTJ6
Preferred nameMYO19
PFAMsChitin_synth_2,Cyt-b5,DEK_C,IQ,Myosin_TH1,Myosin_head,PX
Model size642
Max annot lvl2759|Eukaryota
KEGG rclassRC00005
KEGG koko:K00698,ko:K10352,ko:K10356,ko:K10357,ko:K17481
KEGG ReactionR02335
KEGG Pathwayko00520,ko04530,map00520,map04530
Hectar predicted targeting categoryother localisation
GOsGO:0000146,GO:0000166,GO:0000278,GO:0000281,GO:0000302,GO:0000910,GO:0001891,GO:0001931,GO:0003674,GO:0003774,GO:0003779,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005826,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006928,GO:0006935,GO:0006950,GO:0006970,GO:0006971,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007033,GO:0007049,GO:0007154,GO:0008064,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008360,GO:0009267,GO:0009581,GO:0009582,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010243,GO:0010639,GO:0014070,GO:0014074,GO:0015629,GO:0016020,GO:0016043,GO:0016050,GO:0016459,GO:0016460,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022402,GO:0022603,GO:0022604,GO:0022607,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030038,GO:0030048,GO:0030139,GO:0030554,GO:0030587,GO:0030832,GO:0030833,GO:0030837,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030898,GO:0031033,GO:0031034,GO:0031152,GO:0031154,GO:0031254,GO:0031268,GO:0031270,GO:0031333,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032009,GO:0032060,GO:0032153,GO:0032155,GO:0032271,GO:0032272,GO:0032502,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032796,GO:0032956,GO:0032970,GO:0032982,GO:0032991,GO:0033036,GO:0033043,GO:0033275,GO:0033298,GO:0033554,GO:0034461,GO:0034622,GO:0035639,GO:0036094,GO:0040011,GO:0042221,GO:0042330,GO:0042493,GO:0042542,GO:0042594,GO:0042623,GO:0042641,GO:0042802,GO:0042803,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044464,GO:0044764,GO:0044877,GO:0045177,GO:0045179,GO:0045335,GO:0046677,GO:0046683,GO:0046847,GO:0046983,GO:0048519,GO:0048523,GO:0048856,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050982,GO:0051015,GO:0051017,GO:0051128,GO:0051129,GO:0051179,GO:0051301,GO:0051493,GO:0051494,GO:0051591,GO:0051606,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0060327,GO:0060328,GO:0061572,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0070252,GO:0070938,GO:0071496,GO:0071840,GO:0071889,GO:0071944,GO:0090066,GO:0090702,GO:0097159,GO:0097204,GO:0097367,GO:0097435,GO:0097708,GO:0098630,GO:0098743,GO:0099120,GO:0099568,GO:0099738,GO:0110053,GO:0120025,GO:0120031,GO:0120036,GO:1901265,GO:1901363,GO:1901698,GO:1901700,GO:1902903,GO:1902904,GO:1903047,GO:1990753
Exons3
Evalue1.54e-55
EggNOG OGsCOG5022@1|root,KOG0160@2759|Eukaryota,KOG0164@2759|Eukaryota
Ec32 ortholog descriptionMyosin head, motor domain
Ec32 orthologEc-02_005850.1
EC2.4.1.16
Descriptionmicrotubule motor activity
Cds size642
COG categoryZ
CAZyGT2
BRITEko00000,ko00001,ko01000,ko01003,ko01009,ko03019,ko03029,ko03036,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185960.4354186-CDS-P-wetherbeei_contig12763:590..7601683185960.4354186-CDS-P-wetherbeei_contig12763:590..760Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12763 591..760 +
1683185960.447454-CDS-P-wetherbeei_contig12763:1081..11721683185960.447454-CDS-P-wetherbeei_contig12763:1081..1172Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12763 1082..1172 +
1683185960.4563346-CDS-P-wetherbeei_contig12763:1376..17571683185960.4563346-CDS-P-wetherbeei_contig12763:1376..1757Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12763 1377..1757 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12763.1.1prot_P-wetherbeei_contig12763.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12763 591..1757 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12763.1.1

>prot_P-wetherbeei_contig12763.1.1 ID=prot_P-wetherbeei_contig12763.1.1|Name=mRNA_P-wetherbeei_contig12763.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp
QLYKRFFDWIVRRINAAIETKSHRLRLNILDIYGFEVFETNGFEQFCINF
ANEKLQQYWLEHTIRAEQEDYEAEGIEWRHIEYFNNKIVCDMIEARTGMF
ALLDEVGQWKDHTESELVSCFDRAMAAHPHWIPGKTCVYGIGAGGGGLGG
GGGGGRRGSVAAVAGNAAAVAVAAAADKAAARRCEINKLFGIRHYAGDVC
YNAAGWVRKDEKRV
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mRNA from alignment at P-wetherbeei_contig12763:591..1757+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12763.1.1 ID=mRNA_P-wetherbeei_contig12763.1.1|Name=mRNA_P-wetherbeei_contig12763.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1167bp|location=Sequence derived from alignment at P-wetherbeei_contig12763:591..1757+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCTGTACAAGCGGTTCTTCGACTGGATCGTCCGGCGCATCAACGCGGC CATCGAGACTAAGAGCCACCGTCTCCGCCTCAACATCCTCGACATCTATG GCTTCGAGGTGTTCGAGACGAACGGCTTCGAGCAGTTCTGCATCAACTTC GCCAACGAGAAGCTGCAGCAGTGAGTAAGACTATTAAGAGACTCAGATTG AATCTGCAGCTTGCTCCGGATTCTGCATCTCAGTTGCTGGCTGCCCAGCA AGCTAGCTGTATTGGCTAGCTGCAGTCGCACTGCCGTTTATAGGTAGGGC TGGCGGGCGCTATTGCTGCTGGCTGGGGCCCTGCTTCCTCTGCCCGCTGA CATAAGCTGCCACCGCTGCCTCCTGCCACTACCTGTTTTTTGCTGTTGCT TGGCGCTGCCAACCACTGCTTCTTTCATGCGCCAAGTGGTTGCTATTCTG ACAAATTTGTGATTGCTCTCACTAATCGTTCAATCTCGCAGGTACTGGCT GGAGCACACCATCCGGGCCGAGCAGGAGGACTACGAAGCGGAGGGCATCG AATGGCGCCACATCGAGTACTTCAACAACAAGGTGAGTTGATCGGTCACA TTGCCTGGCATCCCTTTATTTCTTCCGCCGCCGCCGGCGCTTCCGCCGCC GCCCTTGTCGTGGACGGCGCCACCGGCGTTCCTTCGTTGATGGGCGTTGC GATCCCGCGAATGCCAAAACTTTTCTCACATACTCTCTCTCGTTCGATTC TTCCTTCTCTCTTTCCTTCGATTCCCTCCAAATCAGATCGTCTGCGATAT GATAGAGGCGCGAACGGGGATGTTCGCGCTCCTGGACGAAGTCGGCCAGT GGAAGGATCATACGGAGAGCGAACTGGTCTCGTGCTTTGACCGCGCCATG GCCGCCCATCCCCACTGGATCCCGGGCAAGACGTGCGTCTACGGTATCGG CGCTGGCGGCGGCGGTCTTGGCGGGGGCGGCGGCGGCGGCAGGCGGGGGT CCGTGGCGGCGGTGGCTGGGAACGCGGCGGCGGTGGCCGTAGCAGCGGCG GCTGACAAGGCGGCGGCGCGACGGTGCGAAATCAACAAGCTGTTCGGCAT CCGCCACTACGCCGGGGACGTCTGCTACAACGCCGCCGGCTGGGTAAGAA AAGACGAGAAGAGGGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12763:591..1757+

>mRNA_P-wetherbeei_contig12763.1.1 ID=mRNA_P-wetherbeei_contig12763.1.1|Name=mRNA_P-wetherbeei_contig12763.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig12763:591..1757+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCTGTACAAGCGGTTCTTCGACTGGATCGTCCGGCGCATCAACGCGGC
CATCGAGACTAAGAGCCACCGTCTCCGCCTCAACATCCTCGACATCTATG
GCTTCGAGGTGTTCGAGACGAACGGCTTCGAGCAGTTCTGCATCAACTTC
GCCAACGAGAAGCTGCAGCAGTACTGGCTGGAGCACACCATCCGGGCCGA
GCAGGAGGACTACGAAGCGGAGGGCATCGAATGGCGCCACATCGAGTACT
TCAACAACAAGATCGTCTGCGATATGATAGAGGCGCGAACGGGGATGTTC
GCGCTCCTGGACGAAGTCGGCCAGTGGAAGGATCATACGGAGAGCGAACT
GGTCTCGTGCTTTGACCGCGCCATGGCCGCCCATCCCCACTGGATCCCGG
GCAAGACGTGCGTCTACGGTATCGGCGCTGGCGGCGGCGGTCTTGGCGGG
GGCGGCGGCGGCGGCAGGCGGGGGTCCGTGGCGGCGGTGGCTGGGAACGC
GGCGGCGGTGGCCGTAGCAGCGGCGGCTGACAAGGCGGCGGCGCGACGGT
GCGAAATCAACAAGCTGTTCGGCATCCGCCACTACGCCGGGGACGTCTGC
TACAACGCCGCCGGCTGGGTAAGAAAAGACGAGAAGAGGGTC
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