mRNA_P-wetherbeei_contig12684.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: Q3BKI1_9PROT (Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=Q3BKI1_9PROT) HSP 1 Score: 291 bits (746), Expect = 5.680e-96 Identity = 150/201 (74.63%), Postives = 158/201 (78.61%), Query Frame = 1 Query: 1 PQVIPIYCNRCGFGPPVGVTQPSTCSWLDHSVSGLMQRTERPIQTRFRYAYTYRLKLARYTKSLTHYTKGTPSGL-RPPTVCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPGPRSLATTYGVSVDVLSSRYLDVSVPWVRFLPLCIR 600 PQ+IP + NR GFGPPVGVT PSTC W+DHSVSGLM T RPIQTRFR AYTYRLKLA YT SLTHYTKGTPS R PT CR VSG++SLPLSGCFSPFPHGT SLSV EYLGLE G PMFRQDFTCPALLK + T TGLSPA A LS F + HWPGPRSLATT GVSVDVLSS YLDVSV VR L LCI+ Sbjct: 7 PQIIPDFFNRRGFGPPVGVTPPSTCPWIDHSVSGLMHATRRPIQTRFRCAYTYRLKLAAYTNSLTHYTKGTPSPFKRAPTACRHSVSGTVSLPLSGCFSPFPHGTSSLSVTEEYLGLEDGPPMFRQDFTCPALLKADTRFTPTGLSPAMARLSRRFRLCKYQHWPGPRSLATTNGVSVDVLSSGYLDVSVRPVRLLNLCIQ 207
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: UPI001A08AA19 (Uncharacterized protein n=1 Tax=Pseudorhizobium halotolerans TaxID=1233081 RepID=UPI001A08AA19) HSP 1 Score: 284 bits (727), Expect = 2.450e-93 Identity = 146/185 (78.92%), Postives = 151/185 (81.62%), Query Frame = 1 Query: 76 SWLDHSVSGLMQRT----------ERPIQTRFRYAYTYRLKLARYTKSLTHYTKGTPSGLRPPTVCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPGPRSLATTYGVSVDVLSSRYLDVSVPWVRFLPLCIR 600 SW + S LM R+ RP+QTRFRYAYTYRLKLA YTKSLTHYTKGTPS LR PTVCR PVSGSISLP SGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDN+CST TGLSP A LS F FIP CHWPGPRSLATT GVSVDVLS RYLDVSVP VRFL LCI+ Sbjct: 7 SWCYPTFSLLMARSLGFGSNATYYGRPVQTRFRYAYTYRLKLACYTKSLTHYTKGTPSPLRAPTVCRHPVSGSISLPSSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNQCSTPTGLSPTIAKLSNLFGFIPDCHWPGPRSLATTCGVSVDVLSCRYLDVSVPCVRFLSLCIQ 191
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: A0A6A5L965_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L965_LUPAL) HSP 1 Score: 298 bits (764), Expect = 2.330e-92 Identity = 161/242 (66.53%), Postives = 167/242 (69.01%), Query Frame = 1 Query: 112 RTERPIQTRFRYAYTYRLKLARYTKSLTHYTKGTPSGLRPPTVCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPGPRSLATTYGVSVDVLSSRYLDVSVPWVRFLPLCIRK*DTLYQCLET*AVPKNNLNFLGI*GGFPHSEIHGSKLIR--SSPQLIAAYHVLHRLCMPRHPPIALTTLNRSHCQCSS 831 + E TRFR AYTYRLKLA YTKSLTHYTKGTPSGLRPPT CR PVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECST TGLSP A LS F FIPHCHWPGPRSLATT GVSVDVLS R L C PH + G + R S+ +YHVLHRLCMPRHPP ALTTL+RSHCQCSS Sbjct: 585 KEESSASTRFRCAYTYRLKLASYTKSLTHYTKGTPSGLRPPTACRHPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTSTGLSPILARLSNLFDFIPHCHWPGPRSLATTCGVSVDVLSCRNL-----------FC------------------------------PHGQ--GLRTARRISADGRAPSYHVLHRLCMPRHPPNALTTLDRSHCQCSS 783
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: A0A6A5L4G5_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L4G5_LUPAL) HSP 1 Score: 205 bits (522), Expect = 8.430e-58 Identity = 111/150 (74.00%), Postives = 115/150 (76.67%), Query Frame = 1 Query: 121 RPIQTRFRYAYTYRLKLARYTKSLTHYTKGTPSGLRP-PTVCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPGPRSLATTYGVSVDVLSSRYLDVSV 567 RPIQTRFR A TYRLKLA Y+KSLTHYTKGTPS PT CR PVSG++SLPLSGCFSPFPHGT +LSV EYLGLE G PMFRQ FTCPALL D TGLSPA A LS F HWPGPRSLATT GVSVDVLSS YLDVSV Sbjct: 5 RPIQTRFRCASTYRLKLAAYSKSLTHYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALLVDCFRFIRTGLSPAMARLSRRFRLCRSNHWPGPRSLATTSGVSVDVLSSGYLDVSV 154
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: A0A6A5L866_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L866_LUPAL) HSP 1 Score: 206 bits (525), Expect = 7.500e-57 Identity = 111/150 (74.00%), Postives = 115/150 (76.67%), Query Frame = 1 Query: 121 RPIQTRFRYAYTYRLKLARYTKSLTHYTKGTPSGLRP-PTVCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPGPRSLATTYGVSVDVLSSRYLDVSV 567 RPIQTRFR A TYRLKLA Y+KSLTHYTKGTPS PT CR PVSG++SLPLSGCFSPFPHGT +LSV EYLGLE G PMFRQ FTCPALL D TGLSPA A LS F HWPGPRSLATT GVSVDVLSS YLDVSV Sbjct: 5 RPIQTRFRCASTYRLKLAAYSKSLTHYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALLVDRFRFIRTGLSPAMARLSRRFRLCRSNHWPGPRSLATTSGVSVDVLSSGYLDVSV 154
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: A0A6A5L6S4_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L6S4_LUPAL) HSP 1 Score: 206 bits (525), Expect = 7.730e-57 Identity = 111/150 (74.00%), Postives = 115/150 (76.67%), Query Frame = 1 Query: 121 RPIQTRFRYAYTYRLKLARYTKSLTHYTKGTPSGLRP-PTVCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPGPRSLATTYGVSVDVLSSRYLDVSV 567 RPIQTRFR A TYRLKLA Y+KSLTHYTKGTPS PT CR PVSG++SLPLSGCFSPFPHGT +LSV EYLGLE G PMFRQ FTCPALL D TGLSPA A LS F HWPGPRSLATT GVSVDVLSS YLDVSV Sbjct: 5 RPIQTRFRCASTYRLKLAAYSKSLTHYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALLVDRFRFIRTGLSPAMARLSRRFRLCRSNHWPGPRSLATTSGVSVDVLSSGYLDVSV 154
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: D1CZ21_9HYPH (Uncharacterized protein (Fragment) n=7 Tax=Brucella TaxID=234 RepID=D1CZ21_9HYPH) HSP 1 Score: 184 bits (466), Expect = 2.500e-55 Identity = 91/117 (77.78%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 232 PTVCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPGPRSLATTYGVSVDVLSSRYLDVSVPWVRF 582 PTVCR PVSG++SLP SG FSPFPHGT SLSVMHEYLGL+ G PMFRQDFTCPALLKD STCTGLSP S FHFI HWPGPRSLATT GVS DVLSS YLDVSVP VRF Sbjct: 19 PTVCRHPVSGTVSLPSSGYFSPFPHGTGSLSVMHEYLGLDRGRPMFRQDFTCPALLKDFCYSTCTGLSPTSVEFSNSFHFIHKSHWPGPRSLATTSGVSFDVLSSGYLDVSVPQVRF 135
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: A0A2S2PQL9_SCHGA (Uncharacterized protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PQL9_SCHGA) HSP 1 Score: 137 bits (346), Expect = 2.100e-36 Identity = 84/163 (51.53%), Postives = 95/163 (58.28%), Query Frame = 1 Query: 163 LKLARYTKSLTHYTKGTPSGLR-PPTVCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPG----------------PRSLATTYGVSVDVLSSRYLDVSVPWVRFLPLCIR 600 + LA KSLTHYTKGTPS L+ PT CR+PVS ++SLP SGCFSPFPHGT SLSV EYL E G P+FRQDFTCPALL L P + +H + WPG P S ATT G+SVD S YLDVSV VRF L I+ Sbjct: 1 VNLATECKSLTHYTKGTPSPLKGAPTACRRPVSETVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQDFTCPALLV-------VPLVPQRGFRIQGYHLL----WPGFPSRFANHTAKKYKAHPISFATTLGISVDFCSCSYLDVSVRRVRFPHLWIQ 152
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: A0A2P2J3P6_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J3P6_RHIMU) HSP 1 Score: 130 bits (328), Expect = 2.410e-35 Identity = 62/75 (82.67%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 328 MHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPGPRSLATTYGVSVDVLSSRY 552 MHEYLGLESGLPMFRQDFTCPALLKDN+CST GLSP+ A S F FI HCHWPGPRSLATT GVSVDVLSS Y Sbjct: 1 MHEYLGLESGLPMFRQDFTCPALLKDNDCSTRKGLSPSMADFSKSFRFIHHCHWPGPRSLATTSGVSVDVLSSGY 75
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Match: A0A6A5L1U4_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L1U4_LUPAL) HSP 1 Score: 143 bits (361), Expect = 3.620e-35 Identity = 109/275 (39.64%), Postives = 127/275 (46.18%), Query Frame = 1 Query: 1 PQVIPIYCNRCGFGPPVGVTQPSTCSWLDHSVSGLMQRTERPIQTRFRYAYTYRLKLARYTKSLTHYTKGTPSGLRPPTVCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNECSTCTGLSPAKAGLSIPFHFIPHCHWPGPRSLATTYGVSVDVLSSRYLDVSVPWVRFLPLCIRK*DTLYQCLET*AVPKNNLNFLGI*GGFPHSEIHGSKLIRSSPQLIAAYHVLHRLCMPRHPPIALTTLNRSHCQC 825 P VI N FGPPVGVT PS+C+WLDHSVSGL RTERP+QTRFR A TYRLKLAR KSLTHYTKGT R P + ++ LPL +S+ + G P P G P++ PF +PH SR D ++ V GGFPHSEI GSKL+RSSP+LIAAYHVL RL PRHPP AL L+RS +C Sbjct: 442 PHVIQDLFNGHWFGPPVGVTPPSSCTWLDHSVSGLKPRTERPVQTRFRCASTYRLKLARNFKSLTHYTKGT----------RSPRT-NLGLPLF------------VSIRFQ-TGFHVSRPTRVLALNRPV----------RGCHPSRR----PFQTVPH------------------QTGSRQSDTAIRKVE--------------------------------GGFPHSEIPGSKLVRSSPRLIAAYHVLLRLSAPRHPPNALKALDRSRDRC 628 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12684.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12684.5.1 >prot_P-wetherbeei_contig12684.5.1 ID=prot_P-wetherbeei_contig12684.5.1|Name=mRNA_P-wetherbeei_contig12684.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp MQRTERPIQTRFRYAYTYRLKLARYTKSLTHYTKGTPSGLRPPTVCRQPVback to top mRNA from alignment at P-wetherbeei_contig12684:1121..1952- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12684.5.1 ID=mRNA_P-wetherbeei_contig12684.5.1|Name=mRNA_P-wetherbeei_contig12684.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=832bp|location=Sequence derived from alignment at P-wetherbeei_contig12684:1121..1952- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12684:1121..1952- >mRNA_P-wetherbeei_contig12684.5.1 ID=mRNA_P-wetherbeei_contig12684.5.1|Name=mRNA_P-wetherbeei_contig12684.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig12684:1121..1952- (Phaeothamnion wetherbeei SAG_119_79)back to top |