mRNA_P-wetherbeei_contig1267.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1267.1.2
Unique NamemRNA_P-wetherbeei_contig1267.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: A0A835ZG55_9STRA (FAD-binding PCMH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG55_9STRA)

HSP 1 Score: 330 bits (847), Expect = 2.820e-108
Identity = 157/223 (70.40%), Postives = 185/223 (82.96%), Query Frame = 1 
Query:    4 VLEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRYV 672
            + E++I N+RW FCL  LLP+SAAFD +L  + + T  TR+ AP KH++RVA VQ QV+ W   G +  MCT RPGWQ MSLR GKYK T +NI +DLFDILE+DT  + VRVEPMV+MGQLT AINPLGWTLPVVPELDDLT+GGLI+GVGVETSSH++GLFQHIC  FEVVLAD SVV CSA++RPDLFYN+PWSHGTLGFVVSA IQ+VPCKP+V+LRYV
Sbjct:   11 IFEYVINNHRWAFCLI-LLPISAAFDAWLKLKHVYTFWTRERAPAKHKERVAEVQRQVRVWAESGAKGTMCTARPGWQTMSLRIGKYKATSRNIKIDLFDILEVDTVNKCVRVEPMVTMGQLTAAINPLGWTLPVVPELDDLTIGGLIAGVGVETSSHIYGLFQHICREFEVVLADASVVTCSATQRPDLFYNVPWSHGTLGFVVSATIQMVPCKPYVRLRYV 232
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: A0A6P7Y973_9AMPH (delta(24)-sterol reductase n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7Y973_9AMPH)

HSP 1 Score: 291 bits (744), Expect = 2.980e-94
Identity = 137/221 (61.99%), Postives = 176/221 (79.64%), Query Frame = 1 
Query:    7 LEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRY 669
            LE++I ++RW F   FLLPLS  FD+Y + R+ + +    SAP+ H QRV ++Q+QV++W   G +  MCTGRPGW  +SLR GKYK+THKNI ++L DILE+DTKR+VVRVEP+VSMGQLT  +N +GWTLPVVPELDDLTVGGLI G G+E+SSH HGLFQH+C +FE+VLADGS V C+ +E  DLFY +PWS GTLGF+V+AE++I+P K +VKLRY
Sbjct:   23 LEYVIVHHRWIFVCLFLLPLSLIFDVYYYLRAWV-VFKMCSAPKLHNQRVKQIQKQVQDWKKEGAKTFMCTGRPGWLTVSLRVGKYKKTHKNIMINLLDILEVDTKRQVVRVEPLVSMGQLTALLNSIGWTLPVVPELDDLTVGGLIMGTGIESSSHNHGLFQHVCLAFELVLADGSFVRCTPTENSDLFYAVPWSCGTLGFLVAAEVKIIPAKKYVKLRY 242
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: A0A3L8SQF0_CHLGU (FAD-binding PCMH-type domain-containing protein n=8 Tax=Neognathae TaxID=8825 RepID=A0A3L8SQF0_CHLGU)

HSP 1 Score: 291 bits (746), Expect = 2.670e-93
Identity = 134/221 (60.63%), Postives = 177/221 (80.09%), Query Frame = 1 
Query:    7 LEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRY 669
            LE ++ ++RW F  FFL+PLS  FD+Y H R+   +    SAP +H QRV  +QEQV+EW   G +R MCTGRPGW  +SLR GKYK+THKNI ++L D+LE+DT+R+VVRVEP+VSMGQLT  +NP+GWT+PVVPELDDLTVGGLI G G+E+SSH++GLFQH C ++E+VLADGS+V C+ +E  DLFY +PWS GTLGF+V+AEI+++P K +VK++Y
Sbjct:   32 LEAVLVHHRWVFVCFFLMPLSILFDIYYHLRAW-AVWRLHSAPRQHAQRVRHIQEQVREWKKEGSKRYMCTGRPGWLTVSLRVGKYKKTHKNIMINLMDVLEVDTERQVVRVEPLVSMGQLTAYLNPMGWTIPVVPELDDLTVGGLIMGTGIESSSHIYGLFQHTCVAYELVLADGSLVRCTPTENSDLFYAVPWSCGTLGFLVAAEIKMIPAKKYVKIQY 251
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: UPI0013AFA55D (delta(24)-sterol reductase n=1 Tax=Etheostoma spectabile TaxID=54343 RepID=UPI0013AFA55D)

HSP 1 Score: 285 bits (730), Expect = 4.550e-93
Identity = 133/221 (60.18%), Postives = 174/221 (78.73%), Query Frame = 1 
Query:    7 LEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRY 669
            L+++I + RW F   FLLPLS  FD+Y + R+ L +    SAP+ H QRV  +Q QV+EW   G +  MCTGRPGW  +SLR GKYK+THKNI +++ DILE+DTKR+VVRVEP+ +MGQ+T  +  +GWTLPV+PELDDLTVGGL+ G G+E+SSH++GLFQHIC +FE+VLADGS+V C+  E PDLF+ +PWS GTLGF+V+AEI+I+P KP+VKLRY
Sbjct:   23 LDYVIVHQRWIFVCLFLLPLSVIFDVYYYVRAWL-IFKMCSAPKLHDQRVRDIQRQVREWRKAGSKTHMCTGRPGWLTVSLRVGKYKKTHKNIMINMMDILEVDTKRQVVRVEPLANMGQVTALLTSIGWTLPVLPELDDLTVGGLVMGTGIESSSHIYGLFQHICVAFELVLADGSLVRCTEEENPDLFHAVPWSCGTLGFLVAAEIKIIPAKPWVKLRY 242
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: S4RG23_PETMA (24-dehydrocholesterol reductase n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RG23_PETMA)

HSP 1 Score: 290 bits (743), Expect = 6.230e-93
Identity = 137/221 (61.99%), Postives = 177/221 (80.09%), Query Frame = 1 
Query:    7 LEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRY 669
            LE+++  +RW F   FLLPLS  FD Y   R+ L +    SAP++H QRV  +Q+QV++W A G +  MCTGRPGW  +SLR GKYK+THKNI ++L DILE+DTKR++VRVEP+V+MGQ+T  ++ +GWTLPVVPELDDLTVGGLI G G+ETSSH++GLFQHIC SFE+VLADGS+V CS +E  DLFY +PWS+GTLGF+V+AE++IVP + +VKLRY
Sbjct:   23 LEYVLVQHRWLFVCLFLLPLSVLFDAYYFIRAWL-VFRMCSAPKQHDQRVRDIQKQVRQWRAEGGQTYMCTGRPGWLTVSLRVGKYKKTHKNIMINLMDILEVDTKRQIVRVEPLVNMGQVTSLLSSIGWTLPVVPELDDLTVGGLIMGTGIETSSHIYGLFQHICVSFELVLADGSLVRCSETENSDLFYAVPWSYGTLGFLVAAEVRIVPARHYVKLRY 242
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: A0A7K9REK3_9PASS (DHC24 reductase (Fragment) n=10 Tax=Neognathae TaxID=8825 RepID=A0A7K9REK3_9PASS)

HSP 1 Score: 289 bits (740), Expect = 9.310e-93
Identity = 134/221 (60.63%), Postives = 175/221 (79.19%), Query Frame = 1 
Query:    7 LEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRY 669
            LE ++ ++RW F  FFL+PLS  FD+Y H R+   +    SAP +H QRV  +QEQV+EW   G  R MCTGRPGW  +SLR GKYK+THKNI ++L DILE+D++R+VVRVEP+V+MGQLT  +NP+GWT+PVVPELDDLTVGGLI G G+E+SSH++GLFQH C ++E+VLADGS+V CS +E  DLFY +PWS GTLGF+V+AEI+++P K +VK+ Y
Sbjct:    2 LEAVLVHHRWVFVCFFLMPLSILFDIYYHLRAW-AVWRLHSAPRQHAQRVRPIQEQVREWKKEGSRRYMCTGRPGWLTVSLRVGKYKKTHKNIMINLMDILEVDSERKVVRVEPLVTMGQLTAHLNPMGWTIPVVPELDDLTVGGLIMGTGIESSSHIYGLFQHTCVAYELVLADGSLVRCSPTENSDLFYAVPWSCGTLGFLVAAEIKMIPAKKYVKIHY 221
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: UPI0008546E25 (delta(24)-sterol reductase n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008546E25)

HSP 1 Score: 288 bits (738), Expect = 3.330e-92
Identity = 136/220 (61.82%), Postives = 174/220 (79.09%), Query Frame = 1 
Query:   10 EHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRY 669
            EH+I ++RW F   FLLPLS  FDLY + R+ L +    SAP+ H +RV  +QEQV++W   G ++ MCTGRPGW  +SLR GKYK THKNI ++L DILE+DTKR+VVRVEP+V+MGQ+T  +N +GWTLPV+PELDDLTVGGLI G G+E+SSH +GLFQHIC ++E+VLADGS+V C+ +E  DLFY +PWS GTLGF+V+AEI+IVP K +VKL Y
Sbjct:   24 EHVIVHHRWIFVCLFLLPLSVVFDLYYYVRTWL-VFKMCSAPKLHDRRVKEIQEQVRQWKTDGAKKFMCTGRPGWLTVSLRVGKYKSTHKNIMINLMDILEVDTKRQVVRVEPLVNMGQVTALLNSIGWTLPVLPELDDLTVGGLIMGTGIESSSHNYGLFQHICLAYELVLADGSLVRCTPTENSDLFYAVPWSCGTLGFLVAAEIKIVPAKKYVKLHY 242
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: A0A2P4S965_BAMTH (FAD-binding PCMH-type domain-containing protein n=1 Tax=Bambusicola thoracicus TaxID=9083 RepID=A0A2P4S965_BAMTH)

HSP 1 Score: 282 bits (722), Expect = 6.130e-92
Identity = 131/221 (59.28%), Postives = 172/221 (77.83%), Query Frame = 1 
Query:    7 LEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRY 669
            LE ++ ++RW F  FFL+PLS  FD+Y   R+   +    SAP  H QRV  +QEQV+EW   G  R MCTGRPGW  +SLR GKYK+THKNI ++L D+LE+D +R+VVRVEP+V+MGQLT  +NP+GWT+PVVPELDDLTVGGLI G G+E+SSH++GLFQH C ++E+VLADGS+V CS +E  DLFY +PWS GTLGF+V+AEI+++P K +++L Y
Sbjct:   23 LEAVLVHHRWIFVCFFLMPLSILFDVYYQLRAW-AVRRMHSAPRLHGQRVRHIQEQVREWKDEGGRRYMCTGRPGWLTVSLRVGKYKKTHKNIMINLMDVLEVDGERQVVRVEPLVTMGQLTAYLNPMGWTIPVVPELDDLTVGGLIMGTGIESSSHIYGLFQHTCMAYELVLADGSLVRCSPTENSDLFYAVPWSCGTLGFLVAAEIKMIPAKKYIRLHY 242
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: A0A672FP59_SALFA (FAD-binding PCMH-type domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FP59_SALFA)

HSP 1 Score: 282 bits (722), Expect = 8.650e-92
Identity = 131/221 (59.28%), Postives = 174/221 (78.73%), Query Frame = 1 
Query:    7 LEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRY 669
            L+++I + RW F   FLLPLS  FD+Y + R+ + +    SAP+KH QRV  +Q QV+EW   G +  MCTGRPGW  +SLR GKYK+THKNI ++L DILE+DT+R+VVRVEP+ +MGQ+T  +N +GWTLPV+PELDDLTVGGL+ G G+E+SSH++GLFQHIC ++E+VLADGS+V C+  E  DLF+ +PWS GTLGF+V+AEI+I+P KP+VKL Y
Sbjct:   23 LDYVIVHQRWIFVCLFLLPLSVLFDVYYYMRAWI-IFKMCSAPKKHDQRVRDIQRQVREWKKEGSKTRMCTGRPGWLTVSLRVGKYKKTHKNIMINLMDILEVDTERQVVRVEPLANMGQVTACLNSVGWTLPVLPELDDLTVGGLVMGTGIESSSHIYGLFQHICVAYELVLADGSLVRCTEEENSDLFHAVPWSCGTLGFLVAAEIKIIPAKPWVKLHY 242
[Close]
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Match: UPI0001CBBD26 (delta(24)-sterol reductase n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBBD26)

HSP 1 Score: 287 bits (735), Expect = 9.650e-92
Identity = 133/221 (60.18%), Postives = 171/221 (77.38%), Query Frame = 1 
Query:    7 LEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQRVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLFDILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLISGVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHGTLGFVVSAEIQIVPCKPFVKLRY 669
            LE+++ + RW F   FLLP+S  FD+ +  R+ +T     SAP+KH  RV  +Q+QV+EW+  GCE+ MCT RPGW  +S R  KYK TH+ I ++L D+LEIDT+R+ VRVEP+ +MGQ+T  +NPLGWTLPV+PELDDLTVGGLI GVG+ETSSH HGLFQH C S+E+VLADGS+V CS  E PDLFY +PWS+GTLGF+V+AEI+I+P K FVK+ Y
Sbjct:   25 LEYVVVHQRWIFVCLFLLPVSVLFDVLISFRNWITFKM-TSAPKKHDTRVRDIQKQVREWMTDGCEQPMCTARPGWMTVSPRVAKYKHTHRKIQVNLIDVLEIDTERQTVRVEPLATMGQITATLNPLGWTLPVLPELDDLTVGGLIMGVGIETSSHKHGLFQHTCLSYELVLADGSLVKCSKDEDPDLFYAVPWSYGTLGFLVAAEIKIIPAKKFVKIEY 244
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1267.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZG55_9STRA2.820e-10870.40FAD-binding PCMH-type domain-containing protein n=... [more]
A0A6P7Y973_9AMPH2.980e-9461.99delta(24)-sterol reductase n=1 Tax=Microcaecilia u... [more]
A0A3L8SQF0_CHLGU2.670e-9360.63FAD-binding PCMH-type domain-containing protein n=... [more]
UPI0013AFA55D4.550e-9360.18delta(24)-sterol reductase n=1 Tax=Etheostoma spec... [more]
S4RG23_PETMA6.230e-9361.9924-dehydrocholesterol reductase n=1 Tax=Petromyzon... [more]
A0A7K9REK3_9PASS9.310e-9360.63DHC24 reductase (Fragment) n=10 Tax=Neognathae Tax... [more]
UPI0008546E253.330e-9261.82delta(24)-sterol reductase n=1 Tax=Nanorana parker... [more]
A0A2P4S965_BAMTH6.130e-9259.28FAD-binding PCMH-type domain-containing protein n=... [more]
A0A672FP59_SALFA8.650e-9259.28FAD-binding PCMH-type domain-containing protein n=... [more]
UPI0001CBBD269.650e-9260.18delta(24)-sterol reductase n=1 Tax=Saccoglossus ko... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1267contigP-wetherbeei_contig1267:288..1611 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog10224.XP_002740991.1
Preferred nameDHCR24
PFAMsFAD_binding_4
Model size672
Max annot lvl33208|Metazoa
KEGG rclassRC00522,RC01887,RC02419
KEGG koko:K09828
KEGG ReactionR01457,R03689,R05703,R07488,R07493,R07498,R07499,R07507,R11096
KEGG Pathwayko00100,ko01100,ko01110,map00100,map01100,map01110
KEGG ModuleM00101
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000139,GO:0000246,GO:0003006,GO:0003674,GO:0003823,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005829,GO:0005856,GO:0006066,GO:0006508,GO:0006629,GO:0006694,GO:0006695,GO:0006807,GO:0006915,GO:0006950,GO:0006979,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007548,GO:0008104,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008219,GO:0008285,GO:0008610,GO:0009058,GO:0009719,GO:0009725,GO:0009888,GO:0009892,GO:0009987,GO:0010033,GO:0010466,GO:0010467,GO:0010605,GO:0010941,GO:0010951,GO:0012501,GO:0012505,GO:0016020,GO:0016043,GO:0016125,GO:0016126,GO:0016485,GO:0016491,GO:0016627,GO:0016628,GO:0019222,GO:0019538,GO:0019899,GO:0022402,GO:0022414,GO:0023052,GO:0030162,GO:0030539,GO:0031090,GO:0031323,GO:0031324,GO:0031638,GO:0031639,GO:0031984,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0033036,GO:0033218,GO:0033489,GO:0033490,GO:0035556,GO:0042127,GO:0042175,GO:0042221,GO:0042277,GO:0042605,GO:0042981,GO:0042982,GO:0042987,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043281,GO:0043588,GO:0044092,GO:0044238,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045786,GO:0045861,GO:0046165,GO:0046661,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048806,GO:0048856,GO:0050614,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0051604,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0055114,GO:0060255,GO:0060548,GO:0061024,GO:0061458,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0080090,GO:0098588,GO:0098791,GO:0098827,GO:1901214,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:2000116,GO:2000117
Exons4
Evalue1.58e-92
EggNOG OGsCOG0277@1|root,KOG1262@2759|Eukaryota,38BVQ@33154|Opisthokonta,3BJ6S@33208|Metazoa,3CX5C@33213|Bilateria
EC1.3.1.72
Descriptiondelta24-sterol reductase activity
Cds size672
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185956.1283205-CDS-P-wetherbeei_contig1267:287..3981683185956.1283205-CDS-P-wetherbeei_contig1267:287..398Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1267 288..398 -
1683185956.1374261-CDS-P-wetherbeei_contig1267:692..9411683185956.1374261-CDS-P-wetherbeei_contig1267:692..941Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1267 693..941 -
1683185956.1449206-CDS-P-wetherbeei_contig1267:1180..13181683185956.1449206-CDS-P-wetherbeei_contig1267:1180..1318Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1267 1181..1318 -
1683185956.1522744-CDS-P-wetherbeei_contig1267:1437..16111683185956.1522744-CDS-P-wetherbeei_contig1267:1437..1611Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1267 1438..1611 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1267.1.2prot_P-wetherbeei_contig1267.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1267 288..1611 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1267.1.2

>prot_P-wetherbeei_contig1267.1.2 ID=prot_P-wetherbeei_contig1267.1.2|Name=mRNA_P-wetherbeei_contig1267.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
MVLEHLITNYRWFFCLFFLLPLSAAFDLYLHARSLLTLLTRKSAPEKHRQ
RVARVQEQVKEWVAGGCERMMCTGRPGWQAMSLRTGKYKRTHKNIHLDLF
DILEIDTKRRVVRVEPMVSMGQLTRAINPLGWTLPVVPELDDLTVGGLIS
GVGVETSSHVHGLFQHICSSFEVVLADGSVVNCSASERPDLFYNIPWSHG
TLGFVVSAEIQIVPCKPFVKLRYV
back to top

mRNA from alignment at P-wetherbeei_contig1267:288..1611-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1267.1.2 ID=mRNA_P-wetherbeei_contig1267.1.2|Name=mRNA_P-wetherbeei_contig1267.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1324bp|location=Sequence derived from alignment at P-wetherbeei_contig1267:288..1611- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCCTCGAACACCTAATAACCAACTACCGCTGGTTCTTTTGTCTTTT
TTTCCTCCTCCCGCTGTCGGCCGCCTTCGACCTGTACCTACATGCGAGAA
GCTTGCTGACGCTCCTCACGCGCAAGAGCGCCCCAGAAAAGCACCGTCAG
CGCGTAGCTCGTGTGCAGGAACAAGTAAGATTAACGCAAATAATTTTCCC
CGCGTTTGCAGTTTGAATTCTACAAATTCCCAAGCAGACTTTGGATACAA
AGATGACACGAGGGTTTGCATTCCACCGCTGGCGCTTCTCCAGGTGAAGG
AGTGGGTCGCAGGAGGCTGCGAGCGCATGATGTGCACGGGGCGCCCGGGC
TGGCAGGCCATGTCACTCCGCACGGGAAAGTATAAGCGTACACACAAAAA
CATCCATCTGGATCTGTTCGATATCCTCGAGGTAAGGGTGCCTAGAAGCG
TAATGATTGTGTTTTCATGCAGATTGGCACTACGCGTAAGTTCTGAATTT
AGAAGCTTGATGAACGGCTGACTCCGAATCATTGTGCACCGATTACACAG
TCCCATTCTCGTCATGCAGTAGCCTACTAGCATCGGAAAACCGCCATTCA
AACCACAACCCGCTTTCCCCTGTTTTCGCATGGCACGGCACGGAATGGCG
CTCGCGGTTTCACGGCACAGATCGACACCAAGCGGCGCGTGGTGCGTGTG
GAGCCCATGGTTTCGATGGGCCAGCTGACGCGCGCCATCAACCCCCTGGG
CTGGACGCTGCCTGTCGTGCCCGAGCTGGACGATTTGACGGTCGGCGGTC
TCATCTCCGGCGTCGGCGTCGAGACGTCCAGCCACGTCCACGGGCTATTC
CAGCACATCTGCAGCTCCTTCGAGGTGGTGCTCGCTGACGGCTCTGTGGT
CAACTGCTCCGCGAGCGAGGTGGGGTTTTCCGTTGCTGCCGTTTCTTGAC
ATTTTTCTGAGTTTTTGACTGTTGAGACTTGTTATGAGGTTTTGCCTTCT
GACGGGGTTCTTTCCTCGCGCGAAAGGTTTTGGAAATGCTCGCCGGCTAC
CAAGGCGGAATGCTTCCCTCGAGCTCCGCCATTTGGCGTTACATTAGTCC
AGCAAAATGGTAGCATAATCATTGGTTGTTTGATATTTGGGTAAGTTTTA
GTGGCTCGAAAGCTGACGCATCTTGATCTCGCACTCCCGCAATCCATTCC
GCAAAATCGACAGCGACCGGATCTCTTTTACAATATCCCGTGGTCACACG
GCACGCTGGGATTCGTCGTGTCGGCGGAGATCCAGATCGTGCCTTGCAAG
CCCTTCGTCAAGCTCAGGTACGTA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1267:288..1611-

>mRNA_P-wetherbeei_contig1267.1.2 ID=mRNA_P-wetherbeei_contig1267.1.2|Name=mRNA_P-wetherbeei_contig1267.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig1267:288..1611- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCCTCGAACACCTAATAACCAACTACCGCTGGTTCTTTTGTCTTTT
TTTCCTCCTCCCGCTGTCGGCCGCCTTCGACCTGTACCTACATGCGAGAA
GCTTGCTGACGCTCCTCACGCGCAAGAGCGCCCCAGAAAAGCACCGTCAG
CGCGTAGCTCGTGTGCAGGAACAAGTGAAGGAGTGGGTCGCAGGAGGCTG
CGAGCGCATGATGTGCACGGGGCGCCCGGGCTGGCAGGCCATGTCACTCC
GCACGGGAAAGTATAAGCGTACACACAAAAACATCCATCTGGATCTGTTC
GATATCCTCGAGATCGACACCAAGCGGCGCGTGGTGCGTGTGGAGCCCAT
GGTTTCGATGGGCCAGCTGACGCGCGCCATCAACCCCCTGGGCTGGACGC
TGCCTGTCGTGCCCGAGCTGGACGATTTGACGGTCGGCGGTCTCATCTCC
GGCGTCGGCGTCGAGACGTCCAGCCACGTCCACGGGCTATTCCAGCACAT
CTGCAGCTCCTTCGAGGTGGTGCTCGCTGACGGCTCTGTGGTCAACTGCT
CCGCGAGCGAGCGACCGGATCTCTTTTACAATATCCCGTGGTCACACGGC
ACGCTGGGATTCGTCGTGTCGGCGGAGATCCAGATCGTGCCTTGCAAGCC
CTTCGTCAAGCTCAGGTACGTA
back to top